RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
ACTN1-214ENST00000555075 KANK1Q14678 1352 aa18.12■□□□□ 0.49
ACTN1-214ENST00000555075 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
ACTN1-214ENST00000555075 ADGRL2O95490 1459 aa18.12■□□□□ 0.49
ACTN1-214ENST00000555075 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-214ENST00000555075 CNTLNQ9NXG0 1405 aa18.1■□□□□ 0.49
ACTN1-214ENST00000555075 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
ACTN1-214ENST00000555075 HSPA2P54652 639 aa18.1■□□□□ 0.49
ACTN1-214ENST00000555075 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
ACTN1-214ENST00000555075 ANKRD50Q9ULJ7 1429 aa18.09■□□□□ 0.49
ACTN1-214ENST00000555075 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
ACTN1-214ENST00000555075 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
ACTN1-214ENST00000555075 C3P01024 1663 aa18.06■□□□□ 0.48
ACTN1-214ENST00000555075 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
ACTN1-214ENST00000555075 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
ACTN1-214ENST00000555075 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
ACTN1-214ENST00000555075 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
ACTN1-214ENST00000555075 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
ACTN1-214ENST00000555075 FAM135AQ9P2D6 1515 aa17.99■□□□□ 0.47
ACTN1-214ENST00000555075 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
ACTN1-214ENST00000555075 MROH2AA6NES4 1674 aa17.98■□□□□ 0.47
ACTN1-214ENST00000555075 NUP155O75694 1391 aa17.96■□□□□ 0.47
ACTN1-214ENST00000555075 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
ACTN1-214ENST00000555075 NAIPQ13075 1403 aa17.95■□□□□ 0.46
ACTN1-214ENST00000555075 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
ACTN1-214ENST00000555075 ABCC3O15438 1527 aa17.93■□□□□ 0.46
ACTN1-214ENST00000555075 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
ACTN1-214ENST00000555075 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
ACTN1-214ENST00000555075 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
ACTN1-214ENST00000555075 FBXO41Q8TF61 875 aa17.91■□□□□ 0.46
ACTN1-214ENST00000555075 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
ACTN1-214ENST00000555075 NPATQ14207 1427 aa17.9■□□□□ 0.46
ACTN1-214ENST00000555075 SETD5Q9C0A6 1442 aa17.9■□□□□ 0.46
ACTN1-214ENST00000555075 STRCQ7RTU9 1775 aa17.9■□□□□ 0.46
ACTN1-214ENST00000555075 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
ACTN1-214ENST00000555075 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
ACTN1-214ENST00000555075 FBXO31Q5XUX0 539 aaPredicted RBP17.89■□□□□ 0.45
ACTN1-214ENST00000555075 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
ACTN1-214ENST00000555075 CEP152O94986 1710 aa17.89■□□□□ 0.45
ACTN1-214ENST00000555075 PZPP20742 1482 aa17.88■□□□□ 0.45
ACTN1-214ENST00000555075 TNRQ92752 1358 aa17.88■□□□□ 0.45
ACTN1-214ENST00000555075 UNC13BO14795 1591 aa17.87■□□□□ 0.45
ACTN1-214ENST00000555075 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
ACTN1-214ENST00000555075 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
ACTN1-214ENST00000555075 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
ACTN1-214ENST00000555075 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
ACTN1-214ENST00000555075 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
ACTN1-214ENST00000555075 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
ACTN1-214ENST00000555075 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.45
ACTN1-214ENST00000555075 VWDEQ8N2E2 1590 aa17.83■□□□□ 0.44
ACTN1-214ENST00000555075 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
ACTN1-214ENST00000555075 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-214ENST00000555075 IQGAP3Q86VI3 1631 aa17.81■□□□□ 0.44
ACTN1-214ENST00000555075 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
ACTN1-214ENST00000555075 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-214ENST00000555075 EFCAB6Q5THR3 1501 aa17.81■□□□□ 0.44
ACTN1-214ENST00000555075 ERVK-7P63135 1459 aa17.81■□□□□ 0.44
ACTN1-214ENST00000555075 TET3O43151 1660 aa17.8■□□□□ 0.44
ACTN1-214ENST00000555075 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
ACTN1-214ENST00000555075 PTPRTO14522 1441 aa17.8■□□□□ 0.44
ACTN1-214ENST00000555075 PKD2Q13563 968 aa17.79■□□□□ 0.44
ACTN1-214ENST00000555075 CHGAP10645 457 aaKnown RBP17.78■□□□□ 0.44
ACTN1-214ENST00000555075 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
ACTN1-214ENST00000555075 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
ACTN1-214ENST00000555075 SPATA31D1Q6ZQQ2 1576 aa17.76■□□□□ 0.43
ACTN1-214ENST00000555075 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
ACTN1-214ENST00000555075 SLC52A1Q9NWF4 448 aa17.76■□□□□ 0.43
ACTN1-214ENST00000555075 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
ACTN1-214ENST00000555075 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
ACTN1-214ENST00000555075 HRCP23327 699 aa17.74■□□□□ 0.43
ACTN1-214ENST00000555075 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
ACTN1-214ENST00000555075 NCKAP5LQ9HCH0 1330 aa17.73■□□□□ 0.43
ACTN1-214ENST00000555075 UGGT1Q9NYU2 1555 aa17.71■□□□□ 0.43
ACTN1-214ENST00000555075 IDI1Q13907 227 aa17.71■□□□□ 0.43
ACTN1-214ENST00000555075 E9PCH4 1651 aa17.71■□□□□ 0.42
ACTN1-214ENST00000555075 NOS1P29475 1434 aa17.7■□□□□ 0.42
ACTN1-214ENST00000555075 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
ACTN1-214ENST00000555075 HDGFP51858 240 aaKnown RBP17.69■□□□□ 0.42
ACTN1-214ENST00000555075 FOXD1Q16676 465 aa17.69■□□□□ 0.42
ACTN1-214ENST00000555075 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
ACTN1-214ENST00000555075 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
ACTN1-214ENST00000555075 EID1Q9Y6B2 187 aa17.69■□□□□ 0.42
ACTN1-214ENST00000555075 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
ACTN1-214ENST00000555075 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-214ENST00000555075 BCANQ96GW7 911 aa17.67■□□□□ 0.42
ACTN1-214ENST00000555075 SYNMO15061 1565 aa17.66■□□□□ 0.42
ACTN1-214ENST00000555075 POLR1AO95602 1720 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-214ENST00000555075 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.41
ACTN1-214ENST00000555075 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
ACTN1-214ENST00000555075 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
ACTN1-214ENST00000555075 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-214ENST00000555075 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
ACTN1-214ENST00000555075 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
ACTN1-214ENST00000555075 ADGRB3O60242 1522 aa17.61■□□□□ 0.41
ACTN1-214ENST00000555075 TRPM2O94759 1503 aa17.61■□□□□ 0.41
ACTN1-214ENST00000555075 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
ACTN1-214ENST00000555075 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
ACTN1-214ENST00000555075 TMEM2Q9UHN6 1383 aa17.59■□□□□ 0.41
ACTN1-214ENST00000555075 UBR1Q8IWV7 1749 aa17.58■□□□□ 0.4
ACTN1-214ENST00000555075 RGL3Q3MIN7 710 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms