RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PELP1Q8IZL8 1130 aaKnown RBP5.58□□□□□ -1.52
MTHFD1-212ENST00000555858 A6NJR5 290 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 C7P10643 843 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 MDM2Q00987 491 aaPredicted RBP5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 TYW1BQ6NUM6 668 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 SLAIN1Q8ND83 568 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 DCBLD2Q96PD2 775 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 C1orf115Q9H7X2 142 aa5.57□□□□□ -1.52
MTHFD1-212ENST00000555858 GABBR2O75899 941 aa5.56□□□□□ -1.52
MTHFD1-212ENST00000555858 FBXW7Q969H0 707 aa5.56□□□□□ -1.52
MTHFD1-212ENST00000555858 RBM33Q96EV2 1170 aaKnown RBP5.56□□□□□ -1.52
MTHFD1-212ENST00000555858 ARID3AQ99856 593 aa5.56□□□□□ -1.52
MTHFD1-212ENST00000555858 PCDHGA10Q9Y5H3 936 aa5.56□□□□□ -1.52
MTHFD1-212ENST00000555858 POTEFA5A3E0 1075 aa5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 APBB1O00213 710 aa5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 SSTR3P32745 418 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 SKIV2LQ15477 1246 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 TSR1Q2NL82 804 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 PHOX2BQ99453 314 aa5.55□□□□□ -1.52
MTHFD1-212ENST00000555858 ARID3CA6NKF2 412 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 OATP04181 439 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 MCM6Q14566 821 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 CERKQ8TCT0 537 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 JPH4Q96JJ6 628 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 BEGAINQ9BUH8 593 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 PCDHGA4Q9Y5G9 962 aa5.54□□□□□ -1.52
MTHFD1-212ENST00000555858 TRAK2O60296 914 aa5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 METTL3Q86U44 580 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 CLUAP1Q96AJ1 413 aa5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 FAM217BQ9NTX9 383 aaPredicted RBP5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 PODXL2Q9NZ53 605 aa5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 METRNQ9UJH8 293 aa5.53□□□□□ -1.52
MTHFD1-212ENST00000555858 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.52□□□□□ -1.53
MTHFD1-212ENST00000555858 KDM4FA0A1W2PPD8 638 aa5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 FOSBP53539 338 aa5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 PADI6Q6TGC4 694 aa5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 PXYLP1Q8TE99 480 aa5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 RBM27Q9P2N5 1060 aaKnown RBP5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 ADGRG1Q9Y653 693 aa5.51□□□□□ -1.53
MTHFD1-212ENST00000555858 FAM161AQ3B820 660 aa5.5□□□□□ -1.53
MTHFD1-212ENST00000555858 C6orf132Q5T0Z8 1188 aa5.5□□□□□ -1.53
MTHFD1-212ENST00000555858 PROCA1Q8NCQ7 364 aaPredicted RBP5.5□□□□□ -1.53
MTHFD1-212ENST00000555858 ATP1B4Q9UN42 357 aaPredicted RBP5.5□□□□□ -1.53
MTHFD1-212ENST00000555858 RAD21O60216 631 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 DIXDC1Q155Q3 683 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 MYSM1Q5VVJ2 828 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 PROSER2Q86WR7 435 aaPredicted RBP5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 CCDC82Q8N4S0 544 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 TTC13Q8NBP0 860 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 ZDHHC16Q969W1 377 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 POLR3EQ9NVU0 708 aa5.49□□□□□ -1.53
MTHFD1-212ENST00000555858 CLK2P49760 499 aaKnown RBP5.48□□□□□ -1.53
MTHFD1-212ENST00000555858 ZNF454Q8N9F8 522 aa5.48□□□□□ -1.53
MTHFD1-212ENST00000555858 NLRP7Q8WX94 980 aa5.48□□□□□ -1.53
MTHFD1-212ENST00000555858 SPDYE5A6NIY4 337 aa5.47□□□□□ -1.53
MTHFD1-212ENST00000555858 TRIM26Q12899 539 aaPredicted RBP5.47□□□□□ -1.53
MTHFD1-212ENST00000555858 BANK1Q8NDB2 785 aa5.47□□□□□ -1.53
MTHFD1-212ENST00000555858 RBM46Q8TBY0 533 aaKnown RBP5.47□□□□□ -1.53
MTHFD1-212ENST00000555858 TBC1D2Q9BYX2 928 aa5.47□□□□□ -1.53
MTHFD1-212ENST00000555858 PRSS12P56730 875 aa5.46□□□□□ -1.54
MTHFD1-212ENST00000555858 FNBP4Q8N3X1 1017 aaPredicted RBP5.46□□□□□ -1.54
MTHFD1-212ENST00000555858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 TMEM259Q4ZIN3 620 aa5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 CDCA7LQ96GN5 454 aa5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 POM121Q96HA1 1249 aa5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 ADAM33Q9BZ11 813 aa5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 ZNF777Q9ULD5 760 aaPredicted RBP5.45□□□□□ -1.54
MTHFD1-212ENST00000555858 NUDT7P0C024 238 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 POTEIP0CG38 1075 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 PDIA4P13667 645 aaKnown RBP5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 HRCP23327 699 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 RFC5P40937 340 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 DOK7Q18PE1 504 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 PPP2R2DQ66LE6 453 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 COG6Q9Y2V7 657 aa5.44□□□□□ -1.54
MTHFD1-212ENST00000555858 RIMBP2O15034 1052 aa5.43□□□□□ -1.54
MTHFD1-212ENST00000555858 TUSC1Q2TAM9 212 aa5.43□□□□□ -1.54
MTHFD1-212ENST00000555858 CCDC97Q96F63 343 aaPredicted RBP5.43□□□□□ -1.54
MTHFD1-212ENST00000555858 ZSWIM6Q9HCJ5 1215 aa5.43□□□□□ -1.54
MTHFD1-212ENST00000555858 SERPINA10Q9UK55 444 aa5.43□□□□□ -1.54
MTHFD1-212ENST00000555858 RCCD1A6NED2 376 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 ARSIQ5FYB1 569 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 RIC3Q7Z5B4 369 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 SULF1Q8IWU6 871 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 SPIRE2Q8WWL2 714 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 EYA1Q99502 592 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 SNRKQ9NRH2 765 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 LIMD1Q9UGP4 676 aa5.42□□□□□ -1.54
MTHFD1-212ENST00000555858 SPTLC1O15269 473 aa5.41□□□□□ -1.54
MTHFD1-212ENST00000555858 CD46P15529 392 aa5.41□□□□□ -1.54
MTHFD1-212ENST00000555858 PSDA5PKW4 1024 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 SOCS7O14512 581 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 HOXB3P14651 431 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 DNAJB2P25686 324 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 PPP4R3BQ5MIZ7 849 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 FBXO31Q5XUX0 539 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 RSBN1LQ6PCB5 846 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 NUTM1Q86Y26 1132 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 KHSRPQ92945 711 aaKnown RBP eCLIP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms