RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
CHGA-205ENST00000556098 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
CHGA-205ENST00000556098 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
CHGA-205ENST00000556098 HSPA1LP34931 641 aa17.35■□□□□ 0.37
CHGA-205ENST00000556098 EHBP1L1Q8N3D4 1523 aa17.34■□□□□ 0.37
CHGA-205ENST00000556098 CPS1P31327 1500 aa17.33■□□□□ 0.37
CHGA-205ENST00000556098 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.37
CHGA-205ENST00000556098 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
CHGA-205ENST00000556098 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
CHGA-205ENST00000556098 TNRQ92752 1358 aa17.32■□□□□ 0.36
CHGA-205ENST00000556098 TOM1O60784 492 aa17.32■□□□□ 0.36
CHGA-205ENST00000556098 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
CHGA-205ENST00000556098 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
CHGA-205ENST00000556098 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
CHGA-205ENST00000556098 KIF3BO15066 747 aa17.31■□□□□ 0.36
CHGA-205ENST00000556098 CEP152O94986 1710 aa17.3■□□□□ 0.36
CHGA-205ENST00000556098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHGA-205ENST00000556098 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
CHGA-205ENST00000556098 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
CHGA-205ENST00000556098 PZPP20742 1482 aa17.27■□□□□ 0.36
CHGA-205ENST00000556098 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.36
CHGA-205ENST00000556098 WASHC2CQ9Y4E1 1318 aa17.26■□□□□ 0.35
CHGA-205ENST00000556098 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
CHGA-205ENST00000556098 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
CHGA-205ENST00000556098 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
CHGA-205ENST00000556098 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
CHGA-205ENST00000556098 ANKLE2Q86XL3 938 aa17.25■□□□□ 0.35
CHGA-205ENST00000556098 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
CHGA-205ENST00000556098 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
CHGA-205ENST00000556098 RNF17Q9BXT8 1623 aaKnown RBP17.24■□□□□ 0.35
CHGA-205ENST00000556098 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
CHGA-205ENST00000556098 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
CHGA-205ENST00000556098 SYNMO15061 1565 aa17.22■□□□□ 0.35
CHGA-205ENST00000556098 THEMISQ8N1K5 641 aaPredicted RBP17.21■□□□□ 0.35
CHGA-205ENST00000556098 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
CHGA-205ENST00000556098 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
CHGA-205ENST00000556098 NLRP1Q9C000 1473 aa17.2■□□□□ 0.34
CHGA-205ENST00000556098 XIRP1Q702N8 1843 aaKnown RBP17.2■□□□□ 0.34
CHGA-205ENST00000556098 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
CHGA-205ENST00000556098 MIA2Q96PC5 1412 aa17.19■□□□□ 0.34
CHGA-205ENST00000556098 ARHGEF5Q12774 1597 aa17.17■□□□□ 0.34
CHGA-205ENST00000556098 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
CHGA-205ENST00000556098 ABCC3O15438 1527 aa17.15■□□□□ 0.34
CHGA-205ENST00000556098 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
CHGA-205ENST00000556098 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
CHGA-205ENST00000556098 MED14O60244 1454 aa17.14■□□□□ 0.33
CHGA-205ENST00000556098 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
CHGA-205ENST00000556098 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
CHGA-205ENST00000556098 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
CHGA-205ENST00000556098 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
CHGA-205ENST00000556098 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CHGA-205ENST00000556098 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
CHGA-205ENST00000556098 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
CHGA-205ENST00000556098 CROCC2H7BZ55 1655 aa17.08■□□□□ 0.32
CHGA-205ENST00000556098 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
CHGA-205ENST00000556098 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
CHGA-205ENST00000556098 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
CHGA-205ENST00000556098 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
CHGA-205ENST00000556098 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
CHGA-205ENST00000556098 MYO5BQ9ULV0 1848 aa17.03■□□□□ 0.32
CHGA-205ENST00000556098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHGA-205ENST00000556098 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
CHGA-205ENST00000556098 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
CHGA-205ENST00000556098 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
CHGA-205ENST00000556098 LRRC9Q6ZRR7 1453 aa17■□□□□ 0.31
CHGA-205ENST00000556098 EID1Q9Y6B2 187 aa17■□□□□ 0.31
CHGA-205ENST00000556098 MAP3K1Q13233 1512 aa17■□□□□ 0.31
CHGA-205ENST00000556098 LTKP29376 864 aa16.99■□□□□ 0.31
CHGA-205ENST00000556098 SLIT1O75093 1534 aa16.98■□□□□ 0.31
CHGA-205ENST00000556098 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
CHGA-205ENST00000556098 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
CHGA-205ENST00000556098 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
CHGA-205ENST00000556098 BCANQ96GW7 911 aa16.96■□□□□ 0.31
CHGA-205ENST00000556098 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
CHGA-205ENST00000556098 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.3
CHGA-205ENST00000556098 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 APLP2Q06481 763 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
CHGA-205ENST00000556098 KDM5AP29375 1690 aaKnown RBP16.93■□□□□ 0.3
CHGA-205ENST00000556098 SLC26A8Q96RN1 970 aa16.92■□□□□ 0.3
CHGA-205ENST00000556098 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
CHGA-205ENST00000556098 KANK1Q14678 1352 aa16.91■□□□□ 0.3
CHGA-205ENST00000556098 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
CHGA-205ENST00000556098 POTEAQ6S8J7 498 aa16.91■□□□□ 0.3
CHGA-205ENST00000556098 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
CHGA-205ENST00000556098 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
CHGA-205ENST00000556098 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
CHGA-205ENST00000556098 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
CHGA-205ENST00000556098 ADGRB3O60242 1522 aa16.88■□□□□ 0.29
CHGA-205ENST00000556098 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
CHGA-205ENST00000556098 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
CHGA-205ENST00000556098 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
CHGA-205ENST00000556098 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
CHGA-205ENST00000556098 MSH6P52701 1360 aa16.85■□□□□ 0.29
CHGA-205ENST00000556098 ABCC5O15440 1437 aa16.85■□□□□ 0.29
CHGA-205ENST00000556098 TET3O43151 1660 aa16.85■□□□□ 0.29
CHGA-205ENST00000556098 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms