RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
IFT43-210ENST00000555370 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
IFT43-210ENST00000555370 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
IFT43-210ENST00000555370 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
IFT43-210ENST00000555370 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
IFT43-210ENST00000555370 ATP10AO60312 1499 aa17.31■□□□□ 0.36
IFT43-210ENST00000555370 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
IFT43-210ENST00000555370 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
IFT43-210ENST00000555370 PKD2Q13563 968 aa17.3■□□□□ 0.36
IFT43-210ENST00000555370 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
IFT43-210ENST00000555370 NAIPQ13075 1403 aa17.3■□□□□ 0.36
IFT43-210ENST00000555370 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
IFT43-210ENST00000555370 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
IFT43-210ENST00000555370 C3P01024 1663 aa17.26■□□□□ 0.35
IFT43-210ENST00000555370 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
IFT43-210ENST00000555370 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
IFT43-210ENST00000555370 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
IFT43-210ENST00000555370 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
IFT43-210ENST00000555370 HRCP23327 699 aa17.24■□□□□ 0.35
IFT43-210ENST00000555370 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
IFT43-210ENST00000555370 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
IFT43-210ENST00000555370 ANKRD30AQ9BXX3 1397 aa17.23■□□□□ 0.35
IFT43-210ENST00000555370 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
IFT43-210ENST00000555370 CPS1P31327 1500 aa17.22■□□□□ 0.35
IFT43-210ENST00000555370 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
IFT43-210ENST00000555370 DHX57Q6P158 1386 aaKnown RBP17.2■□□□□ 0.34
IFT43-210ENST00000555370 TSPY4P0CV99 314 aa17.2■□□□□ 0.34
IFT43-210ENST00000555370 TSPY10P0CW01 314 aa17.2■□□□□ 0.34
IFT43-210ENST00000555370 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
IFT43-210ENST00000555370 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
IFT43-210ENST00000555370 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
IFT43-210ENST00000555370 KDM5CP41229 1560 aa17.17■□□□□ 0.34
IFT43-210ENST00000555370 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
IFT43-210ENST00000555370 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
IFT43-210ENST00000555370 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
IFT43-210ENST00000555370 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
IFT43-210ENST00000555370 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
IFT43-210ENST00000555370 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
IFT43-210ENST00000555370 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
IFT43-210ENST00000555370 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
IFT43-210ENST00000555370 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
IFT43-210ENST00000555370 UNC13BO14795 1591 aa17.11■□□□□ 0.33
IFT43-210ENST00000555370 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
IFT43-210ENST00000555370 NPATQ14207 1427 aa17.1■□□□□ 0.33
IFT43-210ENST00000555370 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
IFT43-210ENST00000555370 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
IFT43-210ENST00000555370 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.32
IFT43-210ENST00000555370 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
IFT43-210ENST00000555370 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
IFT43-210ENST00000555370 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
IFT43-210ENST00000555370 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
IFT43-210ENST00000555370 MLH3Q9UHC1 1453 aa17.06■□□□□ 0.32
IFT43-210ENST00000555370 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
IFT43-210ENST00000555370 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
IFT43-210ENST00000555370 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
IFT43-210ENST00000555370 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
IFT43-210ENST00000555370 PZPP20742 1482 aa17.03■□□□□ 0.32
IFT43-210ENST00000555370 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
IFT43-210ENST00000555370 AGLP35573 1532 aa17.01■□□□□ 0.31
IFT43-210ENST00000555370 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
IFT43-210ENST00000555370 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
IFT43-210ENST00000555370 ZMYM3Q14202 1370 aa17■□□□□ 0.31
IFT43-210ENST00000555370 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
IFT43-210ENST00000555370 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
IFT43-210ENST00000555370 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
IFT43-210ENST00000555370 A2MP01023 1474 aa16.98■□□□□ 0.31
IFT43-210ENST00000555370 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
IFT43-210ENST00000555370 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
IFT43-210ENST00000555370 DHX29Q7Z478 1369 aaKnown RBP16.96■□□□□ 0.31
IFT43-210ENST00000555370 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.3
IFT43-210ENST00000555370 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.3
IFT43-210ENST00000555370 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
IFT43-210ENST00000555370 NUP155O75694 1391 aa16.95■□□□□ 0.3
IFT43-210ENST00000555370 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
IFT43-210ENST00000555370 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
IFT43-210ENST00000555370 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
IFT43-210ENST00000555370 TET3O43151 1660 aa16.94■□□□□ 0.3
IFT43-210ENST00000555370 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
IFT43-210ENST00000555370 CEP152O94986 1710 aa16.93■□□□□ 0.3
IFT43-210ENST00000555370 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
IFT43-210ENST00000555370 E9PCH4 1651 aa16.9■□□□□ 0.3
IFT43-210ENST00000555370 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.3
IFT43-210ENST00000555370 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
IFT43-210ENST00000555370 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
IFT43-210ENST00000555370 RXRBP28702 533 aa16.88■□□□□ 0.29
IFT43-210ENST00000555370 ZNF772Q68DY9 489 aaPredicted RBP16.88■□□□□ 0.29
IFT43-210ENST00000555370 FOXD1Q16676 465 aa16.87■□□□□ 0.29
IFT43-210ENST00000555370 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
IFT43-210ENST00000555370 SPHKAPQ2M3C7 1700 aa16.87■□□□□ 0.29
IFT43-210ENST00000555370 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
IFT43-210ENST00000555370 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
IFT43-210ENST00000555370 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
IFT43-210ENST00000555370 KANK1Q14678 1352 aa16.86■□□□□ 0.29
IFT43-210ENST00000555370 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
IFT43-210ENST00000555370 KIF3BO15066 747 aa16.85■□□□□ 0.29
IFT43-210ENST00000555370 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
IFT43-210ENST00000555370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
IFT43-210ENST00000555370 LMTK2Q8IWU2 1503 aa16.84■□□□□ 0.29
IFT43-210ENST00000555370 EFCAB6Q5THR3 1501 aa16.83■□□□□ 0.28
IFT43-210ENST00000555370 RPRD2Q5VT52 1461 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms