RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
FOXN3-212ENST00000556541 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
FOXN3-212ENST00000556541 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
FOXN3-212ENST00000556541 SIGLEC1Q9BZZ2 1709 aa16.9■□□□□ 0.3
FOXN3-212ENST00000556541 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
FOXN3-212ENST00000556541 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
FOXN3-212ENST00000556541 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
FOXN3-212ENST00000556541 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
FOXN3-212ENST00000556541 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
FOXN3-212ENST00000556541 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
FOXN3-212ENST00000556541 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
FOXN3-212ENST00000556541 LMTK2Q8IWU2 1503 aa16.83■□□□□ 0.28
FOXN3-212ENST00000556541 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
FOXN3-212ENST00000556541 MROH2AA6NES4 1674 aa16.8■□□□□ 0.28
FOXN3-212ENST00000556541 TET3O43151 1660 aa16.79■□□□□ 0.28
FOXN3-212ENST00000556541 KIF3BO15066 747 aa16.79■□□□□ 0.28
FOXN3-212ENST00000556541 ADAMTSL3P82987 1691 aa16.78■□□□□ 0.28
FOXN3-212ENST00000556541 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
FOXN3-212ENST00000556541 KANK1Q14678 1352 aa16.77■□□□□ 0.28
FOXN3-212ENST00000556541 ABCC3O15438 1527 aa16.76■□□□□ 0.27
FOXN3-212ENST00000556541 PZPP20742 1482 aa16.75■□□□□ 0.27
FOXN3-212ENST00000556541 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
FOXN3-212ENST00000556541 CEP152O94986 1710 aa16.75■□□□□ 0.27
FOXN3-212ENST00000556541 RPRD2Q5VT52 1461 aaKnown RBP16.74■□□□□ 0.27
FOXN3-212ENST00000556541 ARHGAP31Q2M1Z3 1444 aa16.74■□□□□ 0.27
FOXN3-212ENST00000556541 EFCAB6Q5THR3 1501 aa16.74■□□□□ 0.27
FOXN3-212ENST00000556541 NUP155O75694 1391 aa16.74■□□□□ 0.27
FOXN3-212ENST00000556541 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
FOXN3-212ENST00000556541 CLTCQ00610 1675 aaKnown RBP16.72■□□□□ 0.27
FOXN3-212ENST00000556541 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
FOXN3-212ENST00000556541 E9PCH4 1651 aa16.69■□□□□ 0.26
FOXN3-212ENST00000556541 GGT6Q6P531 493 aa16.69■□□□□ 0.26
FOXN3-212ENST00000556541 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
FOXN3-212ENST00000556541 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
FOXN3-212ENST00000556541 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
FOXN3-212ENST00000556541 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
FOXN3-212ENST00000556541 MPHOSPH9Q99550 1183 aa16.65■□□□□ 0.26
FOXN3-212ENST00000556541 C3P01024 1663 aa16.65■□□□□ 0.26
FOXN3-212ENST00000556541 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
FOXN3-212ENST00000556541 NPATQ14207 1427 aa16.64■□□□□ 0.25
FOXN3-212ENST00000556541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
FOXN3-212ENST00000556541 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
FOXN3-212ENST00000556541 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
FOXN3-212ENST00000556541 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
FOXN3-212ENST00000556541 PTPRTO14522 1441 aa16.63■□□□□ 0.25
FOXN3-212ENST00000556541 PREX1Q8TCU6 1659 aa16.63■□□□□ 0.25
FOXN3-212ENST00000556541 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
FOXN3-212ENST00000556541 NOS1P29475 1434 aa16.62■□□□□ 0.25
FOXN3-212ENST00000556541 ZMYM3Q14202 1370 aa16.62■□□□□ 0.25
FOXN3-212ENST00000556541 TRPM2O94759 1503 aa16.61■□□□□ 0.25
FOXN3-212ENST00000556541 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
FOXN3-212ENST00000556541 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
FOXN3-212ENST00000556541 MLECQ14165 292 aa16.59■□□□□ 0.25
FOXN3-212ENST00000556541 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
FOXN3-212ENST00000556541 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
FOXN3-212ENST00000556541 PKD2Q13563 968 aa16.58■□□□□ 0.24
FOXN3-212ENST00000556541 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
FOXN3-212ENST00000556541 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
FOXN3-212ENST00000556541 ANKRD30BQ9BXX2 1392 aa16.57■□□□□ 0.24
FOXN3-212ENST00000556541 PTPRMP28827 1452 aa16.56■□□□□ 0.24
FOXN3-212ENST00000556541 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
FOXN3-212ENST00000556541 SYNMO15061 1565 aa16.55■□□□□ 0.24
FOXN3-212ENST00000556541 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
FOXN3-212ENST00000556541 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
FOXN3-212ENST00000556541 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
FOXN3-212ENST00000556541 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
FOXN3-212ENST00000556541 KIF1BO60333 1816 aa16.51■□□□□ 0.23
FOXN3-212ENST00000556541 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
FOXN3-212ENST00000556541 TNRQ92752 1358 aa16.5■□□□□ 0.23
FOXN3-212ENST00000556541 MYO3AQ8NEV4 1616 aa16.49■□□□□ 0.23
FOXN3-212ENST00000556541 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
FOXN3-212ENST00000556541 ADGRB3O60242 1522 aa16.46■□□□□ 0.23
FOXN3-212ENST00000556541 TMEM131LA2VDJ0 1609 aa16.45■□□□□ 0.22
FOXN3-212ENST00000556541 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
FOXN3-212ENST00000556541 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
FOXN3-212ENST00000556541 A2ML1A8K2U0 1454 aa16.44■□□□□ 0.22
FOXN3-212ENST00000556541 FOXD1Q16676 465 aa16.44■□□□□ 0.22
FOXN3-212ENST00000556541 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
FOXN3-212ENST00000556541 SPATA31E1Q6ZUB1 1445 aa16.44■□□□□ 0.22
FOXN3-212ENST00000556541 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
FOXN3-212ENST00000556541 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
FOXN3-212ENST00000556541 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
FOXN3-212ENST00000556541 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
FOXN3-212ENST00000556541 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
FOXN3-212ENST00000556541 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
FOXN3-212ENST00000556541 MYO5BQ9ULV0 1848 aa16.4■□□□□ 0.22
FOXN3-212ENST00000556541 IDI1Q13907 227 aa16.4■□□□□ 0.22
FOXN3-212ENST00000556541 UHRF1BP1Q6BDS2 1440 aa16.39■□□□□ 0.21
FOXN3-212ENST00000556541 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
FOXN3-212ENST00000556541 SLIT1O75093 1534 aa16.38■□□□□ 0.21
FOXN3-212ENST00000556541 PPLO60437 1756 aa16.38■□□□□ 0.21
FOXN3-212ENST00000556541 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
FOXN3-212ENST00000556541 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
FOXN3-212ENST00000556541 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
FOXN3-212ENST00000556541 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
FOXN3-212ENST00000556541 MYOM2P54296 1465 aa16.34■□□□□ 0.21
FOXN3-212ENST00000556541 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
FOXN3-212ENST00000556541 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
FOXN3-212ENST00000556541 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
FOXN3-212ENST00000556541 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms