RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PLA2R1Q13018 1463 aa15.33■□□□□ 0.04
PRKCH-218ENST00000555628 MYO3AQ8NEV4 1616 aa15.32■□□□□ 0.04
PRKCH-218ENST00000555628 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
PRKCH-218ENST00000555628 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
PRKCH-218ENST00000555628 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
PRKCH-218ENST00000555628 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
PRKCH-218ENST00000555628 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
PRKCH-218ENST00000555628 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
PRKCH-218ENST00000555628 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
PRKCH-218ENST00000555628 ZMYM3Q14202 1370 aa15.26■□□□□ 0.03
PRKCH-218ENST00000555628 CLTCQ00610 1675 aaKnown RBP15.26■□□□□ 0.03
PRKCH-218ENST00000555628 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
PRKCH-218ENST00000555628 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
PRKCH-218ENST00000555628 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
PRKCH-218ENST00000555628 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
PRKCH-218ENST00000555628 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
PRKCH-218ENST00000555628 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
PRKCH-218ENST00000555628 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
PRKCH-218ENST00000555628 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
PRKCH-218ENST00000555628 NEURL4Q96JN8 1562 aa15.23■□□□□ 0.03
PRKCH-218ENST00000555628 ALKQ9UM73 1620 aa15.22■□□□□ 0.03
PRKCH-218ENST00000555628 GPATCH8Q9UKJ3 1502 aaKnown RBP15.22■□□□□ 0.03
PRKCH-218ENST00000555628 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
PRKCH-218ENST00000555628 UBAP1LF5GYI3 381 aa15.2■□□□□ 0.02
PRKCH-218ENST00000555628 PKD2Q13563 968 aa15.2■□□□□ 0.02
PRKCH-218ENST00000555628 DNMT1P26358 1616 aaKnown RBP15.2■□□□□ 0.02
PRKCH-218ENST00000555628 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
PRKCH-218ENST00000555628 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
PRKCH-218ENST00000555628 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
PRKCH-218ENST00000555628 A2MP01023 1474 aa15.19■□□□□ 0.02
PRKCH-218ENST00000555628 POLR1AO95602 1720 aaPredicted RBP15.18■□□□□ 0.02
PRKCH-218ENST00000555628 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
PRKCH-218ENST00000555628 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
PRKCH-218ENST00000555628 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
PRKCH-218ENST00000555628 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
PRKCH-218ENST00000555628 CPS1P31327 1500 aa15.15■□□□□ 0.02
PRKCH-218ENST00000555628 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
PRKCH-218ENST00000555628 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
PRKCH-218ENST00000555628 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
PRKCH-218ENST00000555628 HSPA1LP34931 641 aa15.13■□□□□ 0.01
PRKCH-218ENST00000555628 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
PRKCH-218ENST00000555628 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
PRKCH-218ENST00000555628 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
PRKCH-218ENST00000555628 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
PRKCH-218ENST00000555628 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
PRKCH-218ENST00000555628 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
PRKCH-218ENST00000555628 FAM135AQ9P2D6 1515 aa15.09■□□□□ 0.01
PRKCH-218ENST00000555628 PZPP20742 1482 aa15.08■□□□□ 0.01
PRKCH-218ENST00000555628 DEPDC5O75140 1603 aa15.08■□□□□ 0
PRKCH-218ENST00000555628 MED14O60244 1454 aa15.08■□□□□ 0
PRKCH-218ENST00000555628 TIAM1Q13009 1591 aa15.07■□□□□ 0
PRKCH-218ENST00000555628 STRCP1A6NGW2 1772 aa15.07■□□□□ 0
PRKCH-218ENST00000555628 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
PRKCH-218ENST00000555628 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
PRKCH-218ENST00000555628 KDM5DQ9BY66 1539 aa15.05■□□□□ -0
PRKCH-218ENST00000555628 TNRQ92752 1358 aa15.04■□□□□ -0
PRKCH-218ENST00000555628 GGT6Q6P531 493 aa15.04■□□□□ -0
PRKCH-218ENST00000555628 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
PRKCH-218ENST00000555628 TOM1O60784 492 aa15.02■□□□□ -0
PRKCH-218ENST00000555628 SYNMO15061 1565 aa15.02□□□□□ -0.01
PRKCH-218ENST00000555628 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
PRKCH-218ENST00000555628 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
PRKCH-218ENST00000555628 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
PRKCH-218ENST00000555628 CFDP1Q9UEE9 299 aaPredicted RBP15.01□□□□□ -0.01
PRKCH-218ENST00000555628 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
PRKCH-218ENST00000555628 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
PRKCH-218ENST00000555628 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
PRKCH-218ENST00000555628 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
PRKCH-218ENST00000555628 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
PRKCH-218ENST00000555628 LRRC7Q96NW7 1537 aa15□□□□□ -0.01
PRKCH-218ENST00000555628 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
PRKCH-218ENST00000555628 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
PRKCH-218ENST00000555628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRKCH-218ENST00000555628 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
PRKCH-218ENST00000555628 POTEHQ6S545 545 aa14.98□□□□□ -0.01
PRKCH-218ENST00000555628 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
PRKCH-218ENST00000555628 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
PRKCH-218ENST00000555628 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
PRKCH-218ENST00000555628 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
PRKCH-218ENST00000555628 XIRP1Q702N8 1843 aaKnown RBP14.95□□□□□ -0.02
PRKCH-218ENST00000555628 RGS17Q9UGC6 210 aaPredicted RBP14.95□□□□□ -0.02
PRKCH-218ENST00000555628 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
PRKCH-218ENST00000555628 ABCC3O15438 1527 aa14.93□□□□□ -0.02
PRKCH-218ENST00000555628 MROH1Q8NDA8 1641 aa14.93□□□□□ -0.02
PRKCH-218ENST00000555628 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
PRKCH-218ENST00000555628 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PRKCH-218ENST00000555628 FKBP8Q14318 412 aa14.92□□□□□ -0.02
PRKCH-218ENST00000555628 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
PRKCH-218ENST00000555628 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
PRKCH-218ENST00000555628 KIF3BO15066 747 aa14.91□□□□□ -0.02
PRKCH-218ENST00000555628 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
PRKCH-218ENST00000555628 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
PRKCH-218ENST00000555628 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
PRKCH-218ENST00000555628 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
PRKCH-218ENST00000555628 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
PRKCH-218ENST00000555628 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
PRKCH-218ENST00000555628 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRKCH-218ENST00000555628 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
PRKCH-218ENST00000555628 SLIT1O75093 1534 aa14.87□□□□□ -0.03
PRKCH-218ENST00000555628 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms