RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
HNRNPC-230ENST00000557201 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
HNRNPC-230ENST00000557201 KIF3BO15066 747 aa17.13■□□□□ 0.33
HNRNPC-230ENST00000557201 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-230ENST00000557201 PZPP20742 1482 aa17.12■□□□□ 0.33
HNRNPC-230ENST00000557201 KDM5DQ9BY66 1539 aa17.12■□□□□ 0.33
HNRNPC-230ENST00000557201 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
HNRNPC-230ENST00000557201 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
HNRNPC-230ENST00000557201 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
HNRNPC-230ENST00000557201 TNRQ92752 1358 aa17.09■□□□□ 0.33
HNRNPC-230ENST00000557201 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
HNRNPC-230ENST00000557201 WASHC2CQ9Y4E1 1318 aa17.07■□□□□ 0.32
HNRNPC-230ENST00000557201 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
HNRNPC-230ENST00000557201 NEURL4Q96JN8 1562 aa17.06■□□□□ 0.32
HNRNPC-230ENST00000557201 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
HNRNPC-230ENST00000557201 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
HNRNPC-230ENST00000557201 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
HNRNPC-230ENST00000557201 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
HNRNPC-230ENST00000557201 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
HNRNPC-230ENST00000557201 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
HNRNPC-230ENST00000557201 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
HNRNPC-230ENST00000557201 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
HNRNPC-230ENST00000557201 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
HNRNPC-230ENST00000557201 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
HNRNPC-230ENST00000557201 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.31
HNRNPC-230ENST00000557201 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
HNRNPC-230ENST00000557201 ABCC3O15438 1527 aa17.01■□□□□ 0.31
HNRNPC-230ENST00000557201 MYOM3Q5VTT5 1437 aa17■□□□□ 0.31
HNRNPC-230ENST00000557201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.312e-10■□□□□ 8.9
HNRNPC-230ENST00000557201 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
HNRNPC-230ENST00000557201 MED14O60244 1454 aa16.99■□□□□ 0.31
HNRNPC-230ENST00000557201 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
HNRNPC-230ENST00000557201 ADRA2BP18089 450 aa16.99■□□□□ 0.31
HNRNPC-230ENST00000557201 THEMISQ8N1K5 641 aaPredicted RBP16.99■□□□□ 0.31
HNRNPC-230ENST00000557201 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
HNRNPC-230ENST00000557201 SHANK2Q9UPX8 1470 aa16.98■□□□□ 0.31
HNRNPC-230ENST00000557201 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
HNRNPC-230ENST00000557201 CPS1P31327 1500 aa16.98■□□□□ 0.31
HNRNPC-230ENST00000557201 ZC3H13Q5T200 1668 aaKnown RBP16.98■□□□□ 0.31
HNRNPC-230ENST00000557201 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
HNRNPC-230ENST00000557201 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
HNRNPC-230ENST00000557201 SOCS7O14512 581 aa16.96■□□□□ 0.31
HNRNPC-230ENST00000557201 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
HNRNPC-230ENST00000557201 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
HNRNPC-230ENST00000557201 DUOX2Q9NRD8 1548 aa16.94■□□□□ 0.3
HNRNPC-230ENST00000557201 ABCC5O15440 1437 aa16.92■□□□□ 0.3
HNRNPC-230ENST00000557201 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
HNRNPC-230ENST00000557201 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
HNRNPC-230ENST00000557201 CEP152O94986 1710 aa16.89■□□□□ 0.3
HNRNPC-230ENST00000557201 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-230ENST00000557201 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
HNRNPC-230ENST00000557201 KIF15Q9NS87 1388 aa16.89■□□□□ 0.29
HNRNPC-230ENST00000557201 TOM1O60784 492 aa16.89■□□□□ 0.29
HNRNPC-230ENST00000557201 ERBINQ96RT1 1412 aa16.88■□□□□ 0.29
HNRNPC-230ENST00000557201 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
HNRNPC-230ENST00000557201 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
HNRNPC-230ENST00000557201 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
HNRNPC-230ENST00000557201 HSPA1LP34931 641 aa16.87■□□□□ 0.29
HNRNPC-230ENST00000557201 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
HNRNPC-230ENST00000557201 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
HNRNPC-230ENST00000557201 DAPK1P53355 1430 aa16.86■□□□□ 0.29
HNRNPC-230ENST00000557201 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
HNRNPC-230ENST00000557201 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
HNRNPC-230ENST00000557201 SLIT1O75093 1534 aa16.85■□□□□ 0.29
HNRNPC-230ENST00000557201 LRRC7Q96NW7 1537 aa16.85■□□□□ 0.29
HNRNPC-230ENST00000557201 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
HNRNPC-230ENST00000557201 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.29
HNRNPC-230ENST00000557201 LTKP29376 864 aa16.83■□□□□ 0.28
HNRNPC-230ENST00000557201 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
HNRNPC-230ENST00000557201 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
HNRNPC-230ENST00000557201 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
HNRNPC-230ENST00000557201 SYNMO15061 1565 aa16.81■□□□□ 0.28
HNRNPC-230ENST00000557201 MED1Q15648 1581 aaPredicted RBP16.8■□□□□ 0.28
HNRNPC-230ENST00000557201 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
HNRNPC-230ENST00000557201 APLP2Q06481 763 aa16.78■□□□□ 0.28
HNRNPC-230ENST00000557201 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
HNRNPC-230ENST00000557201 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
HNRNPC-230ENST00000557201 TMEM2Q9UHN6 1383 aa16.78■□□□□ 0.28
HNRNPC-230ENST00000557201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.282e-26■■□□□ 11.8
HNRNPC-230ENST00000557201 KANK1Q14678 1352 aa16.76■□□□□ 0.27
HNRNPC-230ENST00000557201 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
HNRNPC-230ENST00000557201 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
HNRNPC-230ENST00000557201 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
HNRNPC-230ENST00000557201 NOS1P29475 1434 aa16.75■□□□□ 0.27
HNRNPC-230ENST00000557201 IDI1Q13907 227 aa16.75■□□□□ 0.27
HNRNPC-230ENST00000557201 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
HNRNPC-230ENST00000557201 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
HNRNPC-230ENST00000557201 EFCAB6Q5THR3 1501 aa16.72■□□□□ 0.27
HNRNPC-230ENST00000557201 TET3O43151 1660 aa16.71■□□□□ 0.27
HNRNPC-230ENST00000557201 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
HNRNPC-230ENST00000557201 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
HNRNPC-230ENST00000557201 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
HNRNPC-230ENST00000557201 ANKRD50Q9ULJ7 1429 aa16.67■□□□□ 0.26
HNRNPC-230ENST00000557201 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
HNRNPC-230ENST00000557201 KCNA6P17658 529 aa16.65■□□□□ 0.26
HNRNPC-230ENST00000557201 TMEM94Q12767 1356 aa16.65■□□□□ 0.26
HNRNPC-230ENST00000557201 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
HNRNPC-230ENST00000557201 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
HNRNPC-230ENST00000557201 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
HNRNPC-230ENST00000557201 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms