RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
TMEM253-205ENST00000555314 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
TMEM253-205ENST00000555314 KIF3BO15066 747 aa20.07■□□□□ 0.8
TMEM253-205ENST00000555314 TNRQ92752 1358 aa20.07■□□□□ 0.8
TMEM253-205ENST00000555314 CCDC141Q6ZP82 1450 aa20.06■□□□□ 0.8
TMEM253-205ENST00000555314 PZPP20742 1482 aa20.05■□□□□ 0.8
TMEM253-205ENST00000555314 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
TMEM253-205ENST00000555314 THEMISQ8N1K5 641 aaPredicted RBP20.03■□□□□ 0.8
TMEM253-205ENST00000555314 KDM5DQ9BY66 1539 aa20.02■□□□□ 0.8
TMEM253-205ENST00000555314 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
TMEM253-205ENST00000555314 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.8
TMEM253-205ENST00000555314 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
TMEM253-205ENST00000555314 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
TMEM253-205ENST00000555314 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
TMEM253-205ENST00000555314 CPS1P31327 1500 aa20.01■□□□□ 0.79
TMEM253-205ENST00000555314 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
TMEM253-205ENST00000555314 TSPY4P0CV99 314 aa20■□□□□ 0.79
TMEM253-205ENST00000555314 TSPY10P0CW01 314 aa20■□□□□ 0.79
TMEM253-205ENST00000555314 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
TMEM253-205ENST00000555314 TOM1O60784 492 aa19.99■□□□□ 0.79
TMEM253-205ENST00000555314 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
TMEM253-205ENST00000555314 ARHGEF5Q12774 1597 aa19.96■□□□□ 0.79
TMEM253-205ENST00000555314 MED14O60244 1454 aa19.96■□□□□ 0.79
TMEM253-205ENST00000555314 FOXD1Q16676 465 aa19.95■□□□□ 0.78
TMEM253-205ENST00000555314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM253-205ENST00000555314 NEURL4Q96JN8 1562 aa19.94■□□□□ 0.78
TMEM253-205ENST00000555314 ADRA2BP18089 450 aa19.92■□□□□ 0.78
TMEM253-205ENST00000555314 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
TMEM253-205ENST00000555314 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
TMEM253-205ENST00000555314 HSPA1LP34931 641 aa19.9■□□□□ 0.78
TMEM253-205ENST00000555314 DEPDC5O75140 1603 aa19.9■□□□□ 0.78
TMEM253-205ENST00000555314 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
TMEM253-205ENST00000555314 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
TMEM253-205ENST00000555314 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
TMEM253-205ENST00000555314 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
TMEM253-205ENST00000555314 MAST1Q9Y2H9 1570 aa19.86■□□□□ 0.77
TMEM253-205ENST00000555314 ABCC3O15438 1527 aa19.86■□□□□ 0.77
TMEM253-205ENST00000555314 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
TMEM253-205ENST00000555314 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
TMEM253-205ENST00000555314 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
TMEM253-205ENST00000555314 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
TMEM253-205ENST00000555314 ERVK-7P63135 1459 aa19.82■□□□□ 0.76
TMEM253-205ENST00000555314 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
TMEM253-205ENST00000555314 ZC3H13Q5T200 1668 aaKnown RBP19.81■□□□□ 0.76
TMEM253-205ENST00000555314 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
TMEM253-205ENST00000555314 ARHGAP31Q2M1Z3 1444 aa19.8■□□□□ 0.76
TMEM253-205ENST00000555314 MED1Q15648 1581 aaPredicted RBP19.78■□□□□ 0.76
TMEM253-205ENST00000555314 LRRC7Q96NW7 1537 aa19.77■□□□□ 0.76
TMEM253-205ENST00000555314 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
TMEM253-205ENST00000555314 IQGAP1P46940 1657 aa19.76■□□□□ 0.75
TMEM253-205ENST00000555314 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
TMEM253-205ENST00000555314 ALKQ9UM73 1620 aa19.76■□□□□ 0.75
TMEM253-205ENST00000555314 SCAF11Q99590 1463 aaKnown RBP19.75■□□□□ 0.75
TMEM253-205ENST00000555314 MROH1Q8NDA8 1641 aa19.75■□□□□ 0.75
TMEM253-205ENST00000555314 ARHGAP23Q9P227 1491 aa19.74■□□□□ 0.75
TMEM253-205ENST00000555314 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
TMEM253-205ENST00000555314 KIF15Q9NS87 1388 aa19.73■□□□□ 0.75
TMEM253-205ENST00000555314 SLIT1O75093 1534 aa19.73■□□□□ 0.75
TMEM253-205ENST00000555314 SYNMO15061 1565 aa19.72■□□□□ 0.75
TMEM253-205ENST00000555314 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
TMEM253-205ENST00000555314 EID1Q9Y6B2 187 aa19.72■□□□□ 0.75
TMEM253-205ENST00000555314 LTKP29376 864 aa19.71■□□□□ 0.75
TMEM253-205ENST00000555314 PRDM15P57071 1507 aaPredicted RBP19.7■□□□□ 0.74
TMEM253-205ENST00000555314 ABCC5O15440 1437 aa19.68■□□□□ 0.74
TMEM253-205ENST00000555314 KANK1Q14678 1352 aa19.68■□□□□ 0.74
TMEM253-205ENST00000555314 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
TMEM253-205ENST00000555314 UBR1Q8IWV7 1749 aa19.66■□□□□ 0.74
TMEM253-205ENST00000555314 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
TMEM253-205ENST00000555314 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
TMEM253-205ENST00000555314 STRCP1A6NGW2 1772 aa19.63■□□□□ 0.73
TMEM253-205ENST00000555314 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
TMEM253-205ENST00000555314 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
TMEM253-205ENST00000555314 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
TMEM253-205ENST00000555314 APLP2Q06481 763 aa19.62■□□□□ 0.73
TMEM253-205ENST00000555314 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
TMEM253-205ENST00000555314 DAPK1P53355 1430 aa19.61■□□□□ 0.73
TMEM253-205ENST00000555314 KCNA6P17658 529 aa19.61■□□□□ 0.73
TMEM253-205ENST00000555314 CEP152O94986 1710 aa19.6■□□□□ 0.73
TMEM253-205ENST00000555314 IDI1Q13907 227 aa19.6■□□□□ 0.73
TMEM253-205ENST00000555314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
TMEM253-205ENST00000555314 SLC52A1Q9NWF4 448 aa19.59■□□□□ 0.73
TMEM253-205ENST00000555314 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
TMEM253-205ENST00000555314 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
TMEM253-205ENST00000555314 EFCAB6Q5THR3 1501 aa19.57■□□□□ 0.72
TMEM253-205ENST00000555314 NOS1P29475 1434 aa19.57■□□□□ 0.72
TMEM253-205ENST00000555314 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
TMEM253-205ENST00000555314 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
TMEM253-205ENST00000555314 CROCC2H7BZ55 1655 aa19.54■□□□□ 0.72
TMEM253-205ENST00000555314 PIK3C2BO00750 1634 aa19.54■□□□□ 0.72
TMEM253-205ENST00000555314 RGS17Q9UGC6 210 aaPredicted RBP19.53■□□□□ 0.72
TMEM253-205ENST00000555314 TET3O43151 1660 aa19.52■□□□□ 0.72
TMEM253-205ENST00000555314 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.72
TMEM253-205ENST00000555314 RPRD2Q5VT52 1461 aaKnown RBP19.52■□□□□ 0.72
TMEM253-205ENST00000555314 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
TMEM253-205ENST00000555314 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
TMEM253-205ENST00000555314 ADGRL2O95490 1459 aa19.5■□□□□ 0.71
TMEM253-205ENST00000555314 HDGFP51858 240 aaKnown RBP19.5■□□□□ 0.71
TMEM253-205ENST00000555314 SLC26A8Q96RN1 970 aa19.5■□□□□ 0.71
TMEM253-205ENST00000555314 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
TMEM253-205ENST00000555314 ADGRB3O60242 1522 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms