RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 KIF3BO15066 747 aa17.82■□□□□ 0.44
SLIRP-206ENST00000556375 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
SLIRP-206ENST00000556375 NPATQ14207 1427 aa17.81■□□□□ 0.44
SLIRP-206ENST00000556375 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
SLIRP-206ENST00000556375 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
SLIRP-206ENST00000556375 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
SLIRP-206ENST00000556375 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
SLIRP-206ENST00000556375 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
SLIRP-206ENST00000556375 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
SLIRP-206ENST00000556375 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
SLIRP-206ENST00000556375 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
SLIRP-206ENST00000556375 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
SLIRP-206ENST00000556375 ABCC3O15438 1527 aa17.77■□□□□ 0.43
SLIRP-206ENST00000556375 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
SLIRP-206ENST00000556375 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
SLIRP-206ENST00000556375 ZNF142P52746 1687 aaPredicted RBP17.76■□□□□ 0.43
SLIRP-206ENST00000556375 CEP152O94986 1710 aa17.75■□□□□ 0.43
SLIRP-206ENST00000556375 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
SLIRP-206ENST00000556375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
SLIRP-206ENST00000556375 PZPP20742 1482 aa17.75■□□□□ 0.43
SLIRP-206ENST00000556375 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
SLIRP-206ENST00000556375 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SLIRP-206ENST00000556375 WASHC2CQ9Y4E1 1318 aa17.72■□□□□ 0.43
SLIRP-206ENST00000556375 HSPA2P54652 639 aa17.72■□□□□ 0.43
SLIRP-206ENST00000556375 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
SLIRP-206ENST00000556375 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
SLIRP-206ENST00000556375 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-206ENST00000556375 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
SLIRP-206ENST00000556375 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
SLIRP-206ENST00000556375 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
SLIRP-206ENST00000556375 SPATA31D1Q6ZQQ2 1576 aa17.66■□□□□ 0.42
SLIRP-206ENST00000556375 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
SLIRP-206ENST00000556375 TNRQ92752 1358 aa17.66■□□□□ 0.42
SLIRP-206ENST00000556375 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
SLIRP-206ENST00000556375 UNC13BO14795 1591 aa17.65■□□□□ 0.42
SLIRP-206ENST00000556375 A2ML1A8K2U0 1454 aa17.64■□□□□ 0.41
SLIRP-206ENST00000556375 KANK1Q14678 1352 aa17.64■□□□□ 0.41
SLIRP-206ENST00000556375 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
SLIRP-206ENST00000556375 ARHGAP31Q2M1Z3 1444 aa17.63■□□□□ 0.41
SLIRP-206ENST00000556375 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
SLIRP-206ENST00000556375 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
SLIRP-206ENST00000556375 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
SLIRP-206ENST00000556375 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
SLIRP-206ENST00000556375 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
SLIRP-206ENST00000556375 GCC2Q8IWJ2 1684 aa17.59■□□□□ 0.41
SLIRP-206ENST00000556375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.417e-10■■■■□ 20.3
SLIRP-206ENST00000556375 TET3O43151 1660 aa17.58■□□□□ 0.41
SLIRP-206ENST00000556375 ITGAEP38570 1179 aa17.58■□□□□ 0.4
SLIRP-206ENST00000556375 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
SLIRP-206ENST00000556375 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
SLIRP-206ENST00000556375 UGGT1Q9NYU2 1555 aa17.56■□□□□ 0.4
SLIRP-206ENST00000556375 PTPRTO14522 1441 aa17.55■□□□□ 0.4
SLIRP-206ENST00000556375 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
SLIRP-206ENST00000556375 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
SLIRP-206ENST00000556375 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
SLIRP-206ENST00000556375 SYNMO15061 1565 aa17.52■□□□□ 0.39
SLIRP-206ENST00000556375 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
SLIRP-206ENST00000556375 NOS1P29475 1434 aa17.5■□□□□ 0.39
SLIRP-206ENST00000556375 NAIPQ13075 1403 aa17.5■□□□□ 0.39
SLIRP-206ENST00000556375 E9PCH4 1651 aa17.5■□□□□ 0.39
SLIRP-206ENST00000556375 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
SLIRP-206ENST00000556375 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
SLIRP-206ENST00000556375 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
SLIRP-206ENST00000556375 PKD2Q13563 968 aa17.49■□□□□ 0.39
SLIRP-206ENST00000556375 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
SLIRP-206ENST00000556375 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
SLIRP-206ENST00000556375 NUP155O75694 1391 aa17.45■□□□□ 0.38
SLIRP-206ENST00000556375 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
SLIRP-206ENST00000556375 SLIT1O75093 1534 aa17.43■□□□□ 0.38
SLIRP-206ENST00000556375 MED14O60244 1454 aa17.43■□□□□ 0.38
SLIRP-206ENST00000556375 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
SLIRP-206ENST00000556375 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
SLIRP-206ENST00000556375 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
SLIRP-206ENST00000556375 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
SLIRP-206ENST00000556375 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
SLIRP-206ENST00000556375 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
SLIRP-206ENST00000556375 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
SLIRP-206ENST00000556375 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
SLIRP-206ENST00000556375 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
SLIRP-206ENST00000556375 IDI1Q13907 227 aa17.38■□□□□ 0.37
SLIRP-206ENST00000556375 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
SLIRP-206ENST00000556375 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
SLIRP-206ENST00000556375 CERKQ8TCT0 537 aa17.35■□□□□ 0.37
SLIRP-206ENST00000556375 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
SLIRP-206ENST00000556375 IQSEC2Q5JU85 1478 aa17.33■□□□□ 0.37
SLIRP-206ENST00000556375 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.36
SLIRP-206ENST00000556375 TRPM2O94759 1503 aa17.32■□□□□ 0.36
SLIRP-206ENST00000556375 ILDR1Q86SU0 546 aaPredicted RBP17.32■□□□□ 0.36
SLIRP-206ENST00000556375 FBXO41Q8TF61 875 aa17.32■□□□□ 0.36
SLIRP-206ENST00000556375 LTKP29376 864 aa17.3■□□□□ 0.36
SLIRP-206ENST00000556375 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
SLIRP-206ENST00000556375 CPS1P31327 1500 aa17.3■□□□□ 0.36
SLIRP-206ENST00000556375 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SLIRP-206ENST00000556375 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
SLIRP-206ENST00000556375 TXNDC2Q86VQ3 553 aa17.29■□□□□ 0.36
SLIRP-206ENST00000556375 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
SLIRP-206ENST00000556375 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.35
SLIRP-206ENST00000556375 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
SLIRP-206ENST00000556375 KIF1BO60333 1816 aa17.26■□□□□ 0.35
SLIRP-206ENST00000556375 RIMS2Q9UQ26 1411 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms