RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
HNRNPC-232ENST00000557442 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
HNRNPC-232ENST00000557442 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
HNRNPC-232ENST00000557442 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
HNRNPC-232ENST00000557442 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
HNRNPC-232ENST00000557442 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
HNRNPC-232ENST00000557442 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
HNRNPC-232ENST00000557442 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
HNRNPC-232ENST00000557442 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 KIF3BO15066 747 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 RRP7BPQ9NSQ0 103 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
HNRNPC-232ENST00000557442 PRDM15P57071 1507 aaPredicted RBP16.16■□□□□ 0.18
HNRNPC-232ENST00000557442 CFAP65Q6ZU64 1925 aaKnown RBP16.16■□□□□ 0.18
HNRNPC-232ENST00000557442 ITGAEP38570 1179 aa16.16■□□□□ 0.18
HNRNPC-232ENST00000557442 GGT6Q6P531 493 aa16.16■□□□□ 0.18
HNRNPC-232ENST00000557442 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
HNRNPC-232ENST00000557442 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
HNRNPC-232ENST00000557442 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
HNRNPC-232ENST00000557442 ROCK1Q13464 1354 aa16.12■□□□□ 0.17
HNRNPC-232ENST00000557442 ABCC3O15438 1527 aa16.11■□□□□ 0.17
HNRNPC-232ENST00000557442 UNC13BO14795 1591 aa16.11■□□□□ 0.17
HNRNPC-232ENST00000557442 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
HNRNPC-232ENST00000557442 MYO3AQ8NEV4 1616 aa16.09■□□□□ 0.17
HNRNPC-232ENST00000557442 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-232ENST00000557442 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
HNRNPC-232ENST00000557442 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
HNRNPC-232ENST00000557442 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
HNRNPC-232ENST00000557442 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
HNRNPC-232ENST00000557442 WASHC2CQ9Y4E1 1318 aa16.06■□□□□ 0.16
HNRNPC-232ENST00000557442 TET3O43151 1660 aa16.05■□□□□ 0.16
HNRNPC-232ENST00000557442 PZPP20742 1482 aa16.05■□□□□ 0.16
HNRNPC-232ENST00000557442 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
HNRNPC-232ENST00000557442 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
HNRNPC-232ENST00000557442 NPATQ14207 1427 aa16.04■□□□□ 0.16
HNRNPC-232ENST00000557442 KANK1Q14678 1352 aa16.03■□□□□ 0.16
HNRNPC-232ENST00000557442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.162e-26■■□□□ 11.8
HNRNPC-232ENST00000557442 EFCAB6Q5THR3 1501 aa16.02■□□□□ 0.15
HNRNPC-232ENST00000557442 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
HNRNPC-232ENST00000557442 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
HNRNPC-232ENST00000557442 NAIPQ13075 1403 aa16.01■□□□□ 0.15
HNRNPC-232ENST00000557442 UHRF1BP1Q6BDS2 1440 aa16.01■□□□□ 0.15
HNRNPC-232ENST00000557442 E9PCH4 1651 aa16■□□□□ 0.15
HNRNPC-232ENST00000557442 SPATA31D1Q6ZQQ2 1576 aa15.99■□□□□ 0.15
HNRNPC-232ENST00000557442 CEP170BQ9Y4F5 1589 aaPredicted RBP15.99■□□□□ 0.15
HNRNPC-232ENST00000557442 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
HNRNPC-232ENST00000557442 ARHGAP31Q2M1Z3 1444 aa15.95■□□□□ 0.14
HNRNPC-232ENST00000557442 TNRQ92752 1358 aa15.95■□□□□ 0.14
HNRNPC-232ENST00000557442 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
HNRNPC-232ENST00000557442 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
HNRNPC-232ENST00000557442 STRCQ7RTU9 1775 aa15.93■□□□□ 0.14
HNRNPC-232ENST00000557442 POLR1AO95602 1720 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-232ENST00000557442 MYO5BQ9ULV0 1848 aa15.93■□□□□ 0.14
HNRNPC-232ENST00000557442 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
HNRNPC-232ENST00000557442 SYNMO15061 1565 aa15.92■□□□□ 0.14
HNRNPC-232ENST00000557442 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
HNRNPC-232ENST00000557442 NUP155O75694 1391 aa15.92■□□□□ 0.14
HNRNPC-232ENST00000557442 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
HNRNPC-232ENST00000557442 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
HNRNPC-232ENST00000557442 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
HNRNPC-232ENST00000557442 HSPA2P54652 639 aa15.91■□□□□ 0.14
HNRNPC-232ENST00000557442 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.14
HNRNPC-232ENST00000557442 UGGT1Q9NYU2 1555 aa15.88■□□□□ 0.13
HNRNPC-232ENST00000557442 NOS1P29475 1434 aa15.86■□□□□ 0.13
HNRNPC-232ENST00000557442 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
HNRNPC-232ENST00000557442 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
HNRNPC-232ENST00000557442 KIF1BO60333 1816 aa15.84■□□□□ 0.13
HNRNPC-232ENST00000557442 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
HNRNPC-232ENST00000557442 ADGRB3O60242 1522 aa15.83■□□□□ 0.13
HNRNPC-232ENST00000557442 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
HNRNPC-232ENST00000557442 TMEM131LA2VDJ0 1609 aa15.8■□□□□ 0.12
HNRNPC-232ENST00000557442 TRPM2O94759 1503 aa15.8■□□□□ 0.12
HNRNPC-232ENST00000557442 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
HNRNPC-232ENST00000557442 NEURL4Q96JN8 1562 aa15.79■□□□□ 0.12
HNRNPC-232ENST00000557442 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
HNRNPC-232ENST00000557442 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
HNRNPC-232ENST00000557442 SLIT1O75093 1534 aa15.76■□□□□ 0.11
HNRNPC-232ENST00000557442 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-232ENST00000557442 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-232ENST00000557442 PTPRTO14522 1441 aa15.75■□□□□ 0.11
HNRNPC-232ENST00000557442 PKD2Q13563 968 aa15.74■□□□□ 0.11
HNRNPC-232ENST00000557442 IDI1Q13907 227 aa15.74■□□□□ 0.11
HNRNPC-232ENST00000557442 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
HNRNPC-232ENST00000557442 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
HNRNPC-232ENST00000557442 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
HNRNPC-232ENST00000557442 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
HNRNPC-232ENST00000557442 SCAF11Q99590 1463 aaKnown RBP15.72■□□□□ 0.11
HNRNPC-232ENST00000557442 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
HNRNPC-232ENST00000557442 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
HNRNPC-232ENST00000557442 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
HNRNPC-232ENST00000557442 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
HNRNPC-232ENST00000557442 MED14O60244 1454 aa15.69■□□□□ 0.1
HNRNPC-232ENST00000557442 CHGAP10645 457 aaKnown RBP15.68■□□□□ 0.1
HNRNPC-232ENST00000557442 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
HNRNPC-232ENST00000557442 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
HNRNPC-232ENST00000557442 PPLO60437 1756 aa15.68■□□□□ 0.1
HNRNPC-232ENST00000557442 NPHP4O75161 1426 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms