RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 MADDQ8WXG6 1647 aa36.23■■■■□ 3.39
RCCD1-206ENST00000556618 PPP6R1Q9UPN7 881 aa36.19■■■■□ 3.38
RCCD1-206ENST00000556618 DEPDC5O75140 1603 aa36.19■■■■□ 3.38
RCCD1-206ENST00000556618 MROH1Q8NDA8 1641 aa36.19■■■■□ 3.38
RCCD1-206ENST00000556618 TRIM26Q12899 539 aaPredicted RBP36.17■■■■□ 3.38
RCCD1-206ENST00000556618 RIMS1Q86UR5 1692 aaKnown RBP36.15■■■■□ 3.38
RCCD1-206ENST00000556618 ESF1Q9H501 851 aaKnown RBP36.14■■■■□ 3.38
RCCD1-206ENST00000556618 PRDM15P57071 1507 aaPredicted RBP36.12■■■■□ 3.37
RCCD1-206ENST00000556618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.12■■■■□ 3.379e-7■■□□□ 14.1
RCCD1-206ENST00000556618 CLTCQ00610 1675 aaKnown RBP36.11■■■■□ 3.37
RCCD1-206ENST00000556618 CNTLNQ9NXG0 1405 aa36.09■■■■□ 3.37
RCCD1-206ENST00000556618 FAM135AQ9P2D6 1515 aa36.09■■■■□ 3.37
RCCD1-206ENST00000556618 WASHC2CQ9Y4E1 1318 aa36.08■■■■□ 3.37
RCCD1-206ENST00000556618 UNC13BO14795 1591 aa36.08■■■■□ 3.37
RCCD1-206ENST00000556618 KDM5DQ9BY66 1539 aa36.07■■■■□ 3.37
RCCD1-206ENST00000556618 SETD5Q9C0A6 1442 aa36.06■■■■□ 3.36
RCCD1-206ENST00000556618 KANK1Q14678 1352 aa36.05■■■■□ 3.36
RCCD1-206ENST00000556618 MROH2AA6NES4 1674 aa36.05■■■■□ 3.36
RCCD1-206ENST00000556618 PTPRMP28827 1452 aa36.04■■■■□ 3.36
RCCD1-206ENST00000556618 CEP152O94986 1710 aa36.04■■■■□ 3.36
RCCD1-206ENST00000556618 VWDEQ8N2E2 1590 aa36.04■■■■□ 3.36
RCCD1-206ENST00000556618 ZC3H13Q5T200 1668 aaKnown RBP36.04■■■■□ 3.36
RCCD1-206ENST00000556618 ABCC3O15438 1527 aa36.03■■■■□ 3.36
RCCD1-206ENST00000556618 ZMYM3Q14202 1370 aa35.99■■■■□ 3.35
RCCD1-206ENST00000556618 C3P01024 1663 aa35.98■■■■□ 3.35
RCCD1-206ENST00000556618 NUP155O75694 1391 aa35.96■■■■□ 3.35
RCCD1-206ENST00000556618 CEBPAP49715 358 aaPredicted RBP35.95■■■■□ 3.35
RCCD1-206ENST00000556618 LMTK2Q8IWU2 1503 aa35.95■■■■□ 3.34
RCCD1-206ENST00000556618 RAB3GAP2Q9H2M9 1393 aa35.94■■■■□ 3.34
RCCD1-206ENST00000556618 IQGAP3Q86VI3 1631 aa35.94■■■■□ 3.34
RCCD1-206ENST00000556618 CAMSAP1Q5T5Y3 1602 aa35.93■■■■□ 3.34
RCCD1-206ENST00000556618 PLPPR3Q6T4P5 718 aa35.93■■■■□ 3.34
RCCD1-206ENST00000556618 TRIM52Q96A61 297 aa35.9■■■■□ 3.34
RCCD1-206ENST00000556618 CFAP65Q6ZU64 1925 aaKnown RBP35.88■■■■□ 3.33
RCCD1-206ENST00000556618 TET3O43151 1660 aa35.87■■■■□ 3.33
RCCD1-206ENST00000556618 ACIN1Q9UKV3 1341 aaKnown RBP35.86■■■■□ 3.33
RCCD1-206ENST00000556618 PZPP20742 1482 aa35.85■■■■□ 3.33
RCCD1-206ENST00000556618 ARHGAP31Q2M1Z3 1444 aa35.85■■■■□ 3.33
RCCD1-206ENST00000556618 HRCP23327 699 aa35.85■■■■□ 3.33
RCCD1-206ENST00000556618 EFCAB6Q5THR3 1501 aa35.83■■■■□ 3.33
RCCD1-206ENST00000556618 SETD1BQ9UPS6 1966 aaKnown RBP35.82■■■■□ 3.33
RCCD1-206ENST00000556618 NPATQ14207 1427 aa35.8■■■■□ 3.32
RCCD1-206ENST00000556618 FBXO31Q5XUX0 539 aaPredicted RBP35.8■■■■□ 3.32
RCCD1-206ENST00000556618 AEBP2Q6ZN18 517 aaPredicted RBP35.78■■■■□ 3.32
RCCD1-206ENST00000556618 E9PCH4 1651 aa35.76■■■■□ 3.31
RCCD1-206ENST00000556618 PCGF6Q9BYE7 350 aa35.74■■■■□ 3.31
RCCD1-206ENST00000556618 PREX1Q8TCU6 1659 aa35.73■■■■□ 3.31
RCCD1-206ENST00000556618 SLC4A1APQ9BWU0 796 aaKnown RBP35.73■■■■□ 3.31
RCCD1-206ENST00000556618 RPRD2Q5VT52 1461 aaKnown RBP35.73■■■■□ 3.31
RCCD1-206ENST00000556618 SPATA31D1Q6ZQQ2 1576 aa35.71■■■■□ 3.31
RCCD1-206ENST00000556618 ERVK-7P63135 1459 aa35.71■■■■□ 3.31
RCCD1-206ENST00000556618 MPHOSPH9Q99550 1183 aa35.69■■■■□ 3.3
RCCD1-206ENST00000556618 PKD2Q13563 968 aa35.67■■■■□ 3.3
RCCD1-206ENST00000556618 TNRQ92752 1358 aa35.66■■■■□ 3.3
RCCD1-206ENST00000556618 NOS1P29475 1434 aa35.64■■■■□ 3.3
RCCD1-206ENST00000556618 MYO3AQ8NEV4 1616 aa35.59■■■■□ 3.29
RCCD1-206ENST00000556618 SYNMO15061 1565 aa35.58■■■■□ 3.29
RCCD1-206ENST00000556618 UHRF1BP1Q6BDS2 1440 aa35.57■■■■□ 3.28
RCCD1-206ENST00000556618 SPHKAPQ2M3C7 1700 aa35.57■■■■□ 3.28
RCCD1-206ENST00000556618 FOXD1Q16676 465 aa35.55■■■■□ 3.28
RCCD1-206ENST00000556618 PTPRTO14522 1441 aa35.54■■■■□ 3.28
RCCD1-206ENST00000556618 NLRP1Q9C000 1473 aa35.53■■■■□ 3.28
RCCD1-206ENST00000556618 ZNF142P52746 1687 aaPredicted RBP35.51■■■■□ 3.27
RCCD1-206ENST00000556618 LMTK3Q96Q04 1460 aa35.51■■■■□ 3.27
RCCD1-206ENST00000556618 CEP170BQ9Y4F5 1589 aaPredicted RBP35.49■■■■□ 3.27
RCCD1-206ENST00000556618 A2ML1A8K2U0 1454 aa35.48■■■■□ 3.27
RCCD1-206ENST00000556618 PLA2R1Q13018 1463 aa35.48■■■■□ 3.27
RCCD1-206ENST00000556618 IDI1Q13907 227 aa35.48■■■■□ 3.27
RCCD1-206ENST00000556618 SLC52A1Q9NWF4 448 aa35.48■■■■□ 3.27
RCCD1-206ENST00000556618 PIK3C2BO00750 1634 aa35.46■■■■□ 3.27
RCCD1-206ENST00000556618 TRPM2O94759 1503 aa35.46■■■■□ 3.27
RCCD1-206ENST00000556618 UGGT1Q9NYU2 1555 aa35.45■■■■□ 3.26
RCCD1-206ENST00000556618 UBR1Q8IWV7 1749 aa35.39■■■■□ 3.26
RCCD1-206ENST00000556618 CLTCL1P53675 1640 aa35.38■■■■□ 3.25
RCCD1-206ENST00000556618 HSPA2P54652 639 aa35.37■■■■□ 3.25
RCCD1-206ENST00000556618 KDM5AP29375 1690 aaKnown RBP35.36■■■■□ 3.25
RCCD1-206ENST00000556618 DHX57Q6P158 1386 aaKnown RBP35.35■■■■□ 3.25
RCCD1-206ENST00000556618 ANKRD30BQ9BXX2 1392 aa35.34■■■■□ 3.25
RCCD1-206ENST00000556618 THEMISQ8N1K5 641 aaPredicted RBP35.34■■■■□ 3.25
RCCD1-206ENST00000556618 STAG3Q9UJ98 1225 aa35.34■■■■□ 3.25
RCCD1-206ENST00000556618 MYO5BQ9ULV0 1848 aa35.33■■■■□ 3.25
RCCD1-206ENST00000556618 ADGRB3O60242 1522 aa35.32■■■■□ 3.25
RCCD1-206ENST00000556618 TMEM131LA2VDJ0 1609 aa35.32■■■■□ 3.24
RCCD1-206ENST00000556618 CCDC144AA2RUR9 1427 aa35.3■■■■□ 3.24
RCCD1-206ENST00000556618 KIF1BO60333 1816 aa35.3■■■■□ 3.24
RCCD1-206ENST00000556618 CHGAP10645 457 aaKnown RBP35.29■■■■□ 3.24
RCCD1-206ENST00000556618 SLIT1O75093 1534 aa35.19■■■■□ 3.22
RCCD1-206ENST00000556618 TMEM2Q9UHN6 1383 aa35.19■■■■□ 3.22
RCCD1-206ENST00000556618 ARHGAP23Q9P227 1491 aa35.18■■■■□ 3.22
RCCD1-206ENST00000556618 STRCQ7RTU9 1775 aa35.18■■■■□ 3.22
RCCD1-206ENST00000556618 ANKLE2Q86XL3 938 aa35.14■■■■□ 3.22
RCCD1-206ENST00000556618 SPATA31E1Q6ZUB1 1445 aa35.13■■■■□ 3.21
RCCD1-206ENST00000556618 ZNF326Q5BKZ1 582 aaKnown RBP35.13■■■■□ 3.21
RCCD1-206ENST00000556618 NCKAP5LQ9HCH0 1330 aa35.12■■■■□ 3.21
RCCD1-206ENST00000556618 POLR1AO95602 1720 aaPredicted RBP35.12■■■■□ 3.21
RCCD1-206ENST00000556618 LTKP29376 864 aa35.1■■■■□ 3.21
RCCD1-206ENST00000556618 TXNDC2Q86VQ3 553 aa35.1■■■■□ 3.21
RCCD1-206ENST00000556618 ZFYVE9O95405 1425 aa35.1■■■■□ 3.21
RCCD1-206ENST00000556618 RIMS2Q9UQ26 1411 aa35.1■■■■□ 3.21
RCCD1-206ENST00000556618 NEURL4Q96JN8 1562 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms