RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ERBINQ96RT1 1412 aa26.14■■□□□ 1.77
TUBB3-211ENST00000556536 KIF3BO15066 747 aa26.1■■□□□ 1.77
TUBB3-211ENST00000556536 AGLP35573 1532 aa26.09■■□□□ 1.77
TUBB3-211ENST00000556536 SETD5Q9C0A6 1442 aa26.09■■□□□ 1.77
TUBB3-211ENST00000556536 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
TUBB3-211ENST00000556536 MLECQ14165 292 aa26.04■■□□□ 1.76
TUBB3-211ENST00000556536 RAB3GAP2Q9H2M9 1393 aa26.04■■□□□ 1.76
TUBB3-211ENST00000556536 EIF2AK4Q9P2K8 1649 aaKnown RBP26.03■■□□□ 1.76
TUBB3-211ENST00000556536 HSPA2P54652 639 aa26.03■■□□□ 1.76
TUBB3-211ENST00000556536 GGT6Q6P531 493 aa26.02■■□□□ 1.76
TUBB3-211ENST00000556536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.99■■□□□ 1.75
TUBB3-211ENST00000556536 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
TUBB3-211ENST00000556536 RNF17Q9BXT8 1623 aaKnown RBP25.97■■□□□ 1.75
TUBB3-211ENST00000556536 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
TUBB3-211ENST00000556536 CERKQ8TCT0 537 aa25.95■■□□□ 1.74
TUBB3-211ENST00000556536 DEPDC5O75140 1603 aa25.93■■□□□ 1.74
TUBB3-211ENST00000556536 FER1L4A9Z1Z3 1794 aa25.93■■□□□ 1.74
TUBB3-211ENST00000556536 UNC13BO14795 1591 aa25.92■■□□□ 1.74
TUBB3-211ENST00000556536 HRCP23327 699 aa25.92■■□□□ 1.74
TUBB3-211ENST00000556536 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
TUBB3-211ENST00000556536 PRDM15P57071 1507 aaPredicted RBP25.92■■□□□ 1.74
TUBB3-211ENST00000556536 NUP155O75694 1391 aa25.92■■□□□ 1.74
TUBB3-211ENST00000556536 KANK1Q14678 1352 aa25.88■■□□□ 1.73
TUBB3-211ENST00000556536 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
TUBB3-211ENST00000556536 WASHC2CQ9Y4E1 1318 aa25.88■■□□□ 1.73
TUBB3-211ENST00000556536 VWDEQ8N2E2 1590 aa25.87■■□□□ 1.73
TUBB3-211ENST00000556536 ABCC3O15438 1527 aa25.85■■□□□ 1.73
TUBB3-211ENST00000556536 KDM5DQ9BY66 1539 aa25.85■■□□□ 1.73
TUBB3-211ENST00000556536 PREX1Q8TCU6 1659 aa25.83■■□□□ 1.73
TUBB3-211ENST00000556536 ESF1Q9H501 851 aaKnown RBP25.83■■□□□ 1.73
TUBB3-211ENST00000556536 PZPP20742 1482 aa25.83■■□□□ 1.73
TUBB3-211ENST00000556536 FAM135AQ9P2D6 1515 aa25.82■■□□□ 1.72
TUBB3-211ENST00000556536 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
TUBB3-211ENST00000556536 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
TUBB3-211ENST00000556536 LMTK2Q8IWU2 1503 aa25.8■■□□□ 1.72
TUBB3-211ENST00000556536 MPHOSPH9Q99550 1183 aa25.78■■□□□ 1.72
TUBB3-211ENST00000556536 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
TUBB3-211ENST00000556536 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
TUBB3-211ENST00000556536 CLTCQ00610 1675 aaKnown RBP25.77■■□□□ 1.72
TUBB3-211ENST00000556536 CEP152O94986 1710 aa25.77■■□□□ 1.72
TUBB3-211ENST00000556536 DMRT2Q9Y5R5 561 aa25.76■■□□□ 1.71
TUBB3-211ENST00000556536 ZMYM3Q14202 1370 aa25.76■■□□□ 1.71
TUBB3-211ENST00000556536 ZC3H13Q5T200 1668 aaKnown RBP25.75■■□□□ 1.71
TUBB3-211ENST00000556536 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
TUBB3-211ENST00000556536 PKD2Q13563 968 aa25.73■■□□□ 1.71
TUBB3-211ENST00000556536 EFCAB6Q5THR3 1501 aa25.73■■□□□ 1.71
TUBB3-211ENST00000556536 CAMSAP1Q5T5Y3 1602 aa25.72■■□□□ 1.71
TUBB3-211ENST00000556536 TET3O43151 1660 aa25.71■■□□□ 1.71
TUBB3-211ENST00000556536 NPATQ14207 1427 aa25.71■■□□□ 1.71
TUBB3-211ENST00000556536 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
TUBB3-211ENST00000556536 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
TUBB3-211ENST00000556536 FOXD1Q16676 465 aa25.7■■□□□ 1.7
TUBB3-211ENST00000556536 STRCQ7RTU9 1775 aa25.69■■□□□ 1.7
TUBB3-211ENST00000556536 FBXO31Q5XUX0 539 aaPredicted RBP25.68■■□□□ 1.7
TUBB3-211ENST00000556536 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
TUBB3-211ENST00000556536 MROH2AA6NES4 1674 aa25.68■■□□□ 1.7
TUBB3-211ENST00000556536 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
TUBB3-211ENST00000556536 E9PCH4 1651 aa25.64■■□□□ 1.7
TUBB3-211ENST00000556536 RPRD2Q5VT52 1461 aaKnown RBP25.63■■□□□ 1.69
TUBB3-211ENST00000556536 C3P01024 1663 aa25.63■■□□□ 1.69
TUBB3-211ENST00000556536 SETD1BQ9UPS6 1966 aaKnown RBP25.63■■□□□ 1.69
TUBB3-211ENST00000556536 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
TUBB3-211ENST00000556536 ILDR2Q71H61 639 aa25.6■■□□□ 1.69
TUBB3-211ENST00000556536 PTPRTO14522 1441 aa25.6■■□□□ 1.69
TUBB3-211ENST00000556536 NOS1P29475 1434 aa25.59■■□□□ 1.69
TUBB3-211ENST00000556536 PLA2R1Q13018 1463 aa25.59■■□□□ 1.69
TUBB3-211ENST00000556536 SOCS7O14512 581 aa25.58■■□□□ 1.69
TUBB3-211ENST00000556536 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
TUBB3-211ENST00000556536 TNRQ92752 1358 aa25.55■■□□□ 1.68
TUBB3-211ENST00000556536 ANKRD30BQ9BXX2 1392 aa25.54■■□□□ 1.68
TUBB3-211ENST00000556536 SYNMO15061 1565 aa25.52■■□□□ 1.68
TUBB3-211ENST00000556536 TRPM2O94759 1503 aa25.5■■□□□ 1.67
TUBB3-211ENST00000556536 UGGT1Q9NYU2 1555 aa25.49■■□□□ 1.67
TUBB3-211ENST00000556536 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
TUBB3-211ENST00000556536 SPHKAPQ2M3C7 1700 aa25.49■■□□□ 1.67
TUBB3-211ENST00000556536 CFAP65Q6ZU64 1925 aaKnown RBP25.48■■□□□ 1.67
TUBB3-211ENST00000556536 LTBP4Q8N2S1 1624 aa25.48■■□□□ 1.67
TUBB3-211ENST00000556536 IDI1Q13907 227 aa25.47■■□□□ 1.67
TUBB3-211ENST00000556536 CCER1Q8TC90 406 aaPredicted RBP25.47■■□□□ 1.67
TUBB3-211ENST00000556536 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
TUBB3-211ENST00000556536 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
TUBB3-211ENST00000556536 CLTCL1P53675 1640 aa25.42■■□□□ 1.66
TUBB3-211ENST00000556536 SIN3AQ96ST3 1273 aa25.42■■□□□ 1.66
TUBB3-211ENST00000556536 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
TUBB3-211ENST00000556536 NLRP1Q9C000 1473 aa25.41■■□□□ 1.66
TUBB3-211ENST00000556536 MYO3AQ8NEV4 1616 aa25.39■■□□□ 1.66
TUBB3-211ENST00000556536 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
TUBB3-211ENST00000556536 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
TUBB3-211ENST00000556536 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
TUBB3-211ENST00000556536 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
TUBB3-211ENST00000556536 STAG3Q9UJ98 1225 aa25.33■■□□□ 1.65
TUBB3-211ENST00000556536 CEP170BQ9Y4F5 1589 aaPredicted RBP25.33■■□□□ 1.65
TUBB3-211ENST00000556536 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
TUBB3-211ENST00000556536 SPATA31E1Q6ZUB1 1445 aa25.31■■□□□ 1.64
TUBB3-211ENST00000556536 TMEM131LA2VDJ0 1609 aa25.3■■□□□ 1.64
TUBB3-211ENST00000556536 RGL3Q3MIN7 710 aa25.29■■□□□ 1.64
TUBB3-211ENST00000556536 ZNF142P52746 1687 aaPredicted RBP25.28■■□□□ 1.64
TUBB3-211ENST00000556536 UBR1Q8IWV7 1749 aa25.26■■□□□ 1.63
TUBB3-211ENST00000556536 ZNF326Q5BKZ1 582 aaKnown RBP25.26■■□□□ 1.63
TUBB3-211ENST00000556536 THEMISQ8N1K5 641 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms