RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 HSPA2P54652 639 aa16.06■□□□□ 0.16
SNX6-208ENST00000556712 CEP152O94986 1710 aa16.05■□□□□ 0.16
SNX6-208ENST00000556712 ZMYM3Q14202 1370 aa16.05■□□□□ 0.16
SNX6-208ENST00000556712 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
SNX6-208ENST00000556712 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
SNX6-208ENST00000556712 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
SNX6-208ENST00000556712 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
SNX6-208ENST00000556712 UHRF1BP1Q6BDS2 1440 aa16.03■□□□□ 0.16
SNX6-208ENST00000556712 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
SNX6-208ENST00000556712 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
SNX6-208ENST00000556712 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.16
SNX6-208ENST00000556712 ABCC3O15438 1527 aa16.02■□□□□ 0.15
SNX6-208ENST00000556712 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
SNX6-208ENST00000556712 ERBINQ96RT1 1412 aa16.02■□□□□ 0.15
SNX6-208ENST00000556712 PRDM15P57071 1507 aaPredicted RBP16.01■□□□□ 0.15
SNX6-208ENST00000556712 NPATQ14207 1427 aa16.01■□□□□ 0.15
SNX6-208ENST00000556712 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
SNX6-208ENST00000556712 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
SNX6-208ENST00000556712 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
SNX6-208ENST00000556712 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
SNX6-208ENST00000556712 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
SNX6-208ENST00000556712 PZPP20742 1482 aa15.98■□□□□ 0.15
SNX6-208ENST00000556712 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SNX6-208ENST00000556712 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
SNX6-208ENST00000556712 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
SNX6-208ENST00000556712 CEP170BQ9Y4F5 1589 aaPredicted RBP15.97■□□□□ 0.15
SNX6-208ENST00000556712 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
SNX6-208ENST00000556712 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
SNX6-208ENST00000556712 ITGAEP38570 1179 aa15.93■□□□□ 0.14
SNX6-208ENST00000556712 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
SNX6-208ENST00000556712 TNRQ92752 1358 aa15.92■□□□□ 0.14
SNX6-208ENST00000556712 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
SNX6-208ENST00000556712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.145e-7■■□□□ 12.3
SNX6-208ENST00000556712 ANKRD50Q9ULJ7 1429 aa15.91■□□□□ 0.14
SNX6-208ENST00000556712 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
SNX6-208ENST00000556712 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
SNX6-208ENST00000556712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX6-208ENST00000556712 UNC13BO14795 1591 aa15.9■□□□□ 0.14
SNX6-208ENST00000556712 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
SNX6-208ENST00000556712 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
SNX6-208ENST00000556712 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
SNX6-208ENST00000556712 LMTK2Q8IWU2 1503 aa15.88■□□□□ 0.13
SNX6-208ENST00000556712 EFCAB6Q5THR3 1501 aa15.87■□□□□ 0.13
SNX6-208ENST00000556712 KANK1Q14678 1352 aa15.87■□□□□ 0.13
SNX6-208ENST00000556712 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
SNX6-208ENST00000556712 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
SNX6-208ENST00000556712 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
SNX6-208ENST00000556712 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
SNX6-208ENST00000556712 TET3O43151 1660 aa15.84■□□□□ 0.13
SNX6-208ENST00000556712 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
SNX6-208ENST00000556712 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.13
SNX6-208ENST00000556712 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
SNX6-208ENST00000556712 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
SNX6-208ENST00000556712 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
SNX6-208ENST00000556712 SYNMO15061 1565 aa15.82■□□□□ 0.12
SNX6-208ENST00000556712 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
SNX6-208ENST00000556712 NEURL4Q96JN8 1562 aa15.81■□□□□ 0.12
SNX6-208ENST00000556712 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
SNX6-208ENST00000556712 E9PCH4 1651 aa15.8■□□□□ 0.12
SNX6-208ENST00000556712 PTPRTO14522 1441 aa15.79■□□□□ 0.12
SNX6-208ENST00000556712 NAIPQ13075 1403 aa15.77■□□□□ 0.12
SNX6-208ENST00000556712 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
SNX6-208ENST00000556712 NOS1P29475 1434 aa15.75■□□□□ 0.11
SNX6-208ENST00000556712 RPRD2Q5VT52 1461 aaKnown RBP15.74■□□□□ 0.11
SNX6-208ENST00000556712 NUP155O75694 1391 aa15.74■□□□□ 0.11
SNX6-208ENST00000556712 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
SNX6-208ENST00000556712 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
SNX6-208ENST00000556712 ADGRB3O60242 1522 aa15.73■□□□□ 0.11
SNX6-208ENST00000556712 IQGAP1P46940 1657 aa15.73■□□□□ 0.11
SNX6-208ENST00000556712 LTBP4Q8N2S1 1624 aa15.72■□□□□ 0.11
SNX6-208ENST00000556712 PKD2Q13563 968 aa15.72■□□□□ 0.11
SNX6-208ENST00000556712 KDM5AP29375 1690 aaKnown RBP15.72■□□□□ 0.11
SNX6-208ENST00000556712 THEMISQ8N1K5 641 aaPredicted RBP15.71■□□□□ 0.11
SNX6-208ENST00000556712 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
SNX6-208ENST00000556712 SPHKAPQ2M3C7 1700 aa15.7■□□□□ 0.1
SNX6-208ENST00000556712 SLIT1O75093 1534 aa15.69■□□□□ 0.1
SNX6-208ENST00000556712 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
SNX6-208ENST00000556712 IDI1Q13907 227 aa15.68■□□□□ 0.1
SNX6-208ENST00000556712 NPHP4O75161 1426 aaPredicted RBP15.68■□□□□ 0.1
SNX6-208ENST00000556712 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
SNX6-208ENST00000556712 MED14O60244 1454 aa15.67■□□□□ 0.1
SNX6-208ENST00000556712 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
SNX6-208ENST00000556712 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
SNX6-208ENST00000556712 TMEM131LA2VDJ0 1609 aa15.66■□□□□ 0.1
SNX6-208ENST00000556712 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
SNX6-208ENST00000556712 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
SNX6-208ENST00000556712 TMEM2Q9UHN6 1383 aa15.63■□□□□ 0.09
SNX6-208ENST00000556712 STRCP1A6NGW2 1772 aa15.63■□□□□ 0.09
SNX6-208ENST00000556712 LTKP29376 864 aa15.63■□□□□ 0.09
SNX6-208ENST00000556712 CLTCL1P53675 1640 aa15.62■□□□□ 0.09
SNX6-208ENST00000556712 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
SNX6-208ENST00000556712 FBXO41Q8TF61 875 aa15.61■□□□□ 0.09
SNX6-208ENST00000556712 TRIM52Q96A61 297 aa15.61■□□□□ 0.09
SNX6-208ENST00000556712 TRPM2O94759 1503 aa15.6■□□□□ 0.09
SNX6-208ENST00000556712 TXNDC2Q86VQ3 553 aa15.6■□□□□ 0.09
SNX6-208ENST00000556712 ZFYVE9O95405 1425 aa15.59■□□□□ 0.09
SNX6-208ENST00000556712 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
SNX6-208ENST00000556712 EID1Q9Y6B2 187 aa15.58■□□□□ 0.08
SNX6-208ENST00000556712 RIMS2Q9UQ26 1411 aa15.58■□□□□ 0.08
SNX6-208ENST00000556712 CPS1P31327 1500 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms