RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
LINC00520-204ENST00000556417 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
LINC00520-204ENST00000556417 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
LINC00520-204ENST00000556417 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
LINC00520-204ENST00000556417 A2ML1A8K2U0 1454 aa14.22□□□□□ -0.13
LINC00520-204ENST00000556417 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
LINC00520-204ENST00000556417 TSPY4P0CV99 314 aa14.21□□□□□ -0.13
LINC00520-204ENST00000556417 TSPY10P0CW01 314 aa14.21□□□□□ -0.13
LINC00520-204ENST00000556417 UBAP1LF5GYI3 381 aa14.2□□□□□ -0.14
LINC00520-204ENST00000556417 TNRQ92752 1358 aa14.2□□□□□ -0.14
LINC00520-204ENST00000556417 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
LINC00520-204ENST00000556417 PZPP20742 1482 aa14.19□□□□□ -0.14
LINC00520-204ENST00000556417 KDM5DQ9BY66 1539 aa14.18□□□□□ -0.14
LINC00520-204ENST00000556417 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
LINC00520-204ENST00000556417 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
LINC00520-204ENST00000556417 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
LINC00520-204ENST00000556417 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
LINC00520-204ENST00000556417 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
LINC00520-204ENST00000556417 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
LINC00520-204ENST00000556417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00520-204ENST00000556417 SOCS7O14512 581 aa14.15□□□□□ -0.14
LINC00520-204ENST00000556417 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
LINC00520-204ENST00000556417 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
LINC00520-204ENST00000556417 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
LINC00520-204ENST00000556417 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
LINC00520-204ENST00000556417 SPATA31D1Q6ZQQ2 1576 aa14.12□□□□□ -0.15
LINC00520-204ENST00000556417 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
LINC00520-204ENST00000556417 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
LINC00520-204ENST00000556417 UGGT1Q9NYU2 1555 aa14.1□□□□□ -0.15
LINC00520-204ENST00000556417 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
LINC00520-204ENST00000556417 MYOM3Q5VTT5 1437 aa14.09□□□□□ -0.15
LINC00520-204ENST00000556417 MED14O60244 1454 aa14.09□□□□□ -0.15
LINC00520-204ENST00000556417 ABCC3O15438 1527 aa14.09□□□□□ -0.15
LINC00520-204ENST00000556417 CPS1P31327 1500 aa14.09□□□□□ -0.15
LINC00520-204ENST00000556417 NPHP4O75161 1426 aaPredicted RBP14.08□□□□□ -0.15
LINC00520-204ENST00000556417 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
LINC00520-204ENST00000556417 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.16
LINC00520-204ENST00000556417 TOM1O60784 492 aa14.07□□□□□ -0.16
LINC00520-204ENST00000556417 HSPA1LP34931 641 aa14.07□□□□□ -0.16
LINC00520-204ENST00000556417 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
LINC00520-204ENST00000556417 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
LINC00520-204ENST00000556417 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
LINC00520-204ENST00000556417 MROH1Q8NDA8 1641 aa14.05□□□□□ -0.16
LINC00520-204ENST00000556417 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
LINC00520-204ENST00000556417 ERVK-7P63135 1459 aa14.05□□□□□ -0.16
LINC00520-204ENST00000556417 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
LINC00520-204ENST00000556417 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
LINC00520-204ENST00000556417 ABCC5O15440 1437 aa14.04□□□□□ -0.16
LINC00520-204ENST00000556417 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
LINC00520-204ENST00000556417 ZC3H13Q5T200 1668 aaKnown RBP14.03□□□□□ -0.16
LINC00520-204ENST00000556417 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
LINC00520-204ENST00000556417 LTKP29376 864 aa14.01□□□□□ -0.17
LINC00520-204ENST00000556417 ARHGAP31Q2M1Z3 1444 aa14□□□□□ -0.17
LINC00520-204ENST00000556417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
LINC00520-204ENST00000556417 ALKQ9UM73 1620 aa14□□□□□ -0.17
LINC00520-204ENST00000556417 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
LINC00520-204ENST00000556417 IQGAP1P46940 1657 aa13.99□□□□□ -0.17
LINC00520-204ENST00000556417 APLP2Q06481 763 aa13.99□□□□□ -0.17
LINC00520-204ENST00000556417 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
LINC00520-204ENST00000556417 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
LINC00520-204ENST00000556417 PRDM15P57071 1507 aaPredicted RBP13.98□□□□□ -0.17
LINC00520-204ENST00000556417 DAPK1P53355 1430 aa13.98□□□□□ -0.17
LINC00520-204ENST00000556417 CEP152O94986 1710 aa13.97□□□□□ -0.17
LINC00520-204ENST00000556417 SCAF11Q99590 1463 aaKnown RBP13.97□□□□□ -0.17
LINC00520-204ENST00000556417 ARHGAP23Q9P227 1491 aa13.97□□□□□ -0.17
LINC00520-204ENST00000556417 PTPN23Q9H3S7 1636 aa13.97□□□□□ -0.17
LINC00520-204ENST00000556417 SLIT1O75093 1534 aa13.96□□□□□ -0.17
LINC00520-204ENST00000556417 UBR1Q8IWV7 1749 aa13.96□□□□□ -0.17
LINC00520-204ENST00000556417 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
LINC00520-204ENST00000556417 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
LINC00520-204ENST00000556417 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.18
LINC00520-204ENST00000556417 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.18
LINC00520-204ENST00000556417 IDI1Q13907 227 aa13.94□□□□□ -0.18
LINC00520-204ENST00000556417 EID1Q9Y6B2 187 aa13.94□□□□□ -0.18
LINC00520-204ENST00000556417 KANK1Q14678 1352 aa13.94□□□□□ -0.18
LINC00520-204ENST00000556417 TMEM2Q9UHN6 1383 aa13.94□□□□□ -0.18
LINC00520-204ENST00000556417 MED1Q15648 1581 aaPredicted RBP13.93□□□□□ -0.18
LINC00520-204ENST00000556417 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
LINC00520-204ENST00000556417 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
LINC00520-204ENST00000556417 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
LINC00520-204ENST00000556417 LMTK2Q8IWU2 1503 aa13.91□□□□□ -0.18
LINC00520-204ENST00000556417 SYNMO15061 1565 aa13.9□□□□□ -0.18
LINC00520-204ENST00000556417 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
LINC00520-204ENST00000556417 PIK3C2BO00750 1634 aa13.9□□□□□ -0.19
LINC00520-204ENST00000556417 NOS1P29475 1434 aa13.89□□□□□ -0.19
LINC00520-204ENST00000556417 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
LINC00520-204ENST00000556417 SLC26A8Q96RN1 970 aa13.87□□□□□ -0.19
LINC00520-204ENST00000556417 SLC52A1Q9NWF4 448 aa13.87□□□□□ -0.19
LINC00520-204ENST00000556417 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
LINC00520-204ENST00000556417 KCNA6P17658 529 aa13.86□□□□□ -0.19
LINC00520-204ENST00000556417 FAM50AQ14320 339 aaKnown RBP13.86□□□□□ -0.19
LINC00520-204ENST00000556417 TET3O43151 1660 aa13.85□□□□□ -0.19
LINC00520-204ENST00000556417 TMEM94Q12767 1356 aa13.85□□□□□ -0.19
LINC00520-204ENST00000556417 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
LINC00520-204ENST00000556417 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
LINC00520-204ENST00000556417 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
LINC00520-204ENST00000556417 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
LINC00520-204ENST00000556417 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
LINC00520-204ENST00000556417 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
LINC00520-204ENST00000556417 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms