RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
SHMT2-224ENST00000556737 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
SHMT2-224ENST00000556737 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
SHMT2-224ENST00000556737 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
SHMT2-224ENST00000556737 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
SHMT2-224ENST00000556737 GGT6Q6P531 493 aa16.17■□□□□ 0.18
SHMT2-224ENST00000556737 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
SHMT2-224ENST00000556737 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
SHMT2-224ENST00000556737 ABCC3O15438 1527 aa16.14■□□□□ 0.18
SHMT2-224ENST00000556737 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-224ENST00000556737 KIF3BO15066 747 aa16.14■□□□□ 0.17
SHMT2-224ENST00000556737 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
SHMT2-224ENST00000556737 PZPP20742 1482 aa16.14■□□□□ 0.17
SHMT2-224ENST00000556737 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-224ENST00000556737 CEP152O94986 1710 aa16.13■□□□□ 0.17
SHMT2-224ENST00000556737 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
SHMT2-224ENST00000556737 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
SHMT2-224ENST00000556737 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
SHMT2-224ENST00000556737 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
SHMT2-224ENST00000556737 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
SHMT2-224ENST00000556737 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
SHMT2-224ENST00000556737 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
SHMT2-224ENST00000556737 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
SHMT2-224ENST00000556737 PLA2R1Q13018 1463 aa16.05■□□□□ 0.16
SHMT2-224ENST00000556737 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
SHMT2-224ENST00000556737 TNRQ92752 1358 aa16.04■□□□□ 0.16
SHMT2-224ENST00000556737 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
SHMT2-224ENST00000556737 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
SHMT2-224ENST00000556737 PTPRTO14522 1441 aa16.03■□□□□ 0.16
SHMT2-224ENST00000556737 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-224ENST00000556737 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
SHMT2-224ENST00000556737 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
SHMT2-224ENST00000556737 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
SHMT2-224ENST00000556737 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-224ENST00000556737 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
SHMT2-224ENST00000556737 NLRP1Q9C000 1473 aa16■□□□□ 0.15
SHMT2-224ENST00000556737 FAM50AQ14320 339 aaKnown RBP16■□□□□ 0.15
SHMT2-224ENST00000556737 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
SHMT2-224ENST00000556737 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
SHMT2-224ENST00000556737 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
SHMT2-224ENST00000556737 UNC13BO14795 1591 aa15.98■□□□□ 0.15
SHMT2-224ENST00000556737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHMT2-224ENST00000556737 LTBP4Q8N2S1 1624 aa15.97■□□□□ 0.15
SHMT2-224ENST00000556737 UBR1Q8IWV7 1749 aa15.97■□□□□ 0.15
SHMT2-224ENST00000556737 UGGT1Q9NYU2 1555 aa15.96■□□□□ 0.15
SHMT2-224ENST00000556737 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
SHMT2-224ENST00000556737 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
SHMT2-224ENST00000556737 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
SHMT2-224ENST00000556737 ROCK1Q13464 1354 aa15.95■□□□□ 0.14
SHMT2-224ENST00000556737 SYNMO15061 1565 aa15.94■□□□□ 0.14
SHMT2-224ENST00000556737 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
SHMT2-224ENST00000556737 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
SHMT2-224ENST00000556737 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
SHMT2-224ENST00000556737 TET3O43151 1660 aa15.92■□□□□ 0.14
SHMT2-224ENST00000556737 KANK1Q14678 1352 aa15.92■□□□□ 0.14
SHMT2-224ENST00000556737 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
SHMT2-224ENST00000556737 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
SHMT2-224ENST00000556737 PKD2Q13563 968 aa15.91■□□□□ 0.14
SHMT2-224ENST00000556737 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
SHMT2-224ENST00000556737 CERKQ8TCT0 537 aa15.9■□□□□ 0.14
SHMT2-224ENST00000556737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHMT2-224ENST00000556737 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
SHMT2-224ENST00000556737 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
SHMT2-224ENST00000556737 MED14O60244 1454 aa15.89■□□□□ 0.13
SHMT2-224ENST00000556737 NOS1P29475 1434 aa15.88■□□□□ 0.13
SHMT2-224ENST00000556737 IQGAP1P46940 1657 aa15.88■□□□□ 0.13
SHMT2-224ENST00000556737 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
SHMT2-224ENST00000556737 ARHGAP23Q9P227 1491 aa15.87■□□□□ 0.13
SHMT2-224ENST00000556737 SLIT1O75093 1534 aa15.87■□□□□ 0.13
SHMT2-224ENST00000556737 E9PCH4 1651 aa15.86■□□□□ 0.13
SHMT2-224ENST00000556737 IQSEC2Q5JU85 1478 aa15.86■□□□□ 0.13
SHMT2-224ENST00000556737 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
SHMT2-224ENST00000556737 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-224ENST00000556737 NPHP4O75161 1426 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-224ENST00000556737 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-224ENST00000556737 ITGAEP38570 1179 aa15.82■□□□□ 0.12
SHMT2-224ENST00000556737 SCAF11Q99590 1463 aaKnown RBP15.82■□□□□ 0.12
SHMT2-224ENST00000556737 MYO5BQ9ULV0 1848 aa15.8■□□□□ 0.12
SHMT2-224ENST00000556737 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
SHMT2-224ENST00000556737 NAIPQ13075 1403 aa15.79■□□□□ 0.12
SHMT2-224ENST00000556737 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
SHMT2-224ENST00000556737 CPS1P31327 1500 aa15.78■□□□□ 0.12
SHMT2-224ENST00000556737 TMEM131LA2VDJ0 1609 aa15.78■□□□□ 0.12
SHMT2-224ENST00000556737 TMEM2Q9UHN6 1383 aa15.77■□□□□ 0.12
SHMT2-224ENST00000556737 IDI1Q13907 227 aa15.76■□□□□ 0.11
SHMT2-224ENST00000556737 SPHKAPQ2M3C7 1700 aa15.76■□□□□ 0.11
SHMT2-224ENST00000556737 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
SHMT2-224ENST00000556737 NUP155O75694 1391 aa15.75■□□□□ 0.11
SHMT2-224ENST00000556737 LTKP29376 864 aa15.74■□□□□ 0.11
SHMT2-224ENST00000556737 ZFYVE9O95405 1425 aa15.73■□□□□ 0.11
SHMT2-224ENST00000556737 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
SHMT2-224ENST00000556737 ALKQ9UM73 1620 aa15.7■□□□□ 0.1
SHMT2-224ENST00000556737 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
SHMT2-224ENST00000556737 TRPM2O94759 1503 aa15.68■□□□□ 0.1
SHMT2-224ENST00000556737 LRRC7Q96NW7 1537 aa15.68■□□□□ 0.1
SHMT2-224ENST00000556737 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
SHMT2-224ENST00000556737 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
SHMT2-224ENST00000556737 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
SHMT2-224ENST00000556737 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
SHMT2-224ENST00000556737 EID1Q9Y6B2 187 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms