RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
ACTN1-217ENST00000556203 MROH2AA6NES4 1674 aa23.27■■□□□ 1.32
ACTN1-217ENST00000556203 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
ACTN1-217ENST00000556203 ADGRL2O95490 1459 aa23.26■■□□□ 1.31
ACTN1-217ENST00000556203 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
ACTN1-217ENST00000556203 PTPRKQ15262 1439 aa23.25■■□□□ 1.31
ACTN1-217ENST00000556203 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
ACTN1-217ENST00000556203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
ACTN1-217ENST00000556203 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
ACTN1-217ENST00000556203 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
ACTN1-217ENST00000556203 ITGAEP38570 1179 aa23.23■■□□□ 1.31
ACTN1-217ENST00000556203 HSPA2P54652 639 aa23.23■■□□□ 1.31
ACTN1-217ENST00000556203 NPATQ14207 1427 aa23.23■■□□□ 1.31
ACTN1-217ENST00000556203 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
ACTN1-217ENST00000556203 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
ACTN1-217ENST00000556203 PREX1Q8TCU6 1659 aa23.19■■□□□ 1.3
ACTN1-217ENST00000556203 MROH1Q8NDA8 1641 aa23.19■■□□□ 1.3
ACTN1-217ENST00000556203 ABCC3O15438 1527 aa23.18■■□□□ 1.3
ACTN1-217ENST00000556203 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
ACTN1-217ENST00000556203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.3
ACTN1-217ENST00000556203 ANKRD50Q9ULJ7 1429 aa23.16■■□□□ 1.3
ACTN1-217ENST00000556203 PZPP20742 1482 aa23.16■■□□□ 1.3
ACTN1-217ENST00000556203 FBXO31Q5XUX0 539 aaPredicted RBP23.15■■□□□ 1.3
ACTN1-217ENST00000556203 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.3
ACTN1-217ENST00000556203 SETD1BQ9UPS6 1966 aaKnown RBP23.14■■□□□ 1.29
ACTN1-217ENST00000556203 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
ACTN1-217ENST00000556203 KANK1Q14678 1352 aa23.11■■□□□ 1.29
ACTN1-217ENST00000556203 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
ACTN1-217ENST00000556203 TNRQ92752 1358 aa23.1■■□□□ 1.29
ACTN1-217ENST00000556203 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
ACTN1-217ENST00000556203 CEP152O94986 1710 aa23.06■■□□□ 1.28
ACTN1-217ENST00000556203 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
ACTN1-217ENST00000556203 VWDEQ8N2E2 1590 aa23.04■■□□□ 1.28
ACTN1-217ENST00000556203 ARHGAP31Q2M1Z3 1444 aa23.03■■□□□ 1.28
ACTN1-217ENST00000556203 ERVK-7P63135 1459 aa23.03■■□□□ 1.28
ACTN1-217ENST00000556203 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
ACTN1-217ENST00000556203 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
ACTN1-217ENST00000556203 A2ML1A8K2U0 1454 aa23.01■■□□□ 1.27
ACTN1-217ENST00000556203 SPATA31D1Q6ZQQ2 1576 aa23.01■■□□□ 1.27
ACTN1-217ENST00000556203 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
ACTN1-217ENST00000556203 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
ACTN1-217ENST00000556203 UNC13BO14795 1591 aa22.97■■□□□ 1.27
ACTN1-217ENST00000556203 NAIPQ13075 1403 aa22.95■■□□□ 1.26
ACTN1-217ENST00000556203 EFCAB6Q5THR3 1501 aa22.94■■□□□ 1.26
ACTN1-217ENST00000556203 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
ACTN1-217ENST00000556203 STRCQ7RTU9 1775 aa22.94■■□□□ 1.26
ACTN1-217ENST00000556203 PLA2R1Q13018 1463 aa22.93■■□□□ 1.26
ACTN1-217ENST00000556203 NUP155O75694 1391 aa22.93■■□□□ 1.26
ACTN1-217ENST00000556203 NCKAP5LQ9HCH0 1330 aa22.92■■□□□ 1.26
ACTN1-217ENST00000556203 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
ACTN1-217ENST00000556203 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
ACTN1-217ENST00000556203 PKD2Q13563 968 aa22.89■■□□□ 1.25
ACTN1-217ENST00000556203 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
ACTN1-217ENST00000556203 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
ACTN1-217ENST00000556203 PTPRTO14522 1441 aa22.88■■□□□ 1.25
ACTN1-217ENST00000556203 NOS1P29475 1434 aa22.88■■□□□ 1.25
ACTN1-217ENST00000556203 TET3O43151 1660 aa22.87■■□□□ 1.25
ACTN1-217ENST00000556203 CFAP65Q6ZU64 1925 aaKnown RBP22.87■■□□□ 1.25
ACTN1-217ENST00000556203 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
ACTN1-217ENST00000556203 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
ACTN1-217ENST00000556203 IDI1Q13907 227 aa22.83■■□□□ 1.25
ACTN1-217ENST00000556203 SYNMO15061 1565 aa22.83■■□□□ 1.25
ACTN1-217ENST00000556203 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
ACTN1-217ENST00000556203 STAG3Q9UJ98 1225 aa22.81■■□□□ 1.24
ACTN1-217ENST00000556203 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
ACTN1-217ENST00000556203 SLC52A1Q9NWF4 448 aa22.8■■□□□ 1.24
ACTN1-217ENST00000556203 E9PCH4 1651 aa22.78■■□□□ 1.24
ACTN1-217ENST00000556203 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
ACTN1-217ENST00000556203 UBR1Q8IWV7 1749 aa22.77■■□□□ 1.24
ACTN1-217ENST00000556203 NEURL4Q96JN8 1562 aa22.75■■□□□ 1.23
ACTN1-217ENST00000556203 TMEM2Q9UHN6 1383 aa22.73■■□□□ 1.23
ACTN1-217ENST00000556203 NPHP4O75161 1426 aaPredicted RBP22.73■■□□□ 1.23
ACTN1-217ENST00000556203 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
ACTN1-217ENST00000556203 ADGRB3O60242 1522 aa22.72■■□□□ 1.23
ACTN1-217ENST00000556203 SLIT1O75093 1534 aa22.72■■□□□ 1.23
ACTN1-217ENST00000556203 POLR1AO95602 1720 aaPredicted RBP22.72■■□□□ 1.23
ACTN1-217ENST00000556203 TXNDC2Q86VQ3 553 aa22.72■■□□□ 1.23
ACTN1-217ENST00000556203 LTKP29376 864 aa22.71■■□□□ 1.23
ACTN1-217ENST00000556203 MED14O60244 1454 aa22.71■■□□□ 1.23
ACTN1-217ENST00000556203 SCAF11Q99590 1463 aaKnown RBP22.71■■□□□ 1.23
ACTN1-217ENST00000556203 CERKQ8TCT0 537 aa22.7■■□□□ 1.22
ACTN1-217ENST00000556203 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
ACTN1-217ENST00000556203 EID1Q9Y6B2 187 aa22.7■■□□□ 1.22
ACTN1-217ENST00000556203 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
ACTN1-217ENST00000556203 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
ACTN1-217ENST00000556203 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
ACTN1-217ENST00000556203 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
ACTN1-217ENST00000556203 LTBP4Q8N2S1 1624 aa22.65■■□□□ 1.22
ACTN1-217ENST00000556203 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
ACTN1-217ENST00000556203 TMEM131LA2VDJ0 1609 aa22.63■■□□□ 1.21
ACTN1-217ENST00000556203 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
ACTN1-217ENST00000556203 ILDR1Q86SU0 546 aaPredicted RBP22.62■■□□□ 1.21
ACTN1-217ENST00000556203 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
ACTN1-217ENST00000556203 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
ACTN1-217ENST00000556203 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
ACTN1-217ENST00000556203 RIMS2Q9UQ26 1411 aa22.6■■□□□ 1.21
ACTN1-217ENST00000556203 FOXD1Q16676 465 aa22.6■■□□□ 1.21
ACTN1-217ENST00000556203 FBXO41Q8TF61 875 aa22.6■■□□□ 1.21
ACTN1-217ENST00000556203 TRPM2O94759 1503 aa22.6■■□□□ 1.21
ACTN1-217ENST00000556203 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms