RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
XRCC3-213ENST00000555451 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
XRCC3-213ENST00000555451 DIP2CQ9Y2E4 1556 aa16.28■□□□□ 0.2
XRCC3-213ENST00000555451 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
XRCC3-213ENST00000555451 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
XRCC3-213ENST00000555451 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
XRCC3-213ENST00000555451 BCORL1Q5H9F3 1711 aa16.26■□□□□ 0.19
XRCC3-213ENST00000555451 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
XRCC3-213ENST00000555451 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
XRCC3-213ENST00000555451 NUP155O75694 1391 aa16.25■□□□□ 0.19
XRCC3-213ENST00000555451 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
XRCC3-213ENST00000555451 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
XRCC3-213ENST00000555451 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
XRCC3-213ENST00000555451 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
XRCC3-213ENST00000555451 A2MP01023 1474 aa16.22■□□□□ 0.19
XRCC3-213ENST00000555451 AGLP35573 1532 aa16.22■□□□□ 0.19
XRCC3-213ENST00000555451 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
XRCC3-213ENST00000555451 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
XRCC3-213ENST00000555451 MADDQ8WXG6 1647 aa16.18■□□□□ 0.18
XRCC3-213ENST00000555451 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
XRCC3-213ENST00000555451 PRDM15P57071 1507 aaPredicted RBP16.18■□□□□ 0.18
XRCC3-213ENST00000555451 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
XRCC3-213ENST00000555451 MLECQ14165 292 aa16.17■□□□□ 0.18
XRCC3-213ENST00000555451 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
XRCC3-213ENST00000555451 PTPRMP28827 1452 aa16.16■□□□□ 0.18
XRCC3-213ENST00000555451 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
XRCC3-213ENST00000555451 KANK1Q14678 1352 aa16.15■□□□□ 0.18
XRCC3-213ENST00000555451 PKD2Q13563 968 aa16.15■□□□□ 0.18
XRCC3-213ENST00000555451 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
XRCC3-213ENST00000555451 KIF3BO15066 747 aa16.13■□□□□ 0.17
XRCC3-213ENST00000555451 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
XRCC3-213ENST00000555451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
XRCC3-213ENST00000555451 TET3O43151 1660 aa16.13■□□□□ 0.17
XRCC3-213ENST00000555451 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
XRCC3-213ENST00000555451 FOXD1Q16676 465 aa16.12■□□□□ 0.17
XRCC3-213ENST00000555451 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
XRCC3-213ENST00000555451 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
XRCC3-213ENST00000555451 FER1L4A9Z1Z3 1794 aa16.1■□□□□ 0.17
XRCC3-213ENST00000555451 LMTK2Q8IWU2 1503 aa16.1■□□□□ 0.17
XRCC3-213ENST00000555451 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
XRCC3-213ENST00000555451 E9PCH4 1651 aa16.08■□□□□ 0.16
XRCC3-213ENST00000555451 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
XRCC3-213ENST00000555451 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
XRCC3-213ENST00000555451 CEP152O94986 1710 aa16.05■□□□□ 0.16
XRCC3-213ENST00000555451 EFCAB6Q5THR3 1501 aa16.05■□□□□ 0.16
XRCC3-213ENST00000555451 GGT6Q6P531 493 aa16.05■□□□□ 0.16
XRCC3-213ENST00000555451 ESF1Q9H501 851 aaKnown RBP16.05■□□□□ 0.16
XRCC3-213ENST00000555451 SPHKAPQ2M3C7 1700 aa16.03■□□□□ 0.16
XRCC3-213ENST00000555451 ABCC3O15438 1527 aa16.03■□□□□ 0.16
XRCC3-213ENST00000555451 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.16
XRCC3-213ENST00000555451 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
XRCC3-213ENST00000555451 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.16
XRCC3-213ENST00000555451 FBXO41Q8TF61 875 aa16.02■□□□□ 0.16
XRCC3-213ENST00000555451 TRPM2O94759 1503 aa16.02■□□□□ 0.15
XRCC3-213ENST00000555451 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
XRCC3-213ENST00000555451 PTPRTO14522 1441 aa16.01■□□□□ 0.15
XRCC3-213ENST00000555451 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
XRCC3-213ENST00000555451 ZMYM3Q14202 1370 aa16■□□□□ 0.15
XRCC3-213ENST00000555451 MROH2AA6NES4 1674 aa16■□□□□ 0.15
XRCC3-213ENST00000555451 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
XRCC3-213ENST00000555451 C3P01024 1663 aa15.99■□□□□ 0.15
XRCC3-213ENST00000555451 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
XRCC3-213ENST00000555451 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
XRCC3-213ENST00000555451 CLTCQ00610 1675 aaKnown RBP15.97■□□□□ 0.15
XRCC3-213ENST00000555451 ARHGAP31Q2M1Z3 1444 aa15.96■□□□□ 0.15
XRCC3-213ENST00000555451 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.15
XRCC3-213ENST00000555451 NPATQ14207 1427 aa15.95■□□□□ 0.14
XRCC3-213ENST00000555451 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
XRCC3-213ENST00000555451 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
XRCC3-213ENST00000555451 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
XRCC3-213ENST00000555451 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
XRCC3-213ENST00000555451 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
XRCC3-213ENST00000555451 KIF1BO60333 1816 aa15.89■□□□□ 0.13
XRCC3-213ENST00000555451 NOS1P29475 1434 aa15.89■□□□□ 0.13
XRCC3-213ENST00000555451 UHRF1BP1Q6BDS2 1440 aa15.89■□□□□ 0.13
XRCC3-213ENST00000555451 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
XRCC3-213ENST00000555451 HSPA2P54652 639 aa15.86■□□□□ 0.13
XRCC3-213ENST00000555451 FBXO31Q5XUX0 539 aaPredicted RBP15.86■□□□□ 0.13
XRCC3-213ENST00000555451 PIK3C2BO00750 1634 aa15.86■□□□□ 0.13
XRCC3-213ENST00000555451 SYNMO15061 1565 aa15.85■□□□□ 0.13
XRCC3-213ENST00000555451 UGGT1Q9NYU2 1555 aa15.85■□□□□ 0.13
XRCC3-213ENST00000555451 CFAP65Q6ZU64 1925 aaKnown RBP15.84■□□□□ 0.13
XRCC3-213ENST00000555451 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
XRCC3-213ENST00000555451 NBPF8Q3BBV2 869 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 TNRQ92752 1358 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 ERVK-7P63135 1459 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 RALGAPBQ86X10 1494 aa15.83■□□□□ 0.12
XRCC3-213ENST00000555451 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
XRCC3-213ENST00000555451 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
XRCC3-213ENST00000555451 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
XRCC3-213ENST00000555451 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
XRCC3-213ENST00000555451 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
XRCC3-213ENST00000555451 SLC52A1Q9NWF4 448 aa15.8■□□□□ 0.12
XRCC3-213ENST00000555451 ZNF142P52746 1687 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-213ENST00000555451 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
XRCC3-213ENST00000555451 CEP170BQ9Y4F5 1589 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-213ENST00000555451 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
XRCC3-213ENST00000555451 MYOM2P54296 1465 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms