RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 KANK1Q14678 1352 aa9.91□□□□□ -0.82
PRKCH-217ENST00000555604 MLECQ14165 292 aa9.91□□□□□ -0.82
PRKCH-217ENST00000555604 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.82
PRKCH-217ENST00000555604 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
PRKCH-217ENST00000555604 KDM5DQ9BY66 1539 aa9.89□□□□□ -0.83
PRKCH-217ENST00000555604 HRCP23327 699 aa9.89□□□□□ -0.83
PRKCH-217ENST00000555604 NAIPQ13075 1403 aa9.89□□□□□ -0.83
PRKCH-217ENST00000555604 SIGLEC1Q9BZZ2 1709 aa9.88□□□□□ -0.83
PRKCH-217ENST00000555604 PTPRMP28827 1452 aa9.88□□□□□ -0.83
PRKCH-217ENST00000555604 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
PRKCH-217ENST00000555604 PRDM15P57071 1507 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-217ENST00000555604 TRIM26Q12899 539 aaPredicted RBP9.87□□□□□ -0.83
PRKCH-217ENST00000555604 DEPDC5O75140 1603 aa9.86□□□□□ -0.83
PRKCH-217ENST00000555604 NPATQ14207 1427 aa9.86□□□□□ -0.83
PRKCH-217ENST00000555604 ARHGAP31Q2M1Z3 1444 aa9.86□□□□□ -0.83
PRKCH-217ENST00000555604 MROH2AA6NES4 1674 aa9.86□□□□□ -0.83
PRKCH-217ENST00000555604 ZC3H13Q5T200 1668 aaKnown RBP9.86□□□□□ -0.83
PRKCH-217ENST00000555604 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
PRKCH-217ENST00000555604 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
PRKCH-217ENST00000555604 FER1L4A9Z1Z3 1794 aa9.85□□□□□ -0.83
PRKCH-217ENST00000555604 SETD5Q9C0A6 1442 aa9.84□□□□□ -0.83
PRKCH-217ENST00000555604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRKCH-217ENST00000555604 NUP155O75694 1391 aa9.84□□□□□ -0.83
PRKCH-217ENST00000555604 PZPP20742 1482 aa9.84□□□□□ -0.83
PRKCH-217ENST00000555604 RPRD2Q5VT52 1461 aaKnown RBP9.84□□□□□ -0.83
PRKCH-217ENST00000555604 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
PRKCH-217ENST00000555604 GCC2Q8IWJ2 1684 aa9.83□□□□□ -0.84
PRKCH-217ENST00000555604 ABCC3O15438 1527 aa9.83□□□□□ -0.84
PRKCH-217ENST00000555604 MROH1Q8NDA8 1641 aa9.83□□□□□ -0.84
PRKCH-217ENST00000555604 UNC13BO14795 1591 aa9.83□□□□□ -0.84
PRKCH-217ENST00000555604 RIMS1Q86UR5 1692 aaKnown RBP9.82□□□□□ -0.84
PRKCH-217ENST00000555604 TRIM52Q96A61 297 aa9.8□□□□□ -0.84
PRKCH-217ENST00000555604 CLTCQ00610 1675 aaKnown RBP9.8□□□□□ -0.84
PRKCH-217ENST00000555604 IQGAP3Q86VI3 1631 aa9.79□□□□□ -0.84
PRKCH-217ENST00000555604 CEBPAP49715 358 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-217ENST00000555604 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
PRKCH-217ENST00000555604 TNRQ92752 1358 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 EFCAB6Q5THR3 1501 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 C3P01024 1663 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 UHRF1BP1Q6BDS2 1440 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 NLRP1Q9C000 1473 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 CAMSAP1Q5T5Y3 1602 aa9.78□□□□□ -0.84
PRKCH-217ENST00000555604 TET3O43151 1660 aa9.77□□□□□ -0.84
PRKCH-217ENST00000555604 SPATA31D1Q6ZQQ2 1576 aa9.77□□□□□ -0.85
PRKCH-217ENST00000555604 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
PRKCH-217ENST00000555604 SETD1BQ9UPS6 1966 aaKnown RBP9.77□□□□□ -0.85
PRKCH-217ENST00000555604 NOS1P29475 1434 aa9.76□□□□□ -0.85
PRKCH-217ENST00000555604 MPHOSPH9Q99550 1183 aa9.76□□□□□ -0.85
PRKCH-217ENST00000555604 ERVK-7P63135 1459 aa9.76□□□□□ -0.85
PRKCH-217ENST00000555604 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-217ENST00000555604 THEMISQ8N1K5 641 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-217ENST00000555604 PKD2Q13563 968 aa9.74□□□□□ -0.85
PRKCH-217ENST00000555604 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
PRKCH-217ENST00000555604 PTPRTO14522 1441 aa9.73□□□□□ -0.85
PRKCH-217ENST00000555604 CEP152O94986 1710 aa9.73□□□□□ -0.85
PRKCH-217ENST00000555604 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
PRKCH-217ENST00000555604 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
PRKCH-217ENST00000555604 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
PRKCH-217ENST00000555604 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
PRKCH-217ENST00000555604 IDI1Q13907 227 aa9.71□□□□□ -0.86
PRKCH-217ENST00000555604 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.86
PRKCH-217ENST00000555604 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
PRKCH-217ENST00000555604 PLA2R1Q13018 1463 aa9.7□□□□□ -0.86
PRKCH-217ENST00000555604 CEP170BQ9Y4F5 1589 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-217ENST00000555604 MYO3AQ8NEV4 1616 aa9.7□□□□□ -0.86
PRKCH-217ENST00000555604 E9PCH4 1651 aa9.7□□□□□ -0.86
PRKCH-217ENST00000555604 KDM5AP29375 1690 aaKnown RBP9.7□□□□□ -0.86
PRKCH-217ENST00000555604 ZNF142P52746 1687 aaPredicted RBP9.69□□□□□ -0.86
PRKCH-217ENST00000555604 UGGT1Q9NYU2 1555 aa9.69□□□□□ -0.86
PRKCH-217ENST00000555604 TRPM2O94759 1503 aa9.68□□□□□ -0.86
PRKCH-217ENST00000555604 ANKLE2Q86XL3 938 aa9.68□□□□□ -0.86
PRKCH-217ENST00000555604 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRKCH-217ENST00000555604 EID1Q9Y6B2 187 aa9.67□□□□□ -0.86
PRKCH-217ENST00000555604 SYNMO15061 1565 aa9.67□□□□□ -0.86
PRKCH-217ENST00000555604 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
PRKCH-217ENST00000555604 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
PRKCH-217ENST00000555604 STAC3Q96MF2 364 aa9.66□□□□□ -0.86
PRKCH-217ENST00000555604 PCGF6Q9BYE7 350 aa9.66□□□□□ -0.86
PRKCH-217ENST00000555604 PIK3C2BO00750 1634 aa9.66□□□□□ -0.86
PRKCH-217ENST00000555604 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
PRKCH-217ENST00000555604 NEURL4Q96JN8 1562 aa9.65□□□□□ -0.86
PRKCH-217ENST00000555604 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
PRKCH-217ENST00000555604 SLIT1O75093 1534 aa9.65□□□□□ -0.86
PRKCH-217ENST00000555604 ARHGAP23Q9P227 1491 aa9.65□□□□□ -0.87
PRKCH-217ENST00000555604 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.87
PRKCH-217ENST00000555604 ANKRD30BQ9BXX2 1392 aa9.64□□□□□ -0.87
PRKCH-217ENST00000555604 HSPA2P54652 639 aa9.64□□□□□ -0.87
PRKCH-217ENST00000555604 CHGAP10645 457 aaKnown RBP9.63□□□□□ -0.87
PRKCH-217ENST00000555604 FOXD1Q16676 465 aa9.63□□□□□ -0.87
PRKCH-217ENST00000555604 TXNDC2Q86VQ3 553 aa9.63□□□□□ -0.87
PRKCH-217ENST00000555604 MED14O60244 1454 aa9.63□□□□□ -0.87
PRKCH-217ENST00000555604 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
PRKCH-217ENST00000555604 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
PRKCH-217ENST00000555604 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-217ENST00000555604 TMEM131LA2VDJ0 1609 aa9.62□□□□□ -0.87
PRKCH-217ENST00000555604 SCAF11Q99590 1463 aaKnown RBP9.61□□□□□ -0.87
PRKCH-217ENST00000555604 ZNF326Q5BKZ1 582 aaKnown RBP9.61□□□□□ -0.87
PRKCH-217ENST00000555604 DHX57Q6P158 1386 aaKnown RBP9.61□□□□□ -0.87
PRKCH-217ENST00000555604 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms