RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 KIF15Q9NS87 1388 aa34.64■■■■□ 3.14
PABPN1-206ENST00000556809 FAM50AQ14320 339 aaKnown RBP34.63■■■■□ 3.13
PABPN1-206ENST00000556809 NPATQ14207 1427 aa34.63■■■■□ 3.13
PABPN1-206ENST00000556809 KDM5DQ9BY66 1539 aa34.61■■■■□ 3.13
PABPN1-206ENST00000556809 HSPA2P54652 639 aa34.61■■■■□ 3.13
PABPN1-206ENST00000556809 RRP7BPQ9NSQ0 103 aa34.6■■■■□ 3.13
PABPN1-206ENST00000556809 PTPRKQ15262 1439 aa34.59■■■■□ 3.13
PABPN1-206ENST00000556809 UHRF1BP1Q6BDS2 1440 aa34.59■■■■□ 3.13
PABPN1-206ENST00000556809 MROH1Q8NDA8 1641 aa34.59■■■■□ 3.13
PABPN1-206ENST00000556809 NCOA1Q15788 1441 aa34.58■■■■□ 3.13
PABPN1-206ENST00000556809 CHIC2Q9UKJ5 165 aa34.58■■■■□ 3.13
PABPN1-206ENST00000556809 ADGRL2O95490 1459 aa34.58■■■■□ 3.13
PABPN1-206ENST00000556809 ERBINQ96RT1 1412 aa34.57■■■■□ 3.13
PABPN1-206ENST00000556809 ANKRD30AQ9BXX3 1397 aa34.57■■■■□ 3.12
PABPN1-206ENST00000556809 WASHC2CQ9Y4E1 1318 aa34.55■■■■□ 3.12
PABPN1-206ENST00000556809 ZC3H13Q5T200 1668 aaKnown RBP34.5■■■■□ 3.11
PABPN1-206ENST00000556809 ABCC3O15438 1527 aa34.5■■■■□ 3.11
PABPN1-206ENST00000556809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.49■■■■□ 3.111e-10■□□□□ 11
PABPN1-206ENST00000556809 PZPP20742 1482 aa34.48■■■■□ 3.11
PABPN1-206ENST00000556809 DEPDC5O75140 1603 aa34.48■■■■□ 3.11
PABPN1-206ENST00000556809 PRDM15P57071 1507 aaPredicted RBP34.46■■■■□ 3.11
PABPN1-206ENST00000556809 MYO3AQ8NEV4 1616 aa34.44■■■■□ 3.1
PABPN1-206ENST00000556809 CEP152O94986 1710 aa34.43■■■■□ 3.1
PABPN1-206ENST00000556809 ZNF142P52746 1687 aaPredicted RBP34.42■■■■□ 3.1
PABPN1-206ENST00000556809 FBXO31Q5XUX0 539 aaPredicted RBP34.42■■■■□ 3.1
PABPN1-206ENST00000556809 STRCQ7RTU9 1775 aa34.41■■■■□ 3.1
PABPN1-206ENST00000556809 RRBP1Q9P2E9 1410 aaKnown RBP34.4■■■■□ 3.1
PABPN1-206ENST00000556809 CAMSAP1Q5T5Y3 1602 aa34.38■■■■□ 3.09
PABPN1-206ENST00000556809 ROCK1Q13464 1354 aa34.36■■■■□ 3.09
PABPN1-206ENST00000556809 CEP170BQ9Y4F5 1589 aaPredicted RBP34.36■■■■□ 3.09
PABPN1-206ENST00000556809 ANKRD50Q9ULJ7 1429 aa34.35■■■■□ 3.09
PABPN1-206ENST00000556809 VWDEQ8N2E2 1590 aa34.35■■■■□ 3.09
PABPN1-206ENST00000556809 TNRQ92752 1358 aa34.34■■■■□ 3.09
PABPN1-206ENST00000556809 SPATA31D1Q6ZQQ2 1576 aa34.31■■■■□ 3.08
PABPN1-206ENST00000556809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.3■■■■□ 3.082e-13■□□□□ 10.7
PABPN1-206ENST00000556809 A2ML1A8K2U0 1454 aa34.3■■■■□ 3.08
PABPN1-206ENST00000556809 ARHGAP31Q2M1Z3 1444 aa34.3■■■■□ 3.08
PABPN1-206ENST00000556809 LMTK2Q8IWU2 1503 aa34.29■■■■□ 3.08
PABPN1-206ENST00000556809 KANK1Q14678 1352 aa34.27■■■■□ 3.08
PABPN1-206ENST00000556809 ITGAEP38570 1179 aa34.27■■■■□ 3.08
PABPN1-206ENST00000556809 ERVK-7P63135 1459 aa34.27■■■■□ 3.08
PABPN1-206ENST00000556809 CFAP65Q6ZU64 1925 aaKnown RBP34.25■■■■□ 3.07
PABPN1-206ENST00000556809 NLRP1Q9C000 1473 aa34.23■■■■□ 3.07
PABPN1-206ENST00000556809 PLA2R1Q13018 1463 aa34.22■■■■□ 3.07
PABPN1-206ENST00000556809 DMRT2Q9Y5R5 561 aa34.21■■■■□ 3.07
PABPN1-206ENST00000556809 UNC13BO14795 1591 aa34.19■■■■□ 3.06
PABPN1-206ENST00000556809 PTPRTO14522 1441 aa34.18■■■■□ 3.06
PABPN1-206ENST00000556809 EFCAB6Q5THR3 1501 aa34.15■■■■□ 3.06
PABPN1-206ENST00000556809 UGGT1Q9NYU2 1555 aa34.12■■■■□ 3.05
PABPN1-206ENST00000556809 NCKAP5LQ9HCH0 1330 aa34.11■■■■□ 3.05
PABPN1-206ENST00000556809 PKD2Q13563 968 aa34.1■■■■□ 3.05
PABPN1-206ENST00000556809 TET3O43151 1660 aa34.09■■■■□ 3.05
PABPN1-206ENST00000556809 IQGAP3Q86VI3 1631 aa34.06■■■■□ 3.04
PABPN1-206ENST00000556809 THEMISQ8N1K5 641 aaPredicted RBP34.06■■■■□ 3.04
PABPN1-206ENST00000556809 GCC2Q8IWJ2 1684 aa34.06■■■■□ 3.04
PABPN1-206ENST00000556809 NOS1P29475 1434 aa34.04■■■■□ 3.04
PABPN1-206ENST00000556809 UBR1Q8IWV7 1749 aa34.04■■■■□ 3.04
PABPN1-206ENST00000556809 RPRD2Q5VT52 1461 aaKnown RBP34.04■■■■□ 3.04
PABPN1-206ENST00000556809 POLR1AO95602 1720 aaPredicted RBP34.04■■■■□ 3.04
PABPN1-206ENST00000556809 NAIPQ13075 1403 aa34.04■■■■□ 3.04
PABPN1-206ENST00000556809 SYNMO15061 1565 aa34.02■■■■□ 3.04
PABPN1-206ENST00000556809 NEURL4Q96JN8 1562 aa34.01■■■■□ 3.03
PABPN1-206ENST00000556809 PIK3C2BO00750 1634 aa33.98■■■■□ 3.03
PABPN1-206ENST00000556809 NUP155O75694 1391 aa33.98■■■■□ 3.03
PABPN1-206ENST00000556809 E9PCH4 1651 aa33.97■■■■□ 3.03
PABPN1-206ENST00000556809 HFM1A2PYH4 1435 aa33.96■■■■□ 3.03
PABPN1-206ENST00000556809 KDM5AP29375 1690 aaKnown RBP33.94■■■■□ 3.02
PABPN1-206ENST00000556809 ANKLE2Q86XL3 938 aa33.94■■■■□ 3.02
PABPN1-206ENST00000556809 IDI1Q13907 227 aa33.93■■■■□ 3.02
PABPN1-206ENST00000556809 MED14O60244 1454 aa33.92■■■■□ 3.02
PABPN1-206ENST00000556809 LTBP4Q8N2S1 1624 aa33.92■■■■□ 3.02
PABPN1-206ENST00000556809 ILDR1Q86SU0 546 aaPredicted RBP33.91■■■■□ 3.02
PABPN1-206ENST00000556809 ARHGAP23Q9P227 1491 aa33.9■■■■□ 3.02
PABPN1-206ENST00000556809 CERKQ8TCT0 537 aa33.9■■■■□ 3.02
PABPN1-206ENST00000556809 SLIT1O75093 1534 aa33.89■■■■□ 3.02
PABPN1-206ENST00000556809 SLC52A1Q9NWF4 448 aa33.89■■■■□ 3.02
PABPN1-206ENST00000556809 NPHP4O75161 1426 aaPredicted RBP33.83■■■■□ 3.01
PABPN1-206ENST00000556809 ADGRB3O60242 1522 aa33.83■■■■□ 3.01
PABPN1-206ENST00000556809 IQGAP1P46940 1657 aa33.81■■■■□ 3
PABPN1-206ENST00000556809 FBXO41Q8TF61 875 aa33.81■■■■□ 3
PABPN1-206ENST00000556809 TMEM2Q9UHN6 1383 aa33.81■■■■□ 3
PABPN1-206ENST00000556809 ZNF335Q9H4Z2 1342 aaPredicted RBP33.8■■■■□ 3
PABPN1-206ENST00000556809 LTKP29376 864 aa33.8■■■■□ 3
PABPN1-206ENST00000556809 SCAF11Q99590 1463 aaKnown RBP33.8■■■■□ 3
PABPN1-206ENST00000556809 STAG3Q9UJ98 1225 aa33.78■■■■□ 3
PABPN1-206ENST00000556809 MYO5BQ9ULV0 1848 aa33.75■■■□□ 2.99
PABPN1-206ENST00000556809 TXNDC2Q86VQ3 553 aa33.75■■■□□ 2.99
PABPN1-206ENST00000556809 TMEM131LA2VDJ0 1609 aa33.75■■■□□ 2.99
PABPN1-206ENST00000556809 SPHKAPQ2M3C7 1700 aa33.73■■■□□ 2.99
PABPN1-206ENST00000556809 EID1Q9Y6B2 187 aa33.7■■■□□ 2.99
PABPN1-206ENST00000556809 IQSEC2Q5JU85 1478 aa33.69■■■□□ 2.98
PABPN1-206ENST00000556809 TRIM52Q96A61 297 aa33.67■■■□□ 2.98
PABPN1-206ENST00000556809 ZFYVE9O95405 1425 aa33.65■■■□□ 2.98
PABPN1-206ENST00000556809 CPS1P31327 1500 aa33.61■■■□□ 2.97
PABPN1-206ENST00000556809 STRCP1A6NGW2 1772 aa33.61■■■□□ 2.97
PABPN1-206ENST00000556809 TRPM2O94759 1503 aa33.6■■■□□ 2.97
PABPN1-206ENST00000556809 RIMS2Q9UQ26 1411 aa33.59■■■□□ 2.97
PABPN1-206ENST00000556809 SLC4A1APQ9BWU0 796 aaKnown RBP33.58■■■□□ 2.97
PABPN1-206ENST00000556809 SETD5Q9C0A6 1442 aa33.58■■■□□ 2.97
PABPN1-206ENST00000556809 CLTCL1P53675 1640 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms