RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 MAGI2Q86UL8 1455 aa28.98■■■□□ 2.23
RGMA-208ENST00000556658 KIF3BO15066 747 aa28.96■■■□□ 2.23
RGMA-208ENST00000556658 SIN3AQ96ST3 1273 aa28.96■■■□□ 2.23
RGMA-208ENST00000556658 FAM135AQ9P2D6 1515 aa28.96■■■□□ 2.23
RGMA-208ENST00000556658 DIP2CQ9Y2E4 1556 aa28.95■■■□□ 2.22
RGMA-208ENST00000556658 NEUROD1Q13562 356 aa28.95■■■□□ 2.22
RGMA-208ENST00000556658 PKD2Q13563 968 aa28.95■■■□□ 2.22
RGMA-208ENST00000556658 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
RGMA-208ENST00000556658 FOXD1Q16676 465 aa28.93■■■□□ 2.22
RGMA-208ENST00000556658 DEPDC5O75140 1603 aa28.93■■■□□ 2.22
RGMA-208ENST00000556658 COL17A1Q9UMD9 1497 aaPredicted RBP28.91■■■□□ 2.22
RGMA-208ENST00000556658 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
RGMA-208ENST00000556658 KANK1Q14678 1352 aa28.9■■■□□ 2.22
RGMA-208ENST00000556658 TIMELESSQ9UNS1 1208 aa28.89■■■□□ 2.21
RGMA-208ENST00000556658 ANKRD30BQ9BXX2 1392 aa28.89■■■□□ 2.21
RGMA-208ENST00000556658 BCORL1Q5H9F3 1711 aa28.86■■■□□ 2.21
RGMA-208ENST00000556658 ATP10AO60312 1499 aa28.85■■■□□ 2.21
RGMA-208ENST00000556658 RNF17Q9BXT8 1623 aaKnown RBP28.84■■■□□ 2.21
RGMA-208ENST00000556658 PRDM15P57071 1507 aaPredicted RBP28.84■■■□□ 2.21
RGMA-208ENST00000556658 MROH1Q8NDA8 1641 aa28.8■■■□□ 2.2
RGMA-208ENST00000556658 VWDEQ8N2E2 1590 aa28.8■■■□□ 2.2
RGMA-208ENST00000556658 TONSLQ96HA7 1378 aa28.79■■■□□ 2.2
RGMA-208ENST00000556658 REREQ9P2R6 1566 aa28.78■■■□□ 2.2
RGMA-208ENST00000556658 GGT6Q6P531 493 aa28.78■■■□□ 2.2
RGMA-208ENST00000556658 TET3O43151 1660 aa28.76■■■□□ 2.2
RGMA-208ENST00000556658 ARHGEF40Q8TER5 1519 aa28.76■■■□□ 2.19
RGMA-208ENST00000556658 RPRD2Q5VT52 1461 aaKnown RBP28.74■■■□□ 2.19
RGMA-208ENST00000556658 E9PCH4 1651 aa28.71■■■□□ 2.19
RGMA-208ENST00000556658 AGLP35573 1532 aa28.7■■■□□ 2.18
RGMA-208ENST00000556658 LMTK2Q8IWU2 1503 aa28.69■■■□□ 2.18
RGMA-208ENST00000556658 CEP152O94986 1710 aa28.68■■■□□ 2.18
RGMA-208ENST00000556658 WASHC2CQ9Y4E1 1318 aa28.68■■■□□ 2.18
RGMA-208ENST00000556658 EFCAB6Q5THR3 1501 aa28.64■■■□□ 2.18
RGMA-208ENST00000556658 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
RGMA-208ENST00000556658 CCDC144AA2RUR9 1427 aa28.64■■■□□ 2.18
RGMA-208ENST00000556658 ZC3H13Q5T200 1668 aaKnown RBP28.62■■■□□ 2.17
RGMA-208ENST00000556658 PLA2R1Q13018 1463 aa28.62■■■□□ 2.17
RGMA-208ENST00000556658 ABCC3O15438 1527 aa28.62■■■□□ 2.17
RGMA-208ENST00000556658 PPP6R1Q9UPN7 881 aa28.61■■■□□ 2.17
RGMA-208ENST00000556658 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
RGMA-208ENST00000556658 L3MBTL2Q969R5 705 aa28.59■■■□□ 2.17
RGMA-208ENST00000556658 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
RGMA-208ENST00000556658 PTPRTO14522 1441 aa28.57■■■□□ 2.16
RGMA-208ENST00000556658 CAMSAP1Q5T5Y3 1602 aa28.57■■■□□ 2.16
RGMA-208ENST00000556658 TRPM2O94759 1503 aa28.56■■■□□ 2.16
RGMA-208ENST00000556658 ARID4BQ4LE39 1312 aaPredicted RBP28.53■■■□□ 2.16
RGMA-208ENST00000556658 NPATQ14207 1427 aa28.52■■■□□ 2.16
RGMA-208ENST00000556658 CFAP65Q6ZU64 1925 aaKnown RBP28.51■■■□□ 2.15
RGMA-208ENST00000556658 MLECQ14165 292 aa28.51■■■□□ 2.15
RGMA-208ENST00000556658 ARHGAP31Q2M1Z3 1444 aa28.5■■■□□ 2.15
RGMA-208ENST00000556658 ESF1Q9H501 851 aaKnown RBP28.46■■■□□ 2.15
RGMA-208ENST00000556658 CLTCL1P53675 1640 aa28.44■■■□□ 2.14
RGMA-208ENST00000556658 CLTCQ00610 1675 aaKnown RBP28.44■■■□□ 2.14
RGMA-208ENST00000556658 CNTLNQ9NXG0 1405 aa28.44■■■□□ 2.14
RGMA-208ENST00000556658 RGL3Q3MIN7 710 aa28.41■■■□□ 2.14
RGMA-208ENST00000556658 KIF1BO60333 1816 aa28.39■■■□□ 2.14
RGMA-208ENST00000556658 DCAF11Q8TEB1 546 aa28.39■■■□□ 2.14
RGMA-208ENST00000556658 NOS1P29475 1434 aa28.39■■■□□ 2.14
RGMA-208ENST00000556658 ZNF316A6NFI3 1004 aaPredicted RBP28.38■■■□□ 2.13
RGMA-208ENST00000556658 SPATA31E1Q6ZUB1 1445 aa28.36■■■□□ 2.13
RGMA-208ENST00000556658 PREX1Q8TCU6 1659 aa28.35■■■□□ 2.13
RGMA-208ENST00000556658 UGGT1Q9NYU2 1555 aa28.35■■■□□ 2.13
RGMA-208ENST00000556658 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
RGMA-208ENST00000556658 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
RGMA-208ENST00000556658 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
RGMA-208ENST00000556658 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
RGMA-208ENST00000556658 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
RGMA-208ENST00000556658 SYNMO15061 1565 aa28.31■■■□□ 2.12
RGMA-208ENST00000556658 SLC52A1Q9NWF4 448 aa28.3■■■□□ 2.12
RGMA-208ENST00000556658 ZMYM3Q14202 1370 aa28.3■■■□□ 2.12
RGMA-208ENST00000556658 PIK3C2BO00750 1634 aa28.29■■■□□ 2.12
RGMA-208ENST00000556658 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
RGMA-208ENST00000556658 ERVK-7P63135 1459 aa28.28■■■□□ 2.12
RGMA-208ENST00000556658 FBXO31Q5XUX0 539 aaPredicted RBP28.27■■■□□ 2.12
RGMA-208ENST00000556658 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
RGMA-208ENST00000556658 CHGAP10645 457 aaKnown RBP28.26■■■□□ 2.11
RGMA-208ENST00000556658 SPATA31D1Q6ZQQ2 1576 aa28.23■■■□□ 2.11
RGMA-208ENST00000556658 FER1L4A9Z1Z3 1794 aa28.23■■■□□ 2.11
RGMA-208ENST00000556658 ADGRB3O60242 1522 aa28.23■■■□□ 2.11
RGMA-208ENST00000556658 IDI1Q13907 227 aa28.23■■■□□ 2.11
RGMA-208ENST00000556658 PRAG1Q86YV5 1406 aa28.21■■■□□ 2.11
RGMA-208ENST00000556658 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
RGMA-208ENST00000556658 RPGRIP1LQ68CZ1 1315 aa28.17■■■□□ 2.1
RGMA-208ENST00000556658 EIF4G2P78344 907 aaKnown RBP eCLIP28.15■■■□□ 2.1
RGMA-208ENST00000556658 IFT172Q9UG01 1749 aa28.15■■■□□ 2.1
RGMA-208ENST00000556658 TRPM1Q7Z4N2 1603 aa28.13■■■□□ 2.09
RGMA-208ENST00000556658 STAG3Q9UJ98 1225 aa28.12■■■□□ 2.09
RGMA-208ENST00000556658 TMEM131LA2VDJ0 1609 aa28.12■■■□□ 2.09
RGMA-208ENST00000556658 MYOM2P54296 1465 aa28.11■■■□□ 2.09
RGMA-208ENST00000556658 C3P01024 1663 aa28.11■■■□□ 2.09
RGMA-208ENST00000556658 PPLO60437 1756 aa28.11■■■□□ 2.09
RGMA-208ENST00000556658 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
RGMA-208ENST00000556658 ROCK2O75116 1388 aaKnown RBP28.1■■■□□ 2.09
RGMA-208ENST00000556658 TNRQ92752 1358 aa28.1■■■□□ 2.09
RGMA-208ENST00000556658 MYO5BQ9ULV0 1848 aa28.1■■■□□ 2.09
RGMA-208ENST00000556658 CARD11Q9BXL7 1154 aa28.09■■■□□ 2.09
RGMA-208ENST00000556658 HSPA5P11021 654 aaKnown RBP28.08■■■□□ 2.09
RGMA-208ENST00000556658 HIRIP3Q9BW71 556 aaPredicted RBP28.07■■■□□ 2.08
RGMA-208ENST00000556658 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
RGMA-208ENST00000556658 ADAMTSL3P82987 1691 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms