RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 DUOX2Q9NRD8 1548 aa13.99□□□□□ -0.17
PRKCH-211ENST00000555082 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
PRKCH-211ENST00000555082 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
PRKCH-211ENST00000555082 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
PRKCH-211ENST00000555082 YEATS2Q9ULM3 1422 aa13.97□□□□□ -0.17
PRKCH-211ENST00000555082 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
PRKCH-211ENST00000555082 ERBINQ96RT1 1412 aa13.96□□□□□ -0.17
PRKCH-211ENST00000555082 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
PRKCH-211ENST00000555082 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.17
PRKCH-211ENST00000555082 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.17
PRKCH-211ENST00000555082 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.18
PRKCH-211ENST00000555082 PPRC1Q5VV67 1664 aaKnown RBP13.96□□□□□ -0.18
PRKCH-211ENST00000555082 GGT6Q6P531 493 aa13.95□□□□□ -0.18
PRKCH-211ENST00000555082 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
PRKCH-211ENST00000555082 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
PRKCH-211ENST00000555082 KDM5CP41229 1560 aa13.94□□□□□ -0.18
PRKCH-211ENST00000555082 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
PRKCH-211ENST00000555082 L3MBTL2Q969R5 705 aa13.94□□□□□ -0.18
PRKCH-211ENST00000555082 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
PRKCH-211ENST00000555082 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
PRKCH-211ENST00000555082 A2MP01023 1474 aa13.93□□□□□ -0.18
PRKCH-211ENST00000555082 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
PRKCH-211ENST00000555082 TEX14Q8IWB6 1497 aa13.91□□□□□ -0.18
PRKCH-211ENST00000555082 KDM5DQ9BY66 1539 aa13.91□□□□□ -0.18
PRKCH-211ENST00000555082 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
PRKCH-211ENST00000555082 ABCA6Q8N139 1617 aa13.9□□□□□ -0.18
PRKCH-211ENST00000555082 UNC13BO14795 1591 aa13.9□□□□□ -0.18
PRKCH-211ENST00000555082 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
PRKCH-211ENST00000555082 RPRD2Q5VT52 1461 aaKnown RBP13.88□□□□□ -0.19
PRKCH-211ENST00000555082 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
PRKCH-211ENST00000555082 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
PRKCH-211ENST00000555082 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
PRKCH-211ENST00000555082 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
PRKCH-211ENST00000555082 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
PRKCH-211ENST00000555082 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
PRKCH-211ENST00000555082 DIP2CQ9Y2E4 1556 aa13.86□□□□□ -0.19
PRKCH-211ENST00000555082 MLECQ14165 292 aa13.86□□□□□ -0.19
PRKCH-211ENST00000555082 NEFLP07196 543 aa13.85□□□□□ -0.19
PRKCH-211ENST00000555082 NBPF8Q3BBV2 869 aa13.85□□□□□ -0.19
PRKCH-211ENST00000555082 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
PRKCH-211ENST00000555082 IQGAP3Q86VI3 1631 aa13.85□□□□□ -0.19
PRKCH-211ENST00000555082 KANK1Q14678 1352 aa13.85□□□□□ -0.19
PRKCH-211ENST00000555082 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
PRKCH-211ENST00000555082 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.19
PRKCH-211ENST00000555082 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
PRKCH-211ENST00000555082 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
PRKCH-211ENST00000555082 DEPDC5O75140 1603 aa13.8□□□□□ -0.2
PRKCH-211ENST00000555082 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
PRKCH-211ENST00000555082 ATP10AO60312 1499 aa13.79□□□□□ -0.2
PRKCH-211ENST00000555082 ZMYM4Q5VZL5 1548 aa13.79□□□□□ -0.2
PRKCH-211ENST00000555082 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
PRKCH-211ENST00000555082 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
PRKCH-211ENST00000555082 E9PCH4 1651 aa13.78□□□□□ -0.2
PRKCH-211ENST00000555082 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-211ENST00000555082 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-211ENST00000555082 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.21
PRKCH-211ENST00000555082 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
PRKCH-211ENST00000555082 NPATQ14207 1427 aa13.76□□□□□ -0.21
PRKCH-211ENST00000555082 CEP152O94986 1710 aa13.75□□□□□ -0.21
PRKCH-211ENST00000555082 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
PRKCH-211ENST00000555082 MSH5O43196 834 aa13.75□□□□□ -0.21
PRKCH-211ENST00000555082 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
PRKCH-211ENST00000555082 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
PRKCH-211ENST00000555082 ABCC3O15438 1527 aa13.74□□□□□ -0.21
PRKCH-211ENST00000555082 TET3O43151 1660 aa13.74□□□□□ -0.21
PRKCH-211ENST00000555082 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
PRKCH-211ENST00000555082 ANP32CO43423 234 aa13.74□□□□□ -0.21
PRKCH-211ENST00000555082 PTPRTO14522 1441 aa13.73□□□□□ -0.21
PRKCH-211ENST00000555082 EFCAB6Q5THR3 1501 aa13.73□□□□□ -0.21
PRKCH-211ENST00000555082 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
PRKCH-211ENST00000555082 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
PRKCH-211ENST00000555082 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
PRKCH-211ENST00000555082 LMTK2Q8IWU2 1503 aa13.7□□□□□ -0.22
PRKCH-211ENST00000555082 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
PRKCH-211ENST00000555082 CLTCL1P53675 1640 aa13.7□□□□□ -0.22
PRKCH-211ENST00000555082 TRPM2O94759 1503 aa13.69□□□□□ -0.22
PRKCH-211ENST00000555082 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
PRKCH-211ENST00000555082 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
PRKCH-211ENST00000555082 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
PRKCH-211ENST00000555082 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
PRKCH-211ENST00000555082 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
PRKCH-211ENST00000555082 IDI1Q13907 227 aa13.67□□□□□ -0.22
PRKCH-211ENST00000555082 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
PRKCH-211ENST00000555082 AGLP35573 1532 aa13.66□□□□□ -0.22
PRKCH-211ENST00000555082 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
PRKCH-211ENST00000555082 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
PRKCH-211ENST00000555082 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
PRKCH-211ENST00000555082 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
PRKCH-211ENST00000555082 CEBPAP49715 358 aaPredicted RBP13.65□□□□□ -0.22
PRKCH-211ENST00000555082 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCH-211ENST00000555082 C11orf95C9JLR9 678 aaPredicted RBP13.64□□□□□ -0.23
PRKCH-211ENST00000555082 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
PRKCH-211ENST00000555082 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
PRKCH-211ENST00000555082 NOS1P29475 1434 aa13.63□□□□□ -0.23
PRKCH-211ENST00000555082 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
PRKCH-211ENST00000555082 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
PRKCH-211ENST00000555082 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
PRKCH-211ENST00000555082 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
PRKCH-211ENST00000555082 CNTLNQ9NXG0 1405 aa13.62□□□□□ -0.23
PRKCH-211ENST00000555082 SYNMO15061 1565 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms