RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PTPRMP28827 1452 aa15.64■□□□□ 0.09
HNRNPC-228ENST00000557033 GTPBP6O43824 516 aaPredicted RBP15.63■□□□□ 0.09
HNRNPC-228ENST00000557033 ATP10AO60312 1499 aa15.63■□□□□ 0.09
HNRNPC-228ENST00000557033 CDC42BPAQ5VT25 1732 aa15.61■□□□□ 0.09
HNRNPC-228ENST00000557033 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
HNRNPC-228ENST00000557033 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
HNRNPC-228ENST00000557033 KDM5CP41229 1560 aa15.61■□□□□ 0.09
HNRNPC-228ENST00000557033 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
HNRNPC-228ENST00000557033 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
HNRNPC-228ENST00000557033 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
HNRNPC-228ENST00000557033 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
HNRNPC-228ENST00000557033 MADDQ8WXG6 1647 aa15.59■□□□□ 0.09
HNRNPC-228ENST00000557033 GSE1Q14687 1217 aa15.59■□□□□ 0.09
HNRNPC-228ENST00000557033 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
HNRNPC-228ENST00000557033 ABCC1P33527 1531 aa15.58■□□□□ 0.09
HNRNPC-228ENST00000557033 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.09
HNRNPC-228ENST00000557033 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.08
HNRNPC-228ENST00000557033 CFDP1Q9UEE9 299 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-228ENST00000557033 ZNF777Q9ULD5 760 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-228ENST00000557033 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
HNRNPC-228ENST00000557033 TRAPPC8Q9Y2L5 1435 aa15.57■□□□□ 0.08
HNRNPC-228ENST00000557033 SIGLEC1Q9BZZ2 1709 aa15.56■□□□□ 0.08
HNRNPC-228ENST00000557033 ITSN2Q9NZM3 1697 aa15.55■□□□□ 0.08
HNRNPC-228ENST00000557033 MLECQ14165 292 aa15.55■□□□□ 0.08
HNRNPC-228ENST00000557033 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
HNRNPC-228ENST00000557033 KIAA1107Q9UPP5 1409 aa15.54■□□□□ 0.08
HNRNPC-228ENST00000557033 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
HNRNPC-228ENST00000557033 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
HNRNPC-228ENST00000557033 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
HNRNPC-228ENST00000557033 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.082e-7■■■■□ 19.9
HNRNPC-228ENST00000557033 SAMD9LQ8IVG5 1584 aa15.53■□□□□ 0.08
HNRNPC-228ENST00000557033 DIP2CQ9Y2E4 1556 aa15.52■□□□□ 0.07
HNRNPC-228ENST00000557033 RIOK3O14730 519 aaKnown RBP15.51■□□□□ 0.07
HNRNPC-228ENST00000557033 DSG3P32926 999 aa15.51■□□□□ 0.07
HNRNPC-228ENST00000557033 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
HNRNPC-228ENST00000557033 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
HNRNPC-228ENST00000557033 SPAG9O60271 1321 aaKnown RBP15.5■□□□□ 0.07
HNRNPC-228ENST00000557033 FER1L4A9Z1Z3 1794 aa15.49■□□□□ 0.07
HNRNPC-228ENST00000557033 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
HNRNPC-228ENST00000557033 AGLP35573 1532 aa15.49■□□□□ 0.07
HNRNPC-228ENST00000557033 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
HNRNPC-228ENST00000557033 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
HNRNPC-228ENST00000557033 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
HNRNPC-228ENST00000557033 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
HNRNPC-228ENST00000557033 NUBP1P53384 320 aa15.46■□□□□ 0.07
HNRNPC-228ENST00000557033 RSPH4AQ5TD94 716 aa15.46■□□□□ 0.07
HNRNPC-228ENST00000557033 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.06
HNRNPC-228ENST00000557033 MAP3K1Q13233 1512 aa15.45■□□□□ 0.06
HNRNPC-228ENST00000557033 NCOA2Q15596 1464 aa15.45■□□□□ 0.06
HNRNPC-228ENST00000557033 LMTK3Q96Q04 1460 aa15.45■□□□□ 0.06
HNRNPC-228ENST00000557033 ZNF644Q9H582 1327 aaPredicted RBP15.44■□□□□ 0.06
HNRNPC-228ENST00000557033 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-228ENST00000557033 LRRC9Q6ZRR7 1453 aa15.43■□□□□ 0.06
HNRNPC-228ENST00000557033 MBD5Q9P267 1494 aa15.43■□□□□ 0.06
HNRNPC-228ENST00000557033 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
HNRNPC-228ENST00000557033 STK25O00506 426 aa15.41■□□□□ 0.06
HNRNPC-228ENST00000557033 CEBPAP49715 358 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-228ENST00000557033 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
HNRNPC-228ENST00000557033 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
HNRNPC-228ENST00000557033 INO80Q9ULG1 1556 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-228ENST00000557033 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
HNRNPC-228ENST00000557033 A2MP01023 1474 aa15.4■□□□□ 0.06
HNRNPC-228ENST00000557033 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-228ENST00000557033 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-228ENST00000557033 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-228ENST00000557033 HSPA2P54652 639 aa15.37■□□□□ 0.05
HNRNPC-228ENST00000557033 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
HNRNPC-228ENST00000557033 CAMSAP2Q08AD1 1489 aa15.36■□□□□ 0.05
HNRNPC-228ENST00000557033 TSPY4P0CV99 314 aa15.36■□□□□ 0.05
HNRNPC-228ENST00000557033 TSPY10P0CW01 314 aa15.36■□□□□ 0.05
HNRNPC-228ENST00000557033 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
HNRNPC-228ENST00000557033 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
HNRNPC-228ENST00000557033 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
HNRNPC-228ENST00000557033 C3P01024 1663 aa15.35■□□□□ 0.05
HNRNPC-228ENST00000557033 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
HNRNPC-228ENST00000557033 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
HNRNPC-228ENST00000557033 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-228ENST00000557033 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
HNRNPC-228ENST00000557033 GGT6Q6P531 493 aa15.33■□□□□ 0.04
HNRNPC-228ENST00000557033 RYDENQ9NUL5 291 aaKnown RBP15.33■□□□□ 0.04
HNRNPC-228ENST00000557033 ZMYM3Q14202 1370 aa15.33■□□□□ 0.04
HNRNPC-228ENST00000557033 ARHGEF5Q12774 1597 aa15.32■□□□□ 0.04
HNRNPC-228ENST00000557033 UHRF1BP1Q6BDS2 1440 aa15.32■□□□□ 0.04
HNRNPC-228ENST00000557033 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
HNRNPC-228ENST00000557033 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-228ENST00000557033 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
HNRNPC-228ENST00000557033 CHRM1P11229 460 aaPredicted RBP15.3■□□□□ 0.04
HNRNPC-228ENST00000557033 NPATQ14207 1427 aa15.29■□□□□ 0.04
HNRNPC-228ENST00000557033 HOMEZQ8IX15 550 aa15.29■□□□□ 0.04
HNRNPC-228ENST00000557033 KIF3BO15066 747 aa15.28■□□□□ 0.04
HNRNPC-228ENST00000557033 CLTCQ00610 1675 aaKnown RBP15.27■□□□□ 0.03
HNRNPC-228ENST00000557033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
HNRNPC-228ENST00000557033 MAST1Q9Y2H9 1570 aa15.25■□□□□ 0.03
HNRNPC-228ENST00000557033 STK24Q9Y6E0 443 aa15.25■□□□□ 0.03
HNRNPC-228ENST00000557033 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
HNRNPC-228ENST00000557033 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
HNRNPC-228ENST00000557033 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
HNRNPC-228ENST00000557033 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
HNRNPC-228ENST00000557033 WASHC2CQ9Y4E1 1318 aa15.22■□□□□ 0.03
HNRNPC-228ENST00000557033 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms