RNA–Protein interactions for RNA: ENST00000557058.1

ITGA7-217, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 1,040 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-217ENST00000557058 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
ITGA7-217ENST00000557058 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.2
ITGA7-217ENST00000557058 FAM50AQ14320 339 aaKnown RBP22.52■■□□□ 1.2
ITGA7-217ENST00000557058 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
ITGA7-217ENST00000557058 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
ITGA7-217ENST00000557058 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
ITGA7-217ENST00000557058 A2MP01023 1474 aa22.49■■□□□ 1.19
ITGA7-217ENST00000557058 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
ITGA7-217ENST00000557058 RTEL1-TNFRSF6BF6WH68 1400 aa22.44■■□□□ 1.18
ITGA7-217ENST00000557058 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
ITGA7-217ENST00000557058 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
ITGA7-217ENST00000557058 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
ITGA7-217ENST00000557058 ITGAEP38570 1179 aa22.42■■□□□ 1.18
ITGA7-217ENST00000557058 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
ITGA7-217ENST00000557058 CLTCQ00610 1675 aaKnown RBP22.41■■□□□ 1.18
ITGA7-217ENST00000557058 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
ITGA7-217ENST00000557058 PLA2R1Q13018 1463 aa22.39■■□□□ 1.17
ITGA7-217ENST00000557058 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.17
ITGA7-217ENST00000557058 ZNF644Q9H582 1327 aaPredicted RBP22.38■■□□□ 1.17
ITGA7-217ENST00000557058 GGT6Q6P531 493 aa22.38■■□□□ 1.17
ITGA7-217ENST00000557058 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
ITGA7-217ENST00000557058 PKD2Q13563 968 aa22.36■■□□□ 1.17
ITGA7-217ENST00000557058 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
ITGA7-217ENST00000557058 DHX29Q7Z478 1369 aaKnown RBP22.36■■□□□ 1.17
ITGA7-217ENST00000557058 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
ITGA7-217ENST00000557058 CEP170BQ9Y4F5 1589 aaPredicted RBP22.33■■□□□ 1.17
ITGA7-217ENST00000557058 TOM1O60784 492 aa22.33■■□□□ 1.17
ITGA7-217ENST00000557058 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
ITGA7-217ENST00000557058 FAM135AQ9P2D6 1515 aa22.32■■□□□ 1.16
ITGA7-217ENST00000557058 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
ITGA7-217ENST00000557058 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
ITGA7-217ENST00000557058 ABCC5O15440 1437 aa22.31■■□□□ 1.16
ITGA7-217ENST00000557058 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
ITGA7-217ENST00000557058 CCDC141Q6ZP82 1450 aa22.3■■□□□ 1.16
ITGA7-217ENST00000557058 CAMSAP2Q08AD1 1489 aa22.29■■□□□ 1.16
ITGA7-217ENST00000557058 DAPK1P53355 1430 aa22.29■■□□□ 1.16
ITGA7-217ENST00000557058 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
ITGA7-217ENST00000557058 NAIPQ13075 1403 aa22.28■■□□□ 1.16
ITGA7-217ENST00000557058 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
ITGA7-217ENST00000557058 DNMT1P26358 1616 aaKnown RBP22.28■■□□□ 1.16
ITGA7-217ENST00000557058 ROCK1Q13464 1354 aa22.27■■□□□ 1.16
ITGA7-217ENST00000557058 KIF3BO15066 747 aa22.24■■□□□ 1.15
ITGA7-217ENST00000557058 ARHGEF5Q12774 1597 aa22.24■■□□□ 1.15
ITGA7-217ENST00000557058 KDM5DQ9BY66 1539 aa22.23■■□□□ 1.15
ITGA7-217ENST00000557058 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
ITGA7-217ENST00000557058 PZPP20742 1482 aa22.22■■□□□ 1.15
ITGA7-217ENST00000557058 TNRQ92752 1358 aa22.2■■□□□ 1.14
ITGA7-217ENST00000557058 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
ITGA7-217ENST00000557058 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
ITGA7-217ENST00000557058 CPS1P31327 1500 aa22.18■■□□□ 1.14
ITGA7-217ENST00000557058 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
ITGA7-217ENST00000557058 WASHC2CQ9Y4E1 1318 aa22.18■■□□□ 1.14
ITGA7-217ENST00000557058 SHANK2Q9UPX8 1470 aa22.17■■□□□ 1.14
ITGA7-217ENST00000557058 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
ITGA7-217ENST00000557058 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
ITGA7-217ENST00000557058 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
ITGA7-217ENST00000557058 NLRP1Q9C000 1473 aa22.15■■□□□ 1.14
ITGA7-217ENST00000557058 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.14
ITGA7-217ENST00000557058 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
ITGA7-217ENST00000557058 RRP7BPQ9NSQ0 103 aa22.14■■□□□ 1.13
ITGA7-217ENST00000557058 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
ITGA7-217ENST00000557058 THEMISQ8N1K5 641 aaPredicted RBP22.12■■□□□ 1.13
ITGA7-217ENST00000557058 NEURL4Q96JN8 1562 aa22.12■■□□□ 1.13
ITGA7-217ENST00000557058 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
ITGA7-217ENST00000557058 POTEAQ6S8J7 498 aa22.11■■□□□ 1.13
ITGA7-217ENST00000557058 RNF17Q9BXT8 1623 aaKnown RBP22.1■■□□□ 1.13
ITGA7-217ENST00000557058 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
ITGA7-217ENST00000557058 ZC3H13Q5T200 1668 aaKnown RBP22.08■■□□□ 1.13
ITGA7-217ENST00000557058 EIF2AK4Q9P2K8 1649 aaKnown RBP22.08■■□□□ 1.13
ITGA7-217ENST00000557058 MED14O60244 1454 aa22.08■■□□□ 1.12
ITGA7-217ENST00000557058 UGGT1Q9NYU2 1555 aa22.08■■□□□ 1.12
ITGA7-217ENST00000557058 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
ITGA7-217ENST00000557058 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
ITGA7-217ENST00000557058 DEPDC5O75140 1603 aa22.06■■□□□ 1.12
ITGA7-217ENST00000557058 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
ITGA7-217ENST00000557058 ABCC3O15438 1527 aa22.05■■□□□ 1.12
ITGA7-217ENST00000557058 SRCAPQ6ZRS2 3230 aa22.03■■□□□ 1.12
ITGA7-217ENST00000557058 NPHP4O75161 1426 aaPredicted RBP22.02■■□□□ 1.12
ITGA7-217ENST00000557058 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
ITGA7-217ENST00000557058 DUOX2Q9NRD8 1548 aa22■■□□□ 1.11
ITGA7-217ENST00000557058 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
ITGA7-217ENST00000557058 STRCP1A6NGW2 1772 aa21.98■■□□□ 1.11
ITGA7-217ENST00000557058 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
ITGA7-217ENST00000557058 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
ITGA7-217ENST00000557058 LRRC7Q96NW7 1537 aa21.95■■□□□ 1.1
ITGA7-217ENST00000557058 ERBINQ96RT1 1412 aa21.94■■□□□ 1.1
ITGA7-217ENST00000557058 ANKRD50Q9ULJ7 1429 aa21.94■■□□□ 1.1
ITGA7-217ENST00000557058 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
ITGA7-217ENST00000557058 PRDM15P57071 1507 aaPredicted RBP21.92■■□□□ 1.1
ITGA7-217ENST00000557058 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
ITGA7-217ENST00000557058 MPHOSPH9Q99550 1183 aa21.92■■□□□ 1.1
ITGA7-217ENST00000557058 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
ITGA7-217ENST00000557058 CEP152O94986 1710 aa21.91■■□□□ 1.1
ITGA7-217ENST00000557058 UBR1Q8IWV7 1749 aa21.9■■□□□ 1.1
ITGA7-217ENST00000557058 SLIT1O75093 1534 aa21.88■■□□□ 1.09
ITGA7-217ENST00000557058 ARHGAP23Q9P227 1491 aa21.88■■□□□ 1.09
ITGA7-217ENST00000557058 SYNMO15061 1565 aa21.87■■□□□ 1.09
ITGA7-217ENST00000557058 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
ITGA7-217ENST00000557058 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
ITGA7-217ENST00000557058 CFAP65Q6ZU64 1925 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms