RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 STRCP1A6NGW2 1772 aa20.91■□□□□ 0.94
PSEN1-220ENST00000557037 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
PSEN1-220ENST00000557037 RNF17Q9BXT8 1623 aaKnown RBP20.9■□□□□ 0.94
PSEN1-220ENST00000557037 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-220ENST00000557037 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
PSEN1-220ENST00000557037 INO80Q9ULG1 1556 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-220ENST00000557037 MED14O60244 1454 aa20.87■□□□□ 0.93
PSEN1-220ENST00000557037 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
PSEN1-220ENST00000557037 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
PSEN1-220ENST00000557037 GPATCH8Q9UKJ3 1502 aaKnown RBP20.82■□□□□ 0.92
PSEN1-220ENST00000557037 SYNMO15061 1565 aa20.81■□□□□ 0.92
PSEN1-220ENST00000557037 UGGT1Q9NYU2 1555 aa20.81■□□□□ 0.92
PSEN1-220ENST00000557037 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
PSEN1-220ENST00000557037 PZPP20742 1482 aa20.81■□□□□ 0.92
PSEN1-220ENST00000557037 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
PSEN1-220ENST00000557037 KIAA1107Q9UPP5 1409 aa20.79■□□□□ 0.92
PSEN1-220ENST00000557037 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-220ENST00000557037 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
PSEN1-220ENST00000557037 CCDC18Q5T9S5 1454 aa20.77■□□□□ 0.92
PSEN1-220ENST00000557037 KIF3BO15066 747 aa20.77■□□□□ 0.92
PSEN1-220ENST00000557037 UPF1Q92900 1129 aaKnown RBP eCLIP20.77■□□□□ 0.92
PSEN1-220ENST00000557037 NLRP1Q9C000 1473 aa20.76■□□□□ 0.91
PSEN1-220ENST00000557037 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
PSEN1-220ENST00000557037 WASHC2CQ9Y4E1 1318 aa20.75■□□□□ 0.91
PSEN1-220ENST00000557037 FAM135BQ49AJ0 1406 aa20.73■□□□□ 0.91
PSEN1-220ENST00000557037 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
PSEN1-220ENST00000557037 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
PSEN1-220ENST00000557037 DHX29Q7Z478 1369 aaKnown RBP20.72■□□□□ 0.91
PSEN1-220ENST00000557037 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
PSEN1-220ENST00000557037 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
PSEN1-220ENST00000557037 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
PSEN1-220ENST00000557037 TRIM52Q96A61 297 aa20.69■□□□□ 0.9
PSEN1-220ENST00000557037 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
PSEN1-220ENST00000557037 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
PSEN1-220ENST00000557037 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
PSEN1-220ENST00000557037 LTKP29376 864 aa20.62■□□□□ 0.89
PSEN1-220ENST00000557037 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
PSEN1-220ENST00000557037 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
PSEN1-220ENST00000557037 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
PSEN1-220ENST00000557037 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
PSEN1-220ENST00000557037 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
PSEN1-220ENST00000557037 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
PSEN1-220ENST00000557037 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
PSEN1-220ENST00000557037 JCADQ9P266 1359 aa20.57■□□□□ 0.88
PSEN1-220ENST00000557037 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
PSEN1-220ENST00000557037 MEX3CQ5U5Q3 659 aaKnown RBP20.56■□□□□ 0.88
PSEN1-220ENST00000557037 UBR1Q8IWV7 1749 aa20.54■□□□□ 0.88
PSEN1-220ENST00000557037 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
PSEN1-220ENST00000557037 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
PSEN1-220ENST00000557037 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
PSEN1-220ENST00000557037 PHLPP1O60346 1717 aa20.53■□□□□ 0.88
PSEN1-220ENST00000557037 CFAP65Q6ZU64 1925 aaKnown RBP20.53■□□□□ 0.88
PSEN1-220ENST00000557037 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-220ENST00000557037 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
PSEN1-220ENST00000557037 LRP6O75581 1613 aa20.51■□□□□ 0.87
PSEN1-220ENST00000557037 ABCC3O15438 1527 aa20.51■□□□□ 0.87
PSEN1-220ENST00000557037 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
PSEN1-220ENST00000557037 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
PSEN1-220ENST00000557037 MAP3K1Q13233 1512 aa20.5■□□□□ 0.87
PSEN1-220ENST00000557037 RXRBP28702 533 aa20.5■□□□□ 0.87
PSEN1-220ENST00000557037 ARHGAP23Q9P227 1491 aa20.5■□□□□ 0.87
PSEN1-220ENST00000557037 TIAM1Q13009 1591 aa20.49■□□□□ 0.87
PSEN1-220ENST00000557037 KCNA6P17658 529 aa20.48■□□□□ 0.87
PSEN1-220ENST00000557037 SLAIN2Q9P270 581 aa20.48■□□□□ 0.87
PSEN1-220ENST00000557037 CCDC141Q6ZP82 1450 aa20.48■□□□□ 0.87
PSEN1-220ENST00000557037 SLIT1O75093 1534 aa20.48■□□□□ 0.87
PSEN1-220ENST00000557037 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
PSEN1-220ENST00000557037 SPATA31A6Q5VVP1 1343 aa20.43■□□□□ 0.86
PSEN1-220ENST00000557037 MSH6P52701 1360 aa20.43■□□□□ 0.86
PSEN1-220ENST00000557037 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-220ENST00000557037 PRDM15P57071 1507 aaPredicted RBP20.4■□□□□ 0.86
PSEN1-220ENST00000557037 TMEM2Q9UHN6 1383 aa20.4■□□□□ 0.86
PSEN1-220ENST00000557037 CAMSAP2Q08AD1 1489 aa20.39■□□□□ 0.85
PSEN1-220ENST00000557037 NUTM2BA6NNL0 878 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-220ENST00000557037 NUTM2EB1AL46 878 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-220ENST00000557037 NUTM2AQ8IVF1 878 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-220ENST00000557037 STAG3Q9UJ98 1225 aa20.38■□□□□ 0.85
PSEN1-220ENST00000557037 CEP152O94986 1710 aa20.38■□□□□ 0.85
PSEN1-220ENST00000557037 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-220ENST00000557037 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
PSEN1-220ENST00000557037 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
PSEN1-220ENST00000557037 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
PSEN1-220ENST00000557037 FGD6Q6ZV73 1430 aa20.36■□□□□ 0.85
PSEN1-220ENST00000557037 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
PSEN1-220ENST00000557037 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
PSEN1-220ENST00000557037 MROH1Q8NDA8 1641 aa20.34■□□□□ 0.85
PSEN1-220ENST00000557037 AFF2P51816 1311 aa20.33■□□□□ 0.85
PSEN1-220ENST00000557037 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-220ENST00000557037 BCANQ96GW7 911 aa20.33■□□□□ 0.85
PSEN1-220ENST00000557037 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
PSEN1-220ENST00000557037 TET3O43151 1660 aa20.32■□□□□ 0.84
PSEN1-220ENST00000557037 RGS12O14924 1447 aa20.31■□□□□ 0.84
PSEN1-220ENST00000557037 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
PSEN1-220ENST00000557037 NWD1Q149M9 1564 aa20.3■□□□□ 0.84
PSEN1-220ENST00000557037 ZRANB1Q9UGI0 708 aa20.3■□□□□ 0.84
PSEN1-220ENST00000557037 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
PSEN1-220ENST00000557037 C14orf37Q86TY3 774 aa20.28■□□□□ 0.84
PSEN1-220ENST00000557037 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
PSEN1-220ENST00000557037 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
PSEN1-220ENST00000557037 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms