RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ANKRD50Q9ULJ7 1429 aa38.63■■■■□ 3.77
SMAD6-202ENST00000557916 PTPRMP28827 1452 aa38.62■■■■□ 3.77
SMAD6-202ENST00000557916 RNF17Q9BXT8 1623 aaKnown RBP38.59■■■■□ 3.77
SMAD6-202ENST00000557916 CNTLNQ9NXG0 1405 aa38.58■■■■□ 3.77
SMAD6-202ENST00000557916 WASHC2CQ9Y4E1 1318 aa38.53■■■■□ 3.76
SMAD6-202ENST00000557916 PLPPR3Q6T4P5 718 aa38.53■■■■□ 3.76
SMAD6-202ENST00000557916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.51■■■■□ 3.76
SMAD6-202ENST00000557916 MROH1Q8NDA8 1641 aa38.51■■■■□ 3.75
SMAD6-202ENST00000557916 CLTCQ00610 1675 aaKnown RBP38.49■■■■□ 3.75
SMAD6-202ENST00000557916 NAIPQ13075 1403 aa38.49■■■■□ 3.75
SMAD6-202ENST00000557916 CEBPAP49715 358 aaPredicted RBP38.48■■■■□ 3.75
SMAD6-202ENST00000557916 KDM5DQ9BY66 1539 aa38.48■■■■□ 3.75
SMAD6-202ENST00000557916 FAM135AQ9P2D6 1515 aa38.48■■■■□ 3.75
SMAD6-202ENST00000557916 HFM1A2PYH4 1435 aa38.47■■■■□ 3.75
SMAD6-202ENST00000557916 DEPDC5O75140 1603 aa38.46■■■■□ 3.75
SMAD6-202ENST00000557916 ZMYM3Q14202 1370 aa38.46■■■■□ 3.75
SMAD6-202ENST00000557916 PRDM15P57071 1507 aaPredicted RBP38.46■■■■□ 3.75
SMAD6-202ENST00000557916 KANK1Q14678 1352 aa38.44■■■■□ 3.74
SMAD6-202ENST00000557916 MROH2AA6NES4 1674 aa38.43■■■■□ 3.74
SMAD6-202ENST00000557916 GCC2Q8IWJ2 1684 aa38.41■■■■□ 3.74
SMAD6-202ENST00000557916 ABCC3O15438 1527 aa38.41■■■■□ 3.74
SMAD6-202ENST00000557916 C3P01024 1663 aa38.39■■■■□ 3.74
SMAD6-202ENST00000557916 ZC3H13Q5T200 1668 aaKnown RBP38.37■■■■□ 3.73
SMAD6-202ENST00000557916 UNC13BO14795 1591 aa38.34■■■■□ 3.73
SMAD6-202ENST00000557916 CEP152O94986 1710 aa38.33■■■■□ 3.73
SMAD6-202ENST00000557916 VWDEQ8N2E2 1590 aa38.33■■■■□ 3.73
SMAD6-202ENST00000557916 NUP155O75694 1391 aa38.27■■■■□ 3.72
SMAD6-202ENST00000557916 LMTK2Q8IWU2 1503 aa38.27■■■■□ 3.72
SMAD6-202ENST00000557916 PZPP20742 1482 aa38.26■■■■□ 3.72
SMAD6-202ENST00000557916 CAMSAP1Q5T5Y3 1602 aa38.26■■■■□ 3.72
SMAD6-202ENST00000557916 NPATQ14207 1427 aa38.24■■■■□ 3.71
SMAD6-202ENST00000557916 SETD5Q9C0A6 1442 aa38.23■■■■□ 3.71
SMAD6-202ENST00000557916 FBXO31Q5XUX0 539 aaPredicted RBP38.23■■■■□ 3.71
SMAD6-202ENST00000557916 ARHGAP31Q2M1Z3 1444 aa38.2■■■■□ 3.71
SMAD6-202ENST00000557916 IQGAP3Q86VI3 1631 aa38.18■■■■□ 3.7
SMAD6-202ENST00000557916 TRIM52Q96A61 297 aa38.18■■■■□ 3.7
SMAD6-202ENST00000557916 TRIM26Q12899 539 aaPredicted RBP38.15■■■■□ 3.7
SMAD6-202ENST00000557916 SETD1BQ9UPS6 1966 aaKnown RBP38.15■■■■□ 3.7
SMAD6-202ENST00000557916 EFCAB6Q5THR3 1501 aa38.14■■■■□ 3.7
SMAD6-202ENST00000557916 TET3O43151 1660 aa38.13■■■■□ 3.69
SMAD6-202ENST00000557916 TNRQ92752 1358 aa38.11■■■■□ 3.69
SMAD6-202ENST00000557916 RAB3GAP2Q9H2M9 1393 aa38.11■■■■□ 3.69
SMAD6-202ENST00000557916 ERVK-7P63135 1459 aa38.1■■■■□ 3.69
SMAD6-202ENST00000557916 UHRF1BP1Q6BDS2 1440 aa38.1■■■■□ 3.69
SMAD6-202ENST00000557916 PREX1Q8TCU6 1659 aa38.09■■■■□ 3.69
SMAD6-202ENST00000557916 SPATA31D1Q6ZQQ2 1576 aa38.08■■■■□ 3.69
SMAD6-202ENST00000557916 LMTK3Q96Q04 1460 aa38.06■■■■□ 3.68
SMAD6-202ENST00000557916 CFAP65Q6ZU64 1925 aaKnown RBP38.06■■■■□ 3.68
SMAD6-202ENST00000557916 ACIN1Q9UKV3 1341 aaKnown RBP38.06■■■■□ 3.68
SMAD6-202ENST00000557916 RPRD2Q5VT52 1461 aaKnown RBP38.05■■■■□ 3.68
SMAD6-202ENST00000557916 MYO3AQ8NEV4 1616 aa38■■■■□ 3.67
SMAD6-202ENST00000557916 SLC4A1APQ9BWU0 796 aaKnown RBP38■■■■□ 3.67
SMAD6-202ENST00000557916 E9PCH4 1651 aa37.99■■■■□ 3.67
SMAD6-202ENST00000557916 HRCP23327 699 aa37.97■■■■□ 3.67
SMAD6-202ENST00000557916 NOS1P29475 1434 aa37.97■■■■□ 3.67
SMAD6-202ENST00000557916 HSPA2P54652 639 aa37.95■■■■□ 3.67
SMAD6-202ENST00000557916 NLRP1Q9C000 1473 aa37.94■■■■□ 3.66
SMAD6-202ENST00000557916 PKD2Q13563 968 aa37.93■■■■□ 3.66
SMAD6-202ENST00000557916 A2ML1A8K2U0 1454 aa37.92■■■■□ 3.66
SMAD6-202ENST00000557916 CEP170BQ9Y4F5 1589 aaPredicted RBP37.92■■■■□ 3.66
SMAD6-202ENST00000557916 MPHOSPH9Q99550 1183 aa37.91■■■■□ 3.66
SMAD6-202ENST00000557916 SYNMO15061 1565 aa37.89■■■■□ 3.66
SMAD6-202ENST00000557916 ZNF142P52746 1687 aaPredicted RBP37.89■■■■□ 3.66
SMAD6-202ENST00000557916 SLC52A1Q9NWF4 448 aa37.85■■■■□ 3.65
SMAD6-202ENST00000557916 IDI1Q13907 227 aa37.84■■■■□ 3.65
SMAD6-202ENST00000557916 PTPRTO14522 1441 aa37.81■■■■□ 3.64
SMAD6-202ENST00000557916 UGGT1Q9NYU2 1555 aa37.8■■■■□ 3.64
SMAD6-202ENST00000557916 FOXD1Q16676 465 aa37.79■■■■□ 3.64
SMAD6-202ENST00000557916 THEMISQ8N1K5 641 aaPredicted RBP37.78■■■■□ 3.64
SMAD6-202ENST00000557916 SPHKAPQ2M3C7 1700 aa37.76■■■■□ 3.64
SMAD6-202ENST00000557916 PIK3C2BO00750 1634 aa37.75■■■■□ 3.63
SMAD6-202ENST00000557916 STAG3Q9UJ98 1225 aa37.75■■■■□ 3.63
SMAD6-202ENST00000557916 PLA2R1Q13018 1463 aa37.71■■■■□ 3.63
SMAD6-202ENST00000557916 UBR1Q8IWV7 1749 aa37.7■■■■□ 3.63
SMAD6-202ENST00000557916 TRPM2O94759 1503 aa37.7■■■■□ 3.63
SMAD6-202ENST00000557916 PCGF6Q9BYE7 350 aa37.67■■■■□ 3.62
SMAD6-202ENST00000557916 ADGRB3O60242 1522 aa37.66■■■■□ 3.62
SMAD6-202ENST00000557916 CHGAP10645 457 aaKnown RBP37.65■■■■□ 3.62
SMAD6-202ENST00000557916 KDM5AP29375 1690 aaKnown RBP37.63■■■■□ 3.61
SMAD6-202ENST00000557916 NCKAP5LQ9HCH0 1330 aa37.61■■■■□ 3.61
SMAD6-202ENST00000557916 CLTCL1P53675 1640 aa37.6■■■■□ 3.61
SMAD6-202ENST00000557916 STRCQ7RTU9 1775 aa37.59■■■■□ 3.61
SMAD6-202ENST00000557916 ANKLE2Q86XL3 938 aa37.59■■■■□ 3.61
SMAD6-202ENST00000557916 TMEM131LA2VDJ0 1609 aa37.59■■■■□ 3.61
SMAD6-202ENST00000557916 TMEM2Q9UHN6 1383 aa37.57■■■■□ 3.6
SMAD6-202ENST00000557916 SLIT1O75093 1534 aa37.55■■■■□ 3.6
SMAD6-202ENST00000557916 CCDC144AA2RUR9 1427 aa37.55■■■■□ 3.6
SMAD6-202ENST00000557916 ARHGAP23Q9P227 1491 aa37.54■■■■□ 3.6
SMAD6-202ENST00000557916 DMRT2Q9Y5R5 561 aa37.53■■■■□ 3.6
SMAD6-202ENST00000557916 TXNDC2Q86VQ3 553 aa37.51■■■■□ 3.59
SMAD6-202ENST00000557916 EID1Q9Y6B2 187 aa37.51■■■■□ 3.59
SMAD6-202ENST00000557916 MYO5BQ9ULV0 1848 aa37.51■■■■□ 3.59
SMAD6-202ENST00000557916 ANKRD30BQ9BXX2 1392 aa37.5■■■■□ 3.59
SMAD6-202ENST00000557916 LTKP29376 864 aa37.49■■■■□ 3.59
SMAD6-202ENST00000557916 SCAF11Q99590 1463 aaKnown RBP37.46■■■■□ 3.59
SMAD6-202ENST00000557916 POLR1AO95602 1720 aaPredicted RBP37.46■■■■□ 3.59
SMAD6-202ENST00000557916 KIF1BO60333 1816 aa37.46■■■■□ 3.59
SMAD6-202ENST00000557916 ZNF326Q5BKZ1 582 aaKnown RBP37.45■■■■□ 3.59
SMAD6-202ENST00000557916 RIMS2Q9UQ26 1411 aa37.44■■■■□ 3.58
SMAD6-202ENST00000557916 HDGFP51858 240 aaKnown RBP37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms