RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 ZMYM3Q14202 1370 aa22.05■■□□□ 1.12
ITGA7-219ENST00000557488 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
ITGA7-219ENST00000557488 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
ITGA7-219ENST00000557488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
ITGA7-219ENST00000557488 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
ITGA7-219ENST00000557488 EIF2AK4Q9P2K8 1649 aaKnown RBP22.01■■□□□ 1.11
ITGA7-219ENST00000557488 FBXO31Q5XUX0 539 aaPredicted RBP22■■□□□ 1.11
ITGA7-219ENST00000557488 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
ITGA7-219ENST00000557488 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
ITGA7-219ENST00000557488 ERBINQ96RT1 1412 aa21.99■■□□□ 1.11
ITGA7-219ENST00000557488 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
ITGA7-219ENST00000557488 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
ITGA7-219ENST00000557488 MROH2AA6NES4 1674 aa21.98■■□□□ 1.11
ITGA7-219ENST00000557488 CNTLNQ9NXG0 1405 aa21.97■■□□□ 1.11
ITGA7-219ENST00000557488 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
ITGA7-219ENST00000557488 CEP152O94986 1710 aa21.97■■□□□ 1.11
ITGA7-219ENST00000557488 SETD1BQ9UPS6 1966 aaKnown RBP21.95■■□□□ 1.1
ITGA7-219ENST00000557488 HSPA2P54652 639 aa21.94■■□□□ 1.1
ITGA7-219ENST00000557488 ABCC3O15438 1527 aa21.94■■□□□ 1.1
ITGA7-219ENST00000557488 DEPDC5O75140 1603 aa21.94■■□□□ 1.1
ITGA7-219ENST00000557488 KDM5DQ9BY66 1539 aa21.93■■□□□ 1.1
ITGA7-219ENST00000557488 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
ITGA7-219ENST00000557488 NAIPQ13075 1403 aa21.9■■□□□ 1.1
ITGA7-219ENST00000557488 PRDM15P57071 1507 aaPredicted RBP21.9■■□□□ 1.1
ITGA7-219ENST00000557488 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
ITGA7-219ENST00000557488 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
ITGA7-219ENST00000557488 PZPP20742 1482 aa21.84■■□□□ 1.09
ITGA7-219ENST00000557488 PREX1Q8TCU6 1659 aa21.84■■□□□ 1.09
ITGA7-219ENST00000557488 NPATQ14207 1427 aa21.83■■□□□ 1.09
ITGA7-219ENST00000557488 ZC3H13Q5T200 1668 aaKnown RBP21.83■■□□□ 1.09
ITGA7-219ENST00000557488 FAM135AQ9P2D6 1515 aa21.83■■□□□ 1.09
ITGA7-219ENST00000557488 UNC13BO14795 1591 aa21.82■■□□□ 1.08
ITGA7-219ENST00000557488 KANK1Q14678 1352 aa21.82■■□□□ 1.08
ITGA7-219ENST00000557488 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
ITGA7-219ENST00000557488 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
ITGA7-219ENST00000557488 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
ITGA7-219ENST00000557488 NUP155O75694 1391 aa21.79■■□□□ 1.08
ITGA7-219ENST00000557488 TNRQ92752 1358 aa21.79■■□□□ 1.08
ITGA7-219ENST00000557488 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
ITGA7-219ENST00000557488 ERVK-7P63135 1459 aa21.77■■□□□ 1.08
ITGA7-219ENST00000557488 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.08
ITGA7-219ENST00000557488 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.07
ITGA7-219ENST00000557488 SPATA31D1Q6ZQQ2 1576 aa21.76■■□□□ 1.07
ITGA7-219ENST00000557488 IQGAP3Q86VI3 1631 aa21.74■■□□□ 1.07
ITGA7-219ENST00000557488 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
ITGA7-219ENST00000557488 E9PCH4 1651 aa21.72■■□□□ 1.07
ITGA7-219ENST00000557488 TET3O43151 1660 aa21.72■■□□□ 1.07
ITGA7-219ENST00000557488 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
ITGA7-219ENST00000557488 EFCAB6Q5THR3 1501 aa21.72■■□□□ 1.07
ITGA7-219ENST00000557488 CEP170BQ9Y4F5 1589 aaPredicted RBP21.7■■□□□ 1.06
ITGA7-219ENST00000557488 IDI1Q13907 227 aa21.7■■□□□ 1.06
ITGA7-219ENST00000557488 SYNMO15061 1565 aa21.7■■□□□ 1.06
ITGA7-219ENST00000557488 NOS1P29475 1434 aa21.69■■□□□ 1.06
ITGA7-219ENST00000557488 A2ML1A8K2U0 1454 aa21.69■■□□□ 1.06
ITGA7-219ENST00000557488 ZNF142P52746 1687 aaPredicted RBP21.69■■□□□ 1.06
ITGA7-219ENST00000557488 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
ITGA7-219ENST00000557488 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
ITGA7-219ENST00000557488 FOXD1Q16676 465 aa21.65■■□□□ 1.06
ITGA7-219ENST00000557488 RAB3GAP2Q9H2M9 1393 aa21.64■■□□□ 1.06
ITGA7-219ENST00000557488 UGGT1Q9NYU2 1555 aa21.63■■□□□ 1.05
ITGA7-219ENST00000557488 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
ITGA7-219ENST00000557488 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
ITGA7-219ENST00000557488 PKD2Q13563 968 aa21.62■■□□□ 1.05
ITGA7-219ENST00000557488 UBR1Q8IWV7 1749 aa21.61■■□□□ 1.05
ITGA7-219ENST00000557488 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
ITGA7-219ENST00000557488 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
ITGA7-219ENST00000557488 SLC4A1APQ9BWU0 796 aaKnown RBP21.6■■□□□ 1.05
ITGA7-219ENST00000557488 MYO5BQ9ULV0 1848 aa21.59■■□□□ 1.05
ITGA7-219ENST00000557488 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.05
ITGA7-219ENST00000557488 PLA2R1Q13018 1463 aa21.58■■□□□ 1.04
ITGA7-219ENST00000557488 LTKP29376 864 aa21.56■■□□□ 1.04
ITGA7-219ENST00000557488 PTPRTO14522 1441 aa21.55■■□□□ 1.04
ITGA7-219ENST00000557488 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
ITGA7-219ENST00000557488 SPHKAPQ2M3C7 1700 aa21.54■■□□□ 1.04
ITGA7-219ENST00000557488 CHGAP10645 457 aaKnown RBP21.52■■□□□ 1.04
ITGA7-219ENST00000557488 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
ITGA7-219ENST00000557488 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
ITGA7-219ENST00000557488 ANKLE2Q86XL3 938 aa21.5■■□□□ 1.03
ITGA7-219ENST00000557488 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
ITGA7-219ENST00000557488 TMEM131LA2VDJ0 1609 aa21.5■■□□□ 1.03
ITGA7-219ENST00000557488 TRIM26Q12899 539 aaPredicted RBP21.49■■□□□ 1.03
ITGA7-219ENST00000557488 TXNDC2Q86VQ3 553 aa21.49■■□□□ 1.03
ITGA7-219ENST00000557488 ARHGAP23Q9P227 1491 aa21.49■■□□□ 1.03
ITGA7-219ENST00000557488 CLTCL1P53675 1640 aa21.48■■□□□ 1.03
ITGA7-219ENST00000557488 NUTM2DQ5VT03 806 aaPredicted RBP21.48■■□□□ 1.03
ITGA7-219ENST00000557488 POLR1AO95602 1720 aaPredicted RBP21.47■■□□□ 1.03
ITGA7-219ENST00000557488 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
ITGA7-219ENST00000557488 HRCP23327 699 aa21.47■■□□□ 1.03
ITGA7-219ENST00000557488 TMEM2Q9UHN6 1383 aa21.47■■□□□ 1.03
ITGA7-219ENST00000557488 SLIT1O75093 1534 aa21.46■■□□□ 1.03
ITGA7-219ENST00000557488 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
ITGA7-219ENST00000557488 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
ITGA7-219ENST00000557488 TRPM2O94759 1503 aa21.43■■□□□ 1.02
ITGA7-219ENST00000557488 NPHP4O75161 1426 aaPredicted RBP21.42■■□□□ 1.02
ITGA7-219ENST00000557488 MED14O60244 1454 aa21.41■■□□□ 1.02
ITGA7-219ENST00000557488 ZNF335Q9H4Z2 1342 aaPredicted RBP21.41■■□□□ 1.02
ITGA7-219ENST00000557488 SCAF11Q99590 1463 aaKnown RBP21.4■■□□□ 1.02
ITGA7-219ENST00000557488 ZFYVE9O95405 1425 aa21.4■■□□□ 1.02
ITGA7-219ENST00000557488 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
ITGA7-219ENST00000557488 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms