RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 SPAG9O60271 1321 aaKnown RBP16.29■□□□□ 0.2
SRSF5-216ENST00000556647 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
SRSF5-216ENST00000556647 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
SRSF5-216ENST00000556647 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
SRSF5-216ENST00000556647 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.2
SRSF5-216ENST00000556647 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.19
SRSF5-216ENST00000556647 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
SRSF5-216ENST00000556647 FBXO31Q5XUX0 539 aaPredicted RBP16.26■□□□□ 0.19
SRSF5-216ENST00000556647 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
SRSF5-216ENST00000556647 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
SRSF5-216ENST00000556647 PREX2Q70Z35 1606 aa16.25■□□□□ 0.19
SRSF5-216ENST00000556647 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
SRSF5-216ENST00000556647 TNRQ92752 1358 aa16.25■□□□□ 0.19
SRSF5-216ENST00000556647 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
SRSF5-216ENST00000556647 A2MP01023 1474 aa16.23■□□□□ 0.19
SRSF5-216ENST00000556647 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
SRSF5-216ENST00000556647 MED14O60244 1454 aa16.21■□□□□ 0.19
SRSF5-216ENST00000556647 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
SRSF5-216ENST00000556647 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
SRSF5-216ENST00000556647 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
SRSF5-216ENST00000556647 SYNMO15061 1565 aa16.18■□□□□ 0.18
SRSF5-216ENST00000556647 TRIM52Q96A61 297 aa16.18■□□□□ 0.18
SRSF5-216ENST00000556647 DEPDC5O75140 1603 aa16.18■□□□□ 0.18
SRSF5-216ENST00000556647 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
SRSF5-216ENST00000556647 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
SRSF5-216ENST00000556647 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
SRSF5-216ENST00000556647 UGGT1Q9NYU2 1555 aa16.16■□□□□ 0.18
SRSF5-216ENST00000556647 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
SRSF5-216ENST00000556647 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
SRSF5-216ENST00000556647 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
SRSF5-216ENST00000556647 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
SRSF5-216ENST00000556647 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
SRSF5-216ENST00000556647 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
SRSF5-216ENST00000556647 PZPP20742 1482 aa16.11■□□□□ 0.17
SRSF5-216ENST00000556647 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
SRSF5-216ENST00000556647 KIF3BO15066 747 aa16.09■□□□□ 0.17
SRSF5-216ENST00000556647 XIRP1Q702N8 1843 aaKnown RBP16.09■□□□□ 0.17
SRSF5-216ENST00000556647 WASHC2CQ9Y4E1 1318 aa16.09■□□□□ 0.17
SRSF5-216ENST00000556647 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.17
SRSF5-216ENST00000556647 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
SRSF5-216ENST00000556647 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
SRSF5-216ENST00000556647 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
SRSF5-216ENST00000556647 MEX3CQ5U5Q3 659 aaKnown RBP16.06■□□□□ 0.16
SRSF5-216ENST00000556647 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
SRSF5-216ENST00000556647 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
SRSF5-216ENST00000556647 EEA1Q15075 1411 aa16.05■□□□□ 0.16
SRSF5-216ENST00000556647 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
SRSF5-216ENST00000556647 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
SRSF5-216ENST00000556647 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
SRSF5-216ENST00000556647 JCADQ9P266 1359 aa16.04■□□□□ 0.16
SRSF5-216ENST00000556647 RXRBP28702 533 aa16.04■□□□□ 0.16
SRSF5-216ENST00000556647 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
SRSF5-216ENST00000556647 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
SRSF5-216ENST00000556647 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
SRSF5-216ENST00000556647 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
SRSF5-216ENST00000556647 TMEM94Q12767 1356 aa16■□□□□ 0.15
SRSF5-216ENST00000556647 PHLPP1O60346 1717 aa16■□□□□ 0.15
SRSF5-216ENST00000556647 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
SRSF5-216ENST00000556647 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SRSF5-216ENST00000556647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.157e-64■■□□□ 12.3
SRSF5-216ENST00000556647 SCAF11Q99590 1463 aaKnown RBP15.99■□□□□ 0.15
SRSF5-216ENST00000556647 LTKP29376 864 aa15.99■□□□□ 0.15
SRSF5-216ENST00000556647 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
SRSF5-216ENST00000556647 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
SRSF5-216ENST00000556647 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
SRSF5-216ENST00000556647 LRP6O75581 1613 aa15.96■□□□□ 0.15
SRSF5-216ENST00000556647 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
SRSF5-216ENST00000556647 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
SRSF5-216ENST00000556647 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
SRSF5-216ENST00000556647 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
SRSF5-216ENST00000556647 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
SRSF5-216ENST00000556647 EID1Q9Y6B2 187 aa15.94■□□□□ 0.14
SRSF5-216ENST00000556647 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
SRSF5-216ENST00000556647 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
SRSF5-216ENST00000556647 KCNA6P17658 529 aa15.92■□□□□ 0.14
SRSF5-216ENST00000556647 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
SRSF5-216ENST00000556647 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-216ENST00000556647 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
SRSF5-216ENST00000556647 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-216ENST00000556647 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-216ENST00000556647 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-216ENST00000556647 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-216ENST00000556647 MAP3K1Q13233 1512 aa15.9■□□□□ 0.14
SRSF5-216ENST00000556647 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
SRSF5-216ENST00000556647 MSH6P52701 1360 aa15.89■□□□□ 0.13
SRSF5-216ENST00000556647 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
SRSF5-216ENST00000556647 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
SRSF5-216ENST00000556647 COL16A1Q07092 1604 aaPredicted RBP15.88■□□□□ 0.13
SRSF5-216ENST00000556647 ARHGAP23Q9P227 1491 aa15.87■□□□□ 0.13
SRSF5-216ENST00000556647 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
SRSF5-216ENST00000556647 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
SRSF5-216ENST00000556647 SLIT1O75093 1534 aa15.86■□□□□ 0.13
SRSF5-216ENST00000556647 AFF2P51816 1311 aa15.86■□□□□ 0.13
SRSF5-216ENST00000556647 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
SRSF5-216ENST00000556647 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
SRSF5-216ENST00000556647 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
SRSF5-216ENST00000556647 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
SRSF5-216ENST00000556647 RGS12O14924 1447 aa15.84■□□□□ 0.13
SRSF5-216ENST00000556647 QTRT2Q9H974 415 aaKnown RBP15.83■□□□□ 0.12
SRSF5-216ENST00000556647 ABCC3O15438 1527 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms