RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
CHD8-208ENST00000555301 KANK1Q14678 1352 aa21.34■■□□□ 1.01
CHD8-208ENST00000555301 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1.01
CHD8-208ENST00000555301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.016e-7■■□□□ 13
CHD8-208ENST00000555301 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
CHD8-208ENST00000555301 CNTLNQ9NXG0 1405 aa21.31■■□□□ 1
CHD8-208ENST00000555301 FAM135AQ9P2D6 1515 aa21.31■■□□□ 1
CHD8-208ENST00000555301 PRDM15P57071 1507 aaPredicted RBP21.3■■□□□ 1
CHD8-208ENST00000555301 DEPDC5O75140 1603 aa21.29■■□□□ 1
CHD8-208ENST00000555301 ADAMTSL3P82987 1691 aa21.29■■□□□ 1
CHD8-208ENST00000555301 KDM4FA0A1W2PPD8 638 aa21.29■■□□□ 1
CHD8-208ENST00000555301 HRCP23327 699 aa21.29■■□□□ 1
CHD8-208ENST00000555301 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
CHD8-208ENST00000555301 RAB3GAP2Q9H2M9 1393 aa21.28■■□□□ 1
CHD8-208ENST00000555301 KDM5DQ9BY66 1539 aa21.28■■□□□ 1
CHD8-208ENST00000555301 NUP155O75694 1391 aa21.27■■□□□ 1
CHD8-208ENST00000555301 UNC13BO14795 1591 aa21.27■□□□□ 0.99
CHD8-208ENST00000555301 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
CHD8-208ENST00000555301 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
CHD8-208ENST00000555301 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
CHD8-208ENST00000555301 VWDEQ8N2E2 1590 aa21.24■□□□□ 0.99
CHD8-208ENST00000555301 ABCC3O15438 1527 aa21.24■□□□□ 0.99
CHD8-208ENST00000555301 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
CHD8-208ENST00000555301 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
CHD8-208ENST00000555301 ZC3H13Q5T200 1668 aaKnown RBP21.21■□□□□ 0.99
CHD8-208ENST00000555301 FER1L4A9Z1Z3 1794 aa21.21■□□□□ 0.99
CHD8-208ENST00000555301 PTPRMP28827 1452 aa21.2■□□□□ 0.98
CHD8-208ENST00000555301 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
CHD8-208ENST00000555301 IQGAP3Q86VI3 1631 aa21.18■□□□□ 0.98
CHD8-208ENST00000555301 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
CHD8-208ENST00000555301 RIMS1Q86UR5 1692 aaKnown RBP21.17■□□□□ 0.98
CHD8-208ENST00000555301 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
CHD8-208ENST00000555301 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
CHD8-208ENST00000555301 PZPP20742 1482 aa21.14■□□□□ 0.98
CHD8-208ENST00000555301 CEBPAP49715 358 aaPredicted RBP21.14■□□□□ 0.97
CHD8-208ENST00000555301 EFCAB6Q5THR3 1501 aa21.14■□□□□ 0.97
CHD8-208ENST00000555301 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
CHD8-208ENST00000555301 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
CHD8-208ENST00000555301 NPATQ14207 1427 aa21.12■□□□□ 0.97
CHD8-208ENST00000555301 CEP152O94986 1710 aa21.12■□□□□ 0.97
CHD8-208ENST00000555301 CAMSAP1Q5T5Y3 1602 aa21.12■□□□□ 0.97
CHD8-208ENST00000555301 RPRD2Q5VT52 1461 aaKnown RBP21.12■□□□□ 0.97
CHD8-208ENST00000555301 TET3O43151 1660 aa21.12■□□□□ 0.97
CHD8-208ENST00000555301 PKD2Q13563 968 aa21.1■□□□□ 0.97
CHD8-208ENST00000555301 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.97
CHD8-208ENST00000555301 C3P01024 1663 aa21.08■□□□□ 0.96
CHD8-208ENST00000555301 ERVK-7P63135 1459 aa21.06■□□□□ 0.96
CHD8-208ENST00000555301 TNRQ92752 1358 aa21.04■□□□□ 0.96
CHD8-208ENST00000555301 SPATA31D1Q6ZQQ2 1576 aa21.04■□□□□ 0.96
CHD8-208ENST00000555301 NOS1P29475 1434 aa21.04■□□□□ 0.96
CHD8-208ENST00000555301 E9PCH4 1651 aa21.02■□□□□ 0.95
CHD8-208ENST00000555301 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
CHD8-208ENST00000555301 PTPRTO14522 1441 aa21■□□□□ 0.95
CHD8-208ENST00000555301 FOXD1Q16676 465 aa20.99■□□□□ 0.95
CHD8-208ENST00000555301 SLC52A1Q9NWF4 448 aa20.99■□□□□ 0.95
CHD8-208ENST00000555301 PREX1Q8TCU6 1659 aa20.99■□□□□ 0.95
CHD8-208ENST00000555301 NLRP1Q9C000 1473 aa20.97■□□□□ 0.95
CHD8-208ENST00000555301 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
CHD8-208ENST00000555301 DHX57Q6P158 1386 aaKnown RBP20.96■□□□□ 0.95
CHD8-208ENST00000555301 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
CHD8-208ENST00000555301 TRPM2O94759 1503 aa20.94■□□□□ 0.94
CHD8-208ENST00000555301 SYNMO15061 1565 aa20.93■□□□□ 0.94
CHD8-208ENST00000555301 IDI1Q13907 227 aa20.93■□□□□ 0.94
CHD8-208ENST00000555301 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
CHD8-208ENST00000555301 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
CHD8-208ENST00000555301 MYO3AQ8NEV4 1616 aa20.9■□□□□ 0.94
CHD8-208ENST00000555301 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
CHD8-208ENST00000555301 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
CHD8-208ENST00000555301 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.93
CHD8-208ENST00000555301 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
CHD8-208ENST00000555301 THEMISQ8N1K5 641 aaPredicted RBP20.87■□□□□ 0.93
CHD8-208ENST00000555301 UGGT1Q9NYU2 1555 aa20.87■□□□□ 0.93
CHD8-208ENST00000555301 CEP170BQ9Y4F5 1589 aaPredicted RBP20.87■□□□□ 0.93
CHD8-208ENST00000555301 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
CHD8-208ENST00000555301 LMTK3Q96Q04 1460 aa20.86■□□□□ 0.93
CHD8-208ENST00000555301 CFAP65Q6ZU64 1925 aaKnown RBP20.85■□□□□ 0.93
CHD8-208ENST00000555301 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
CHD8-208ENST00000555301 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.93
CHD8-208ENST00000555301 ADGRB3O60242 1522 aa20.83■□□□□ 0.92
CHD8-208ENST00000555301 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
CHD8-208ENST00000555301 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
CHD8-208ENST00000555301 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
CHD8-208ENST00000555301 HSPA2P54652 639 aa20.78■□□□□ 0.92
CHD8-208ENST00000555301 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
CHD8-208ENST00000555301 TMEM2Q9UHN6 1383 aa20.77■□□□□ 0.92
CHD8-208ENST00000555301 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
CHD8-208ENST00000555301 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
CHD8-208ENST00000555301 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
CHD8-208ENST00000555301 UBR1Q8IWV7 1749 aa20.76■□□□□ 0.91
CHD8-208ENST00000555301 SPATA31E1Q6ZUB1 1445 aa20.75■□□□□ 0.91
CHD8-208ENST00000555301 NEURL4Q96JN8 1562 aa20.75■□□□□ 0.91
CHD8-208ENST00000555301 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
CHD8-208ENST00000555301 EID1Q9Y6B2 187 aa20.74■□□□□ 0.91
CHD8-208ENST00000555301 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
CHD8-208ENST00000555301 RPGRIP1LQ68CZ1 1315 aa20.74■□□□□ 0.91
CHD8-208ENST00000555301 SLIT1O75093 1534 aa20.73■□□□□ 0.91
CHD8-208ENST00000555301 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
CHD8-208ENST00000555301 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHD8-208ENST00000555301 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
CHD8-208ENST00000555301 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms