RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PREX1Q8TCU6 1659 aa19.14■□□□□ 0.65
SLIRP-209ENST00000557342 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SLIRP-209ENST00000557342 ERBINQ96RT1 1412 aa19.12■□□□□ 0.65
SLIRP-209ENST00000557342 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
SLIRP-209ENST00000557342 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
SLIRP-209ENST00000557342 CHIC2Q9UKJ5 165 aa19.12■□□□□ 0.65
SLIRP-209ENST00000557342 ZMYM3Q14202 1370 aa19.11■□□□□ 0.65
SLIRP-209ENST00000557342 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
SLIRP-209ENST00000557342 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
SLIRP-209ENST00000557342 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
SLIRP-209ENST00000557342 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
SLIRP-209ENST00000557342 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
SLIRP-209ENST00000557342 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
SLIRP-209ENST00000557342 NPATQ14207 1427 aa19.07■□□□□ 0.64
SLIRP-209ENST00000557342 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
SLIRP-209ENST00000557342 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
SLIRP-209ENST00000557342 CEP152O94986 1710 aa19.04■□□□□ 0.64
SLIRP-209ENST00000557342 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
SLIRP-209ENST00000557342 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
SLIRP-209ENST00000557342 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
SLIRP-209ENST00000557342 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
SLIRP-209ENST00000557342 ABCC3O15438 1527 aa19.02■□□□□ 0.64
SLIRP-209ENST00000557342 ITGAEP38570 1179 aa19.01■□□□□ 0.63
SLIRP-209ENST00000557342 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
SLIRP-209ENST00000557342 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
SLIRP-209ENST00000557342 PZPP20742 1482 aa19■□□□□ 0.63
SLIRP-209ENST00000557342 KANK1Q14678 1352 aa18.99■□□□□ 0.63
SLIRP-209ENST00000557342 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
SLIRP-209ENST00000557342 MYO3AQ8NEV4 1616 aa18.98■□□□□ 0.63
SLIRP-209ENST00000557342 ZNF142P52746 1687 aaPredicted RBP18.97■□□□□ 0.63
SLIRP-209ENST00000557342 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
SLIRP-209ENST00000557342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.634e-8■■■■□ 19.3
SLIRP-209ENST00000557342 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
SLIRP-209ENST00000557342 HSPA2P54652 639 aa18.94■□□□□ 0.62
SLIRP-209ENST00000557342 UNC13BO14795 1591 aa18.93■□□□□ 0.62
SLIRP-209ENST00000557342 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
SLIRP-209ENST00000557342 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
SLIRP-209ENST00000557342 TNRQ92752 1358 aa18.92■□□□□ 0.62
SLIRP-209ENST00000557342 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
SLIRP-209ENST00000557342 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
SLIRP-209ENST00000557342 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
SLIRP-209ENST00000557342 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-209ENST00000557342 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
SLIRP-209ENST00000557342 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
SLIRP-209ENST00000557342 NLRP1Q9C000 1473 aa18.88■□□□□ 0.61
SLIRP-209ENST00000557342 TET3O43151 1660 aa18.88■□□□□ 0.61
SLIRP-209ENST00000557342 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
SLIRP-209ENST00000557342 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
SLIRP-209ENST00000557342 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
SLIRP-209ENST00000557342 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
SLIRP-209ENST00000557342 NAIPQ13075 1403 aa18.83■□□□□ 0.61
SLIRP-209ENST00000557342 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
SLIRP-209ENST00000557342 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
SLIRP-209ENST00000557342 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
SLIRP-209ENST00000557342 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
SLIRP-209ENST00000557342 NUP155O75694 1391 aa18.81■□□□□ 0.6
SLIRP-209ENST00000557342 E9PCH4 1651 aa18.79■□□□□ 0.6
SLIRP-209ENST00000557342 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
SLIRP-209ENST00000557342 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
SLIRP-209ENST00000557342 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
SLIRP-209ENST00000557342 NOS1P29475 1434 aa18.77■□□□□ 0.6
SLIRP-209ENST00000557342 KDM5AP29375 1690 aaKnown RBP18.77■□□□□ 0.6
SLIRP-209ENST00000557342 PKD2Q13563 968 aa18.77■□□□□ 0.6
SLIRP-209ENST00000557342 PTPRTO14522 1441 aa18.76■□□□□ 0.59
SLIRP-209ENST00000557342 SYNMO15061 1565 aa18.76■□□□□ 0.59
SLIRP-209ENST00000557342 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
SLIRP-209ENST00000557342 NCKAP5LQ9HCH0 1330 aa18.73■□□□□ 0.59
SLIRP-209ENST00000557342 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
SLIRP-209ENST00000557342 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SLIRP-209ENST00000557342 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
SLIRP-209ENST00000557342 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
SLIRP-209ENST00000557342 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
SLIRP-209ENST00000557342 ACIN1Q9UKV3 1341 aaKnown RBP18.7■□□□□ 0.58
SLIRP-209ENST00000557342 IDI1Q13907 227 aa18.69■□□□□ 0.58
SLIRP-209ENST00000557342 ADGRB3O60242 1522 aa18.68■□□□□ 0.58
SLIRP-209ENST00000557342 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
SLIRP-209ENST00000557342 SLIT1O75093 1534 aa18.67■□□□□ 0.58
SLIRP-209ENST00000557342 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
SLIRP-209ENST00000557342 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
SLIRP-209ENST00000557342 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
SLIRP-209ENST00000557342 MED14O60244 1454 aa18.65■□□□□ 0.58
SLIRP-209ENST00000557342 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
SLIRP-209ENST00000557342 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
SLIRP-209ENST00000557342 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
SLIRP-209ENST00000557342 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
SLIRP-209ENST00000557342 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
SLIRP-209ENST00000557342 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
SLIRP-209ENST00000557342 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
SLIRP-209ENST00000557342 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
SLIRP-209ENST00000557342 TRPM2O94759 1503 aa18.59■□□□□ 0.57
SLIRP-209ENST00000557342 KIF1BO60333 1816 aa18.59■□□□□ 0.57
SLIRP-209ENST00000557342 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
SLIRP-209ENST00000557342 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
SLIRP-209ENST00000557342 LTKP29376 864 aa18.57■□□□□ 0.56
SLIRP-209ENST00000557342 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
SLIRP-209ENST00000557342 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
SLIRP-209ENST00000557342 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
SLIRP-209ENST00000557342 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
SLIRP-209ENST00000557342 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
SLIRP-209ENST00000557342 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms