RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 TSPY4P0CV99 314 aa30.98■■■□□ 2.55
FOXN3-211ENST00000555855 TSPY10P0CW01 314 aa30.98■■■□□ 2.55
FOXN3-211ENST00000555855 FBXO31Q5XUX0 539 aaPredicted RBP30.98■■■□□ 2.55
FOXN3-211ENST00000555855 CCDC141Q6ZP82 1450 aa30.96■■■□□ 2.55
FOXN3-211ENST00000555855 SPATA31D1Q6ZQQ2 1576 aa30.96■■■□□ 2.55
FOXN3-211ENST00000555855 TNRQ92752 1358 aa30.95■■■□□ 2.55
FOXN3-211ENST00000555855 NCOA2Q15596 1464 aa30.94■■■□□ 2.54
FOXN3-211ENST00000555855 DNMT1P26358 1616 aaKnown RBP30.92■■■□□ 2.54
FOXN3-211ENST00000555855 THEMISQ8N1K5 641 aaPredicted RBP30.91■■■□□ 2.54
FOXN3-211ENST00000555855 CAMSAP2Q08AD1 1489 aa30.9■■■□□ 2.54
FOXN3-211ENST00000555855 ANKLE2Q86XL3 938 aa30.9■■■□□ 2.54
FOXN3-211ENST00000555855 PZPP20742 1482 aa30.87■■■□□ 2.53
FOXN3-211ENST00000555855 KDM5DQ9BY66 1539 aa30.87■■■□□ 2.53
FOXN3-211ENST00000555855 FAM135AQ9P2D6 1515 aa30.86■■■□□ 2.53
FOXN3-211ENST00000555855 MIA2Q96PC5 1412 aa30.84■■■□□ 2.53
FOXN3-211ENST00000555855 TOM1O60784 492 aa30.84■■■□□ 2.53
FOXN3-211ENST00000555855 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
FOXN3-211ENST00000555855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.81■■■□□ 2.52
FOXN3-211ENST00000555855 PIP4K2BP78356 416 aa30.79■■■□□ 2.52
FOXN3-211ENST00000555855 ARHGEF5Q12774 1597 aa30.79■■■□□ 2.52
FOXN3-211ENST00000555855 NLRP1Q9C000 1473 aa30.77■■■□□ 2.52
FOXN3-211ENST00000555855 SHANK2Q9UPX8 1470 aa30.77■■■□□ 2.52
FOXN3-211ENST00000555855 POLR1AO95602 1720 aaPredicted RBP30.77■■■□□ 2.52
FOXN3-211ENST00000555855 CPS1P31327 1500 aa30.77■■■□□ 2.52
FOXN3-211ENST00000555855 UGGT1Q9NYU2 1555 aa30.73■■■□□ 2.51
FOXN3-211ENST00000555855 NEURL4Q96JN8 1562 aa30.72■■■□□ 2.51
FOXN3-211ENST00000555855 HSPA1LP34931 641 aa30.72■■■□□ 2.51
FOXN3-211ENST00000555855 LRRC9Q6ZRR7 1453 aa30.71■■■□□ 2.51
FOXN3-211ENST00000555855 NPHP4O75161 1426 aaPredicted RBP30.7■■■□□ 2.5
FOXN3-211ENST00000555855 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
FOXN3-211ENST00000555855 LOC105371045A0A1W2PR82 267 aa30.67■■■□□ 2.5
FOXN3-211ENST00000555855 MED14O60244 1454 aa30.66■■■□□ 2.5
FOXN3-211ENST00000555855 KANK4Q5T7N3 995 aaPredicted RBP30.65■■■□□ 2.5
FOXN3-211ENST00000555855 MAST1Q9Y2H9 1570 aa30.63■■■□□ 2.49
FOXN3-211ENST00000555855 DEPDC5O75140 1603 aa30.62■■■□□ 2.49
FOXN3-211ENST00000555855 ABCC3O15438 1527 aa30.61■■■□□ 2.49
FOXN3-211ENST00000555855 RNF17Q9BXT8 1623 aaKnown RBP30.61■■■□□ 2.49
FOXN3-211ENST00000555855 VWDEQ8N2E2 1590 aa30.6■■■□□ 2.49
FOXN3-211ENST00000555855 MYOM3Q5VTT5 1437 aa30.59■■■□□ 2.49
FOXN3-211ENST00000555855 ZC3H13Q5T200 1668 aaKnown RBP30.58■■■□□ 2.49
FOXN3-211ENST00000555855 EIF2AK4Q9P2K8 1649 aaKnown RBP30.57■■■□□ 2.48
FOXN3-211ENST00000555855 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
FOXN3-211ENST00000555855 MAP3K1Q13233 1512 aa30.57■■■□□ 2.48
FOXN3-211ENST00000555855 ERVK-7P63135 1459 aa30.56■■■□□ 2.48
FOXN3-211ENST00000555855 IQGAP1P46940 1657 aa30.55■■■□□ 2.48
FOXN3-211ENST00000555855 APLP2Q06481 763 aa30.54■■■□□ 2.48
FOXN3-211ENST00000555855 DUOX2Q9NRD8 1548 aa30.52■■■□□ 2.48
FOXN3-211ENST00000555855 TXNDC2Q86VQ3 553 aa30.51■■■□□ 2.47
FOXN3-211ENST00000555855 RRP7BPQ9NSQ0 103 aa30.5■■■□□ 2.47
FOXN3-211ENST00000555855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.48■■■□□ 2.472e-7■□□□□ 9.7
FOXN3-211ENST00000555855 PHF23Q9BUL5 403 aaPredicted RBP30.48■■■□□ 2.47
FOXN3-211ENST00000555855 EID1Q9Y6B2 187 aa30.48■■■□□ 2.47
FOXN3-211ENST00000555855 MED1Q15648 1581 aaPredicted RBP30.47■■■□□ 2.47
FOXN3-211ENST00000555855 KIF15Q9NS87 1388 aa30.47■■■□□ 2.47
FOXN3-211ENST00000555855 CEP152O94986 1710 aa30.47■■■□□ 2.47
FOXN3-211ENST00000555855 MROH1Q8NDA8 1641 aa30.46■■■□□ 2.47
FOXN3-211ENST00000555855 LRRC7Q96NW7 1537 aa30.46■■■□□ 2.47
FOXN3-211ENST00000555855 SENP3Q9H4L4 574 aaPredicted RBP30.45■■■□□ 2.47
FOXN3-211ENST00000555855 STAG3Q9UJ98 1225 aa30.45■■■□□ 2.47
FOXN3-211ENST00000555855 LTKP29376 864 aa30.44■■■□□ 2.46
FOXN3-211ENST00000555855 ARHGAP31Q2M1Z3 1444 aa30.43■■■□□ 2.46
FOXN3-211ENST00000555855 SCAF11Q99590 1463 aaKnown RBP30.43■■■□□ 2.46
FOXN3-211ENST00000555855 UBR1Q8IWV7 1749 aa30.42■■■□□ 2.46
FOXN3-211ENST00000555855 KANK1Q14678 1352 aa30.41■■■□□ 2.46
FOXN3-211ENST00000555855 ABCC5O15440 1437 aa30.4■■■□□ 2.46
FOXN3-211ENST00000555855 ERBINQ96RT1 1412 aa30.4■■■□□ 2.46
FOXN3-211ENST00000555855 STRCP1A6NGW2 1772 aa30.4■■■□□ 2.46
FOXN3-211ENST00000555855 ALKQ9UM73 1620 aa30.38■■■□□ 2.45
FOXN3-211ENST00000555855 SYNMO15061 1565 aa30.37■■■□□ 2.45
FOXN3-211ENST00000555855 ARHGAP23Q9P227 1491 aa30.36■■■□□ 2.45
FOXN3-211ENST00000555855 SLIT1O75093 1534 aa30.36■■■□□ 2.45
FOXN3-211ENST00000555855 PRDM15P57071 1507 aaPredicted RBP30.34■■■□□ 2.45
FOXN3-211ENST00000555855 CHIC2Q9UKJ5 165 aa30.34■■■□□ 2.45
FOXN3-211ENST00000555855 PTPN23Q9H3S7 1636 aa30.33■■■□□ 2.45
FOXN3-211ENST00000555855 DAPK1P53355 1430 aa30.32■■■□□ 2.44
FOXN3-211ENST00000555855 ANKRD30AQ9BXX3 1397 aa30.31■■■□□ 2.44
FOXN3-211ENST00000555855 TMEM2Q9UHN6 1383 aa30.31■■■□□ 2.44
FOXN3-211ENST00000555855 IDI1Q13907 227 aa30.3■■■□□ 2.44
FOXN3-211ENST00000555855 CROCC2H7BZ55 1655 aa30.28■■■□□ 2.44
FOXN3-211ENST00000555855 FGD6Q6ZV73 1430 aa30.26■■■□□ 2.43
FOXN3-211ENST00000555855 PIK3C2BO00750 1634 aa30.25■■■□□ 2.43
FOXN3-211ENST00000555855 KCNA6P17658 529 aa30.23■■■□□ 2.43
FOXN3-211ENST00000555855 PROSER2Q86WR7 435 aaPredicted RBP30.21■■■□□ 2.43
FOXN3-211ENST00000555855 BCANQ96GW7 911 aa30.21■■■□□ 2.43
FOXN3-211ENST00000555855 EFCAB6Q5THR3 1501 aa30.21■■■□□ 2.43
FOXN3-211ENST00000555855 SLC26A8Q96RN1 970 aa30.2■■■□□ 2.43
FOXN3-211ENST00000555855 SLC52A1Q9NWF4 448 aa30.2■■■□□ 2.43
FOXN3-211ENST00000555855 LMTK2Q8IWU2 1503 aa30.2■■■□□ 2.42
FOXN3-211ENST00000555855 TMEM94Q12767 1356 aa30.17■■■□□ 2.42
FOXN3-211ENST00000555855 FAM135BQ49AJ0 1406 aa30.17■■■□□ 2.42
FOXN3-211ENST00000555855 KDM5AP29375 1690 aaKnown RBP30.16■■■□□ 2.42
FOXN3-211ENST00000555855 XIRP1Q702N8 1843 aaKnown RBP30.15■■■□□ 2.42
FOXN3-211ENST00000555855 FAM50AQ14320 339 aaKnown RBP30.14■■■□□ 2.42
FOXN3-211ENST00000555855 HDGFP51858 240 aaKnown RBP30.13■■■□□ 2.41
FOXN3-211ENST00000555855 NOS1P29475 1434 aa30.13■■■□□ 2.41
FOXN3-211ENST00000555855 RBM33Q96EV2 1170 aaKnown RBP30.1■■■□□ 2.41
FOXN3-211ENST00000555855 TET3O43151 1660 aa30.08■■■□□ 2.41
FOXN3-211ENST00000555855 RGS17Q9UGC6 210 aaPredicted RBP30.08■■■□□ 2.41
FOXN3-211ENST00000555855 PPP1R15AO75807 674 aaPredicted RBP30.05■■■□□ 2.4
FOXN3-211ENST00000555855 ADGRL2O95490 1459 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms