RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
TGFB3-207ENST00000557493 ABCC5O15440 1437 aa15.85■□□□□ 0.13
TGFB3-207ENST00000557493 PTPRKQ15262 1439 aa15.85■□□□□ 0.13
TGFB3-207ENST00000557493 ABCC1P33527 1531 aa15.84■□□□□ 0.13
TGFB3-207ENST00000557493 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
TGFB3-207ENST00000557493 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
TGFB3-207ENST00000557493 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
TGFB3-207ENST00000557493 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
TGFB3-207ENST00000557493 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
TGFB3-207ENST00000557493 HSPA1LP34931 641 aa15.83■□□□□ 0.12
TGFB3-207ENST00000557493 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
TGFB3-207ENST00000557493 ROCK1Q13464 1354 aa15.83■□□□□ 0.12
TGFB3-207ENST00000557493 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
TGFB3-207ENST00000557493 PLA2R1Q13018 1463 aa15.83■□□□□ 0.12
TGFB3-207ENST00000557493 ADGRL2O95490 1459 aa15.81■□□□□ 0.12
TGFB3-207ENST00000557493 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
TGFB3-207ENST00000557493 MAST1Q9Y2H9 1570 aa15.8■□□□□ 0.12
TGFB3-207ENST00000557493 MBD5Q9P267 1494 aa15.8■□□□□ 0.12
TGFB3-207ENST00000557493 RSPH4AQ5TD94 716 aa15.8■□□□□ 0.12
TGFB3-207ENST00000557493 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
TGFB3-207ENST00000557493 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
TGFB3-207ENST00000557493 TOM1O60784 492 aa15.79■□□□□ 0.12
TGFB3-207ENST00000557493 PIP4K2BP78356 416 aa15.79■□□□□ 0.12
TGFB3-207ENST00000557493 NAIPQ13075 1403 aa15.78■□□□□ 0.12
TGFB3-207ENST00000557493 MROH2AA6NES4 1674 aa15.77■□□□□ 0.12
TGFB3-207ENST00000557493 HRCP23327 699 aa15.76■□□□□ 0.11
TGFB3-207ENST00000557493 ANKRD30AQ9BXX3 1397 aa15.75■□□□□ 0.11
TGFB3-207ENST00000557493 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
TGFB3-207ENST00000557493 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
TGFB3-207ENST00000557493 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
TGFB3-207ENST00000557493 MYO3AQ8NEV4 1616 aa15.74■□□□□ 0.11
TGFB3-207ENST00000557493 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
TGFB3-207ENST00000557493 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
TGFB3-207ENST00000557493 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
TGFB3-207ENST00000557493 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
TGFB3-207ENST00000557493 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
TGFB3-207ENST00000557493 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
TGFB3-207ENST00000557493 CHIC2Q9UKJ5 165 aa15.73■□□□□ 0.11
TGFB3-207ENST00000557493 CPS1P31327 1500 aa15.72■□□□□ 0.11
TGFB3-207ENST00000557493 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
TGFB3-207ENST00000557493 RRP7BPQ9NSQ0 103 aa15.7■□□□□ 0.1
TGFB3-207ENST00000557493 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
TGFB3-207ENST00000557493 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
TGFB3-207ENST00000557493 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
TGFB3-207ENST00000557493 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
TGFB3-207ENST00000557493 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
TGFB3-207ENST00000557493 KIF15Q9NS87 1388 aa15.67■□□□□ 0.1
TGFB3-207ENST00000557493 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
TGFB3-207ENST00000557493 GGT6Q6P531 493 aa15.66■□□□□ 0.1
TGFB3-207ENST00000557493 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
TGFB3-207ENST00000557493 ATP7AQ04656 1500 aa15.65■□□□□ 0.1
TGFB3-207ENST00000557493 DUOX2Q9NRD8 1548 aa15.64■□□□□ 0.09
TGFB3-207ENST00000557493 ANKRD50Q9ULJ7 1429 aa15.64■□□□□ 0.09
TGFB3-207ENST00000557493 A2MP01023 1474 aa15.64■□□□□ 0.09
TGFB3-207ENST00000557493 ERBINQ96RT1 1412 aa15.61■□□□□ 0.09
TGFB3-207ENST00000557493 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
TGFB3-207ENST00000557493 NEURL4Q96JN8 1562 aa15.6■□□□□ 0.09
TGFB3-207ENST00000557493 KDM5DQ9BY66 1539 aa15.59■□□□□ 0.09
TGFB3-207ENST00000557493 TNRQ92752 1358 aa15.59■□□□□ 0.09
TGFB3-207ENST00000557493 UNC13BO14795 1591 aa15.58■□□□□ 0.09
TGFB3-207ENST00000557493 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
TGFB3-207ENST00000557493 VWDEQ8N2E2 1590 aa15.57■□□□□ 0.08
TGFB3-207ENST00000557493 ALKQ9UM73 1620 aa15.57■□□□□ 0.08
TGFB3-207ENST00000557493 POLR1AO95602 1720 aaPredicted RBP15.56■□□□□ 0.08
TGFB3-207ENST00000557493 NPHP4O75161 1426 aaPredicted RBP15.55■□□□□ 0.08
TGFB3-207ENST00000557493 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
TGFB3-207ENST00000557493 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
TGFB3-207ENST00000557493 RGS17Q9UGC6 210 aaPredicted RBP15.54■□□□□ 0.08
TGFB3-207ENST00000557493 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
TGFB3-207ENST00000557493 MED14O60244 1454 aa15.52■□□□□ 0.08
TGFB3-207ENST00000557493 PZPP20742 1482 aa15.52■□□□□ 0.08
TGFB3-207ENST00000557493 DEPDC5O75140 1603 aa15.51■□□□□ 0.07
TGFB3-207ENST00000557493 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
TGFB3-207ENST00000557493 LRRC7Q96NW7 1537 aa15.5■□□□□ 0.07
TGFB3-207ENST00000557493 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
TGFB3-207ENST00000557493 NLRP1Q9C000 1473 aa15.5■□□□□ 0.07
TGFB3-207ENST00000557493 RNF17Q9BXT8 1623 aaKnown RBP15.5■□□□□ 0.07
TGFB3-207ENST00000557493 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
TGFB3-207ENST00000557493 NUP155O75694 1391 aa15.49■□□□□ 0.07
TGFB3-207ENST00000557493 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
TGFB3-207ENST00000557493 UGGT1Q9NYU2 1555 aa15.48■□□□□ 0.07
TGFB3-207ENST00000557493 PRDM15P57071 1507 aaPredicted RBP15.47■□□□□ 0.07
TGFB3-207ENST00000557493 WASHC2CQ9Y4E1 1318 aa15.46■□□□□ 0.07
TGFB3-207ENST00000557493 SYNMO15061 1565 aa15.46■□□□□ 0.07
TGFB3-207ENST00000557493 KIF3BO15066 747 aa15.46■□□□□ 0.07
TGFB3-207ENST00000557493 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
TGFB3-207ENST00000557493 POTEAQ6S8J7 498 aa15.45■□□□□ 0.06
TGFB3-207ENST00000557493 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
TGFB3-207ENST00000557493 MROH1Q8NDA8 1641 aa15.43■□□□□ 0.06
TGFB3-207ENST00000557493 KANK1Q14678 1352 aa15.42■□□□□ 0.06
TGFB3-207ENST00000557493 TET3O43151 1660 aa15.41■□□□□ 0.06
TGFB3-207ENST00000557493 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
TGFB3-207ENST00000557493 STRCP1A6NGW2 1772 aa15.39■□□□□ 0.05
TGFB3-207ENST00000557493 ANKRD30BQ9BXX2 1392 aa15.38■□□□□ 0.05
TGFB3-207ENST00000557493 FAM135BQ49AJ0 1406 aa15.38■□□□□ 0.05
TGFB3-207ENST00000557493 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
TGFB3-207ENST00000557493 LMTK2Q8IWU2 1503 aa15.38■□□□□ 0.05
TGFB3-207ENST00000557493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
TGFB3-207ENST00000557493 RPRD2Q5VT52 1461 aaKnown RBP15.36■□□□□ 0.05
TGFB3-207ENST00000557493 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms