RNA–Protein interactions for RNA: ENST00000555110.1

PRKCH-212, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-212ENST00000555110 PLEKHH2Q8IVE3 1493 aa6.25□□□□□ -1.41
PRKCH-212ENST00000555110 SHANK2Q9UPX8 1470 aa6.25□□□□□ -1.41
PRKCH-212ENST00000555110 SPAG9O60271 1321 aaKnown RBP6.25□□□□□ -1.41
PRKCH-212ENST00000555110 SCAF1Q9H7N4 1312 aaKnown RBP6.25□□□□□ -1.41
PRKCH-212ENST00000555110 A2MP01023 1474 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 PIP4K2BP78356 416 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 ATP1B4Q9UN42 357 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-212ENST00000555110 CDC42BPBQ9Y5S2 1711 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 ATP7AQ04656 1500 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 SYCP2Q9BX26 1530 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 CASKIN1Q8WXD9 1431 aa6.24□□□□□ -1.41
PRKCH-212ENST00000555110 INO80Q9ULG1 1556 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-212ENST00000555110 VSIG10Q8N0Z9 540 aa6.23□□□□□ -1.41
PRKCH-212ENST00000555110 NEURL4Q96JN8 1562 aa6.23□□□□□ -1.41
PRKCH-212ENST00000555110 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
PRKCH-212ENST00000555110 TNRQ92752 1358 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 FOXD4L1Q9NU39 408 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 VWDEQ8N2E2 1590 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 MED14O60244 1454 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 PZPP20742 1482 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 NLRP1Q9C000 1473 aa6.22□□□□□ -1.41
PRKCH-212ENST00000555110 GPATCH8Q9UKJ3 1502 aaKnown RBP6.21□□□□□ -1.42
PRKCH-212ENST00000555110 FYCO1Q9BQS8 1478 aa6.21□□□□□ -1.42
PRKCH-212ENST00000555110 RNF17Q9BXT8 1623 aaKnown RBP6.21□□□□□ -1.42
PRKCH-212ENST00000555110 ALKQ9UM73 1620 aa6.21□□□□□ -1.42
PRKCH-212ENST00000555110 CLTCQ00610 1675 aaKnown RBP6.2□□□□□ -1.42
PRKCH-212ENST00000555110 SYNMO15061 1565 aa6.2□□□□□ -1.42
PRKCH-212ENST00000555110 NPHP4O75161 1426 aaPredicted RBP6.2□□□□□ -1.42
PRKCH-212ENST00000555110 ANKLE2Q86XL3 938 aa6.2□□□□□ -1.42
PRKCH-212ENST00000555110 DEPDC5O75140 1603 aa6.2□□□□□ -1.42
PRKCH-212ENST00000555110 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
PRKCH-212ENST00000555110 RTEL1-TNFRSF6BF6WH68 1400 aa6.19□□□□□ -1.42
PRKCH-212ENST00000555110 UBTFP17480 764 aaKnown RBP6.19□□□□□ -1.42
PRKCH-212ENST00000555110 GGT6Q6P531 493 aa6.19□□□□□ -1.42
PRKCH-212ENST00000555110 THEMISQ8N1K5 641 aaPredicted RBP6.19□□□□□ -1.42
PRKCH-212ENST00000555110 POLR1AO95602 1720 aaPredicted RBP6.19□□□□□ -1.42
PRKCH-212ENST00000555110 CDC42BPAQ5VT25 1732 aa6.19□□□□□ -1.42
PRKCH-212ENST00000555110 DHX29Q7Z478 1369 aaKnown RBP6.18□□□□□ -1.42
PRKCH-212ENST00000555110 CFDP1Q9UEE9 299 aaPredicted RBP6.18□□□□□ -1.42
PRKCH-212ENST00000555110 ZNF777Q9ULD5 760 aaPredicted RBP6.18□□□□□ -1.42
PRKCH-212ENST00000555110 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
PRKCH-212ENST00000555110 LRRC7Q96NW7 1537 aa6.18□□□□□ -1.42
PRKCH-212ENST00000555110 CCNB3Q8WWL7 1395 aa6.18□□□□□ -1.42
PRKCH-212ENST00000555110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
PRKCH-212ENST00000555110 MIA2Q96PC5 1412 aa6.17□□□□□ -1.42
PRKCH-212ENST00000555110 ADGBQ8N7X0 1667 aa6.17□□□□□ -1.42
PRKCH-212ENST00000555110 HNRNPMP52272 730 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRKCH-212ENST00000555110 PODXL2Q9NZ53 605 aa6.17□□□□□ -1.42
PRKCH-212ENST00000555110 RGS17Q9UGC6 210 aaPredicted RBP6.17□□□□□ -1.42
PRKCH-212ENST00000555110 UGGT1Q9NYU2 1555 aa6.17□□□□□ -1.42
PRKCH-212ENST00000555110 LRRIQ1Q96JM4 1722 aa6.16□□□□□ -1.42
PRKCH-212ENST00000555110 MBD5Q9P267 1494 aa6.16□□□□□ -1.42
PRKCH-212ENST00000555110 KLHL34Q8N239 644 aa6.16□□□□□ -1.42
PRKCH-212ENST00000555110 IQGAP1P46940 1657 aa6.16□□□□□ -1.42
PRKCH-212ENST00000555110 TMEM132AQ24JP5 1023 aa6.15□□□□□ -1.42
PRKCH-212ENST00000555110 FBXO31Q5XUX0 539 aaPredicted RBP6.15□□□□□ -1.42
PRKCH-212ENST00000555110 WASHC2CQ9Y4E1 1318 aa6.15□□□□□ -1.43
PRKCH-212ENST00000555110 FAM135BQ49AJ0 1406 aa6.15□□□□□ -1.43
PRKCH-212ENST00000555110 CCDC141Q6ZP82 1450 aa6.15□□□□□ -1.43
PRKCH-212ENST00000555110 EP400Q96L91 3159 aa6.14□□□□□ -1.43
PRKCH-212ENST00000555110 SCAF11Q99590 1463 aaKnown RBP6.14□□□□□ -1.43
PRKCH-212ENST00000555110 KIF3BO15066 747 aa6.13□□□□□ -1.43
PRKCH-212ENST00000555110 APLP2Q06481 763 aa6.13□□□□□ -1.43
PRKCH-212ENST00000555110 MTUS2Q5JR59 1369 aa6.13□□□□□ -1.43
PRKCH-212ENST00000555110 CEP162Q5TB80 1403 aa6.13□□□□□ -1.43
PRKCH-212ENST00000555110 LRRC9Q6ZRR7 1453 aa6.13□□□□□ -1.43
PRKCH-212ENST00000555110 ABCC3O15438 1527 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 ERVK-7P63135 1459 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 TIAM1Q13009 1591 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 RSPH4AQ5TD94 716 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 EHBP1L1Q8N3D4 1523 aa6.12□□□□□ -1.43
PRKCH-212ENST00000555110 SLIT1O75093 1534 aa6.11□□□□□ -1.43
PRKCH-212ENST00000555110 CAMSAP2Q08AD1 1489 aa6.11□□□□□ -1.43
PRKCH-212ENST00000555110 ARHGAP23Q9P227 1491 aa6.11□□□□□ -1.43
PRKCH-212ENST00000555110 ZC3H13Q5T200 1668 aaKnown RBP6.1□□□□□ -1.43
PRKCH-212ENST00000555110 ZNF644Q9H582 1327 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-212ENST00000555110 STRCP1A6NGW2 1772 aa6.1□□□□□ -1.43
PRKCH-212ENST00000555110 NCOA2Q15596 1464 aa6.09□□□□□ -1.43
PRKCH-212ENST00000555110 JCADQ9P266 1359 aa6.09□□□□□ -1.43
PRKCH-212ENST00000555110 ARHGEF5Q12774 1597 aa6.09□□□□□ -1.43
PRKCH-212ENST00000555110 NKTRP30414 1462 aaKnown RBP6.09□□□□□ -1.44
PRKCH-212ENST00000555110 ARHGAP31Q2M1Z3 1444 aa6.08□□□□□ -1.44
PRKCH-212ENST00000555110 TMEM94Q12767 1356 aa6.08□□□□□ -1.44
PRKCH-212ENST00000555110 C14orf37Q86TY3 774 aa6.08□□□□□ -1.44
PRKCH-212ENST00000555110 EID1Q9Y6B2 187 aa6.08□□□□□ -1.44
PRKCH-212ENST00000555110 MAP3K1Q13233 1512 aa6.08□□□□□ -1.44
PRKCH-212ENST00000555110 TMEM2Q9UHN6 1383 aa6.07□□□□□ -1.44
PRKCH-212ENST00000555110 EIF2AK4Q9P2K8 1649 aaKnown RBP6.07□□□□□ -1.44
PRKCH-212ENST00000555110 TSPY4P0CV99 314 aa6.07□□□□□ -1.44
PRKCH-212ENST00000555110 TSPY10P0CW01 314 aa6.07□□□□□ -1.44
PRKCH-212ENST00000555110 LTKP29376 864 aa6.07□□□□□ -1.44
PRKCH-212ENST00000555110 PRDM15P57071 1507 aaPredicted RBP6.07□□□□□ -1.44
PRKCH-212ENST00000555110 FGD6Q6ZV73 1430 aa6.07□□□□□ -1.44
PRKCH-212ENST00000555110 SPATA31A6Q5VVP1 1343 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 UBR1Q8IWV7 1749 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 KCNA6P17658 529 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 ZNF772Q68DY9 489 aaPredicted RBP6.06□□□□□ -1.44
PRKCH-212ENST00000555110 TXNDC2Q86VQ3 553 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 UPF1Q92900 1129 aaKnown RBP eCLIP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms