RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 L3MBTL2Q969R5 705 aa33.14■■■□□ 2.9
STRN3-207ENST00000555358 MYT1LQ9UL68 1186 aa33.12■■■□□ 2.89
STRN3-207ENST00000555358 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
STRN3-207ENST00000555358 BCANQ96GW7 911 aa33.1■■■□□ 2.89
STRN3-207ENST00000555358 ZNF518AQ6AHZ1 1483 aa33.09■■■□□ 2.89
STRN3-207ENST00000555358 TEX14Q8IWB6 1497 aa33.09■■■□□ 2.89
STRN3-207ENST00000555358 IQGAP3Q86VI3 1631 aa33.09■■■□□ 2.89
STRN3-207ENST00000555358 MAGI2Q86UL8 1455 aa33.08■■■□□ 2.89
STRN3-207ENST00000555358 KIDINS220Q9ULH0 1771 aa33.08■■■□□ 2.89
STRN3-207ENST00000555358 GLI2P10070 1586 aa33.05■■■□□ 2.88
STRN3-207ENST00000555358 POGZQ7Z3K3 1410 aa33.05■■■□□ 2.88
STRN3-207ENST00000555358 NEO1Q92859 1461 aa33.03■■■□□ 2.88
STRN3-207ENST00000555358 DIP2BQ9P265 1576 aa33.02■■■□□ 2.88
STRN3-207ENST00000555358 KDM5CP41229 1560 aa33.01■■■□□ 2.88
STRN3-207ENST00000555358 FAM69CQ0P6D2 419 aa33■■■□□ 2.87
STRN3-207ENST00000555358 DHX29Q7Z478 1369 aaKnown RBP32.97■■■□□ 2.87
STRN3-207ENST00000555358 RAPGEF3O95398 923 aa32.96■■■□□ 2.87
STRN3-207ENST00000555358 NEFLP07196 543 aa32.96■■■□□ 2.87
STRN3-207ENST00000555358 DEPDC5O75140 1603 aa32.95■■■□□ 2.87
STRN3-207ENST00000555358 HECW2Q9P2P5 1572 aa32.93■■■□□ 2.86
STRN3-207ENST00000555358 NBPF8Q3BBV2 869 aa32.93■■■□□ 2.86
STRN3-207ENST00000555358 KIF3BO15066 747 aa32.92■■■□□ 2.86
STRN3-207ENST00000555358 MLH3Q9UHC1 1453 aa32.92■■■□□ 2.86
STRN3-207ENST00000555358 PLA2R1Q13018 1463 aa32.92■■■□□ 2.86
STRN3-207ENST00000555358 TSPOAP1O95153 1857 aa32.91■■■□□ 2.86
STRN3-207ENST00000555358 EIF2AK4Q9P2K8 1649 aaKnown RBP32.9■■■□□ 2.86
STRN3-207ENST00000555358 RICTORQ6R327 1708 aa32.87■■■□□ 2.85
STRN3-207ENST00000555358 A2MP01023 1474 aa32.87■■■□□ 2.85
STRN3-207ENST00000555358 WASHC2AQ641Q2 1341 aa32.86■■■□□ 2.85
STRN3-207ENST00000555358 HSPA5P11021 654 aaKnown RBP32.86■■■□□ 2.85
STRN3-207ENST00000555358 ABCA6Q8N139 1617 aa32.85■■■□□ 2.85
STRN3-207ENST00000555358 MROH1Q8NDA8 1641 aa32.85■■■□□ 2.85
STRN3-207ENST00000555358 E9PCH4 1651 aa32.85■■■□□ 2.85
STRN3-207ENST00000555358 PPRC1Q5VV67 1664 aaKnown RBP32.84■■■□□ 2.85
STRN3-207ENST00000555358 CCDC144AA2RUR9 1427 aa32.83■■■□□ 2.85
STRN3-207ENST00000555358 FRMPD1Q5SYB0 1578 aa32.83■■■□□ 2.85
STRN3-207ENST00000555358 VWDEQ8N2E2 1590 aa32.82■■■□□ 2.84
STRN3-207ENST00000555358 PRDM15P57071 1507 aaPredicted RBP32.81■■■□□ 2.84
STRN3-207ENST00000555358 KIF13AQ9H1H9 1805 aa32.78■■■□□ 2.84
STRN3-207ENST00000555358 KANK1Q14678 1352 aa32.78■■■□□ 2.84
STRN3-207ENST00000555358 TET3O43151 1660 aa32.78■■■□□ 2.84
STRN3-207ENST00000555358 ATP10AO60312 1499 aa32.77■■■□□ 2.84
STRN3-207ENST00000555358 ZNF326Q5BKZ1 582 aaKnown RBP32.76■■■□□ 2.83
STRN3-207ENST00000555358 ANP32EQ9BTT0 268 aa32.75■■■□□ 2.83
STRN3-207ENST00000555358 EIF4G2P78344 907 aaKnown RBP eCLIP32.74■■■□□ 2.833e-6■■■■□ 25.5
STRN3-207ENST00000555358 DIP2CQ9Y2E4 1556 aa32.74■■■□□ 2.83
STRN3-207ENST00000555358 RNF17Q9BXT8 1623 aaKnown RBP32.73■■■□□ 2.83
STRN3-207ENST00000555358 CNTLNQ9NXG0 1405 aa32.72■■■□□ 2.83
STRN3-207ENST00000555358 HNRNPUQ00839 825 aaKnown RBP eCLIP32.71■■■□□ 2.83
STRN3-207ENST00000555358 KDM2AQ9Y2K7 1162 aa32.71■■■□□ 2.83
STRN3-207ENST00000555358 DCAF11Q8TEB1 546 aa32.7■■■□□ 2.83
STRN3-207ENST00000555358 YEATS2Q9ULM3 1422 aa32.7■■■□□ 2.83
STRN3-207ENST00000555358 SPHKAPQ2M3C7 1700 aa32.69■■■□□ 2.82
STRN3-207ENST00000555358 RGL3Q3MIN7 710 aa32.69■■■□□ 2.82
STRN3-207ENST00000555358 CEP152O94986 1710 aa32.69■■■□□ 2.82
STRN3-207ENST00000555358 UHRF1BP1Q6BDS2 1440 aa32.68■■■□□ 2.82
STRN3-207ENST00000555358 GGT6Q6P531 493 aa32.66■■■□□ 2.82
STRN3-207ENST00000555358 BCORL1Q5H9F3 1711 aa32.66■■■□□ 2.82
STRN3-207ENST00000555358 RBM19Q9Y4C8 960 aaKnown RBP32.65■■■□□ 2.82
STRN3-207ENST00000555358 TRPM2O94759 1503 aa32.65■■■□□ 2.82
STRN3-207ENST00000555358 PTPRTO14522 1441 aa32.64■■■□□ 2.82
STRN3-207ENST00000555358 EFCAB6Q5THR3 1501 aa32.62■■■□□ 2.81
STRN3-207ENST00000555358 ZMYM4Q5VZL5 1548 aa32.62■■■□□ 2.81
STRN3-207ENST00000555358 CCDC7Q96M83 1385 aa32.61■■■□□ 2.81
STRN3-207ENST00000555358 C11orf95C9JLR9 678 aaPredicted RBP32.61■■■□□ 2.81
STRN3-207ENST00000555358 LMTK2Q8IWU2 1503 aa32.59■■■□□ 2.81
STRN3-207ENST00000555358 CLTCL1P53675 1640 aa32.59■■■□□ 2.81
STRN3-207ENST00000555358 SPATA31E1Q6ZUB1 1445 aa32.57■■■□□ 2.8
STRN3-207ENST00000555358 RALGAPBQ86X10 1494 aa32.57■■■□□ 2.8
STRN3-207ENST00000555358 CCDC184Q52MB2 194 aa32.55■■■□□ 2.8
STRN3-207ENST00000555358 POLR1AO95602 1720 aaPredicted RBP32.55■■■□□ 2.8
STRN3-207ENST00000555358 CFAP65Q6ZU64 1925 aaKnown RBP32.54■■■□□ 2.8
STRN3-207ENST00000555358 COL17A1Q9UMD9 1497 aaPredicted RBP32.52■■■□□ 2.8
STRN3-207ENST00000555358 PRAG1Q86YV5 1406 aa32.52■■■□□ 2.8
STRN3-207ENST00000555358 PRKRIP1Q9H875 184 aaPredicted RBP32.52■■■□□ 2.8
STRN3-207ENST00000555358 UGGT1Q9NYU2 1555 aa32.51■■■□□ 2.8
STRN3-207ENST00000555358 ABCC3O15438 1527 aa32.51■■■□□ 2.8
STRN3-207ENST00000555358 WASHC2CQ9Y4E1 1318 aa32.5■■■□□ 2.79
STRN3-207ENST00000555358 USP47Q96K76 1375 aa32.49■■■□□ 2.79
STRN3-207ENST00000555358 NPATQ14207 1427 aa32.48■■■□□ 2.79
STRN3-207ENST00000555358 TRPM1Q7Z4N2 1603 aa32.47■■■□□ 2.79
STRN3-207ENST00000555358 CARD11Q9BXL7 1154 aa32.46■■■□□ 2.79
STRN3-207ENST00000555358 CAMSAP1Q5T5Y3 1602 aa32.44■■■□□ 2.78
STRN3-207ENST00000555358 IRX6P78412 446 aaPredicted RBP32.44■■■□□ 2.78
STRN3-207ENST00000555358 KIF7Q2M1P5 1343 aa32.42■■■□□ 2.78
STRN3-207ENST00000555358 ROCK2O75116 1388 aaKnown RBP32.41■■■□□ 2.78
STRN3-207ENST00000555358 ERICH6BQ5W0A0 696 aa32.41■■■□□ 2.78
STRN3-207ENST00000555358 NBPF1Q3BBV0 1214 aa32.39■■■□□ 2.78
STRN3-207ENST00000555358 KIF1BO60333 1816 aa32.38■■■□□ 2.77
STRN3-207ENST00000555358 SIGLEC1Q9BZZ2 1709 aa32.38■■■□□ 2.77
STRN3-207ENST00000555358 MRS2Q9HD23 443 aa32.36■■■□□ 2.77
STRN3-207ENST00000555358 ZC3H13Q5T200 1668 aaKnown RBP32.35■■■□□ 2.77
STRN3-207ENST00000555358 ZBED9Q6R2W3 1325 aa32.35■■■□□ 2.77
STRN3-207ENST00000555358 MROH2AA6NES4 1674 aa32.34■■■□□ 2.77
STRN3-207ENST00000555358 REREQ9P2R6 1566 aa32.34■■■□□ 2.77
STRN3-207ENST00000555358 FAM9BQ8IZU0 186 aa32.34■■■□□ 2.77
STRN3-207ENST00000555358 MADDQ8WXG6 1647 aa32.33■■■□□ 2.77
STRN3-207ENST00000555358 NEURL4Q96JN8 1562 aa32.31■■■□□ 2.76
STRN3-207ENST00000555358 ARHGEF40Q8TER5 1519 aa32.3■■■□□ 2.76
STRN3-207ENST00000555358 GPRASP1Q5JY77 1395 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms