RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
MTHFD1-214ENST00000556771 KIF15Q9NS87 1388 aa16.18■□□□□ 0.18
MTHFD1-214ENST00000556771 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
MTHFD1-214ENST00000556771 KIF3BO15066 747 aa16.17■□□□□ 0.18
MTHFD1-214ENST00000556771 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
MTHFD1-214ENST00000556771 GGT6Q6P531 493 aa16.16■□□□□ 0.18
MTHFD1-214ENST00000556771 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
MTHFD1-214ENST00000556771 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
MTHFD1-214ENST00000556771 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-214ENST00000556771 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
MTHFD1-214ENST00000556771 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
MTHFD1-214ENST00000556771 C3P01024 1663 aa16.12■□□□□ 0.17
MTHFD1-214ENST00000556771 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
MTHFD1-214ENST00000556771 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
MTHFD1-214ENST00000556771 CLTCQ00610 1675 aaKnown RBP16.11■□□□□ 0.17
MTHFD1-214ENST00000556771 MSH5O43196 834 aa16.1■□□□□ 0.17
MTHFD1-214ENST00000556771 ZMYM3Q14202 1370 aa16.1■□□□□ 0.17
MTHFD1-214ENST00000556771 NPATQ14207 1427 aa16.1■□□□□ 0.17
MTHFD1-214ENST00000556771 SETD1BQ9UPS6 1966 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-214ENST00000556771 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-214ENST00000556771 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
MTHFD1-214ENST00000556771 PTPRKQ15262 1439 aa16.08■□□□□ 0.16
MTHFD1-214ENST00000556771 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-214ENST00000556771 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
MTHFD1-214ENST00000556771 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
MTHFD1-214ENST00000556771 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
MTHFD1-214ENST00000556771 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
MTHFD1-214ENST00000556771 ANKRD50Q9ULJ7 1429 aa16.06■□□□□ 0.16
MTHFD1-214ENST00000556771 ABCC3O15438 1527 aa16.05■□□□□ 0.16
MTHFD1-214ENST00000556771 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
MTHFD1-214ENST00000556771 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
MTHFD1-214ENST00000556771 KANK1Q14678 1352 aa16.04■□□□□ 0.16
MTHFD1-214ENST00000556771 PZPP20742 1482 aa16.03■□□□□ 0.16
MTHFD1-214ENST00000556771 ITGAEP38570 1179 aa16.03■□□□□ 0.16
MTHFD1-214ENST00000556771 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
MTHFD1-214ENST00000556771 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
MTHFD1-214ENST00000556771 CAMSAP1Q5T5Y3 1602 aa15.99■□□□□ 0.15
MTHFD1-214ENST00000556771 CEP152O94986 1710 aa15.99■□□□□ 0.15
MTHFD1-214ENST00000556771 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
MTHFD1-214ENST00000556771 UNC13BO14795 1591 aa15.97■□□□□ 0.15
MTHFD1-214ENST00000556771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.157e-8■■■■□ 25
MTHFD1-214ENST00000556771 ZNF142P52746 1687 aaPredicted RBP15.96■□□□□ 0.15
MTHFD1-214ENST00000556771 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
MTHFD1-214ENST00000556771 TNRQ92752 1358 aa15.96■□□□□ 0.15
MTHFD1-214ENST00000556771 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
MTHFD1-214ENST00000556771 SPATA31D1Q6ZQQ2 1576 aa15.95■□□□□ 0.14
MTHFD1-214ENST00000556771 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
MTHFD1-214ENST00000556771 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
MTHFD1-214ENST00000556771 NAIPQ13075 1403 aa15.94■□□□□ 0.14
MTHFD1-214ENST00000556771 NLRP1Q9C000 1473 aa15.93■□□□□ 0.14
MTHFD1-214ENST00000556771 EFCAB6Q5THR3 1501 aa15.93■□□□□ 0.14
MTHFD1-214ENST00000556771 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
MTHFD1-214ENST00000556771 A2ML1A8K2U0 1454 aa15.92■□□□□ 0.14
MTHFD1-214ENST00000556771 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
MTHFD1-214ENST00000556771 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
MTHFD1-214ENST00000556771 TET3O43151 1660 aa15.92■□□□□ 0.14
MTHFD1-214ENST00000556771 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
MTHFD1-214ENST00000556771 HSPA2P54652 639 aa15.91■□□□□ 0.14
MTHFD1-214ENST00000556771 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
MTHFD1-214ENST00000556771 NUP155O75694 1391 aa15.88■□□□□ 0.13
MTHFD1-214ENST00000556771 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
MTHFD1-214ENST00000556771 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
MTHFD1-214ENST00000556771 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
MTHFD1-214ENST00000556771 CFAP65Q6ZU64 1925 aaKnown RBP15.86■□□□□ 0.13
MTHFD1-214ENST00000556771 NOS1P29475 1434 aa15.85■□□□□ 0.13
MTHFD1-214ENST00000556771 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
MTHFD1-214ENST00000556771 THEMISQ8N1K5 641 aaPredicted RBP15.84■□□□□ 0.13
MTHFD1-214ENST00000556771 PKD2Q13563 968 aa15.83■□□□□ 0.12
MTHFD1-214ENST00000556771 STRCQ7RTU9 1775 aa15.82■□□□□ 0.12
MTHFD1-214ENST00000556771 E9PCH4 1651 aa15.82■□□□□ 0.12
MTHFD1-214ENST00000556771 PTPRTO14522 1441 aa15.81■□□□□ 0.12
MTHFD1-214ENST00000556771 SYNMO15061 1565 aa15.81■□□□□ 0.12
MTHFD1-214ENST00000556771 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
MTHFD1-214ENST00000556771 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
MTHFD1-214ENST00000556771 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
MTHFD1-214ENST00000556771 UBR1Q8IWV7 1749 aa15.79■□□□□ 0.12
MTHFD1-214ENST00000556771 SETD5Q9C0A6 1442 aa15.78■□□□□ 0.12
MTHFD1-214ENST00000556771 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
MTHFD1-214ENST00000556771 PIK3C2BO00750 1634 aa15.78■□□□□ 0.12
MTHFD1-214ENST00000556771 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
MTHFD1-214ENST00000556771 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.11
MTHFD1-214ENST00000556771 IDI1Q13907 227 aa15.76■□□□□ 0.11
MTHFD1-214ENST00000556771 ANKLE2Q86XL3 938 aa15.76■□□□□ 0.11
MTHFD1-214ENST00000556771 ADGRB3O60242 1522 aa15.75■□□□□ 0.11
MTHFD1-214ENST00000556771 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
MTHFD1-214ENST00000556771 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
MTHFD1-214ENST00000556771 SLIT1O75093 1534 aa15.74■□□□□ 0.11
MTHFD1-214ENST00000556771 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
MTHFD1-214ENST00000556771 ARHGAP23Q9P227 1491 aa15.74■□□□□ 0.11
MTHFD1-214ENST00000556771 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
MTHFD1-214ENST00000556771 MED14O60244 1454 aa15.72■□□□□ 0.11
MTHFD1-214ENST00000556771 TMEM2Q9UHN6 1383 aa15.72■□□□□ 0.11
MTHFD1-214ENST00000556771 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
MTHFD1-214ENST00000556771 HRCP23327 699 aa15.71■□□□□ 0.11
MTHFD1-214ENST00000556771 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
MTHFD1-214ENST00000556771 TRPM2O94759 1503 aa15.71■□□□□ 0.11
MTHFD1-214ENST00000556771 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
MTHFD1-214ENST00000556771 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.1
MTHFD1-214ENST00000556771 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
MTHFD1-214ENST00000556771 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms