RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
FOXN3-208ENST00000555034 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
FOXN3-208ENST00000555034 CCNB3Q8WWL7 1395 aa12.34□□□□□ -0.43
FOXN3-208ENST00000555034 HSPA2P54652 639 aa12.34□□□□□ -0.43
FOXN3-208ENST00000555034 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
FOXN3-208ENST00000555034 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
FOXN3-208ENST00000555034 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
FOXN3-208ENST00000555034 SIGLEC1Q9BZZ2 1709 aa12.32□□□□□ -0.44
FOXN3-208ENST00000555034 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
FOXN3-208ENST00000555034 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-208ENST00000555034 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
FOXN3-208ENST00000555034 NPATQ14207 1427 aa12.3□□□□□ -0.44
FOXN3-208ENST00000555034 ITSN2Q9NZM3 1697 aa12.3□□□□□ -0.44
FOXN3-208ENST00000555034 CEBPAP49715 358 aaPredicted RBP12.3□□□□□ -0.44
FOXN3-208ENST00000555034 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
FOXN3-208ENST00000555034 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
FOXN3-208ENST00000555034 SAMD9LQ8IVG5 1584 aa12.29□□□□□ -0.44
FOXN3-208ENST00000555034 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
FOXN3-208ENST00000555034 CDC42BPAQ5VT25 1732 aa12.28□□□□□ -0.44
FOXN3-208ENST00000555034 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
FOXN3-208ENST00000555034 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.446e-6■■■■□ 20.3
FOXN3-208ENST00000555034 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
FOXN3-208ENST00000555034 PTPRTO14522 1441 aa12.28□□□□□ -0.44
FOXN3-208ENST00000555034 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
FOXN3-208ENST00000555034 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
FOXN3-208ENST00000555034 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.45
FOXN3-208ENST00000555034 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
FOXN3-208ENST00000555034 A2MP01023 1474 aa12.26□□□□□ -0.45
FOXN3-208ENST00000555034 ATP7AQ04656 1500 aa12.26□□□□□ -0.45
FOXN3-208ENST00000555034 ZMYM3Q14202 1370 aa12.25□□□□□ -0.45
FOXN3-208ENST00000555034 MROH2AA6NES4 1674 aa12.24□□□□□ -0.45
FOXN3-208ENST00000555034 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
FOXN3-208ENST00000555034 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
FOXN3-208ENST00000555034 C3P01024 1663 aa12.22□□□□□ -0.45
FOXN3-208ENST00000555034 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
FOXN3-208ENST00000555034 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
FOXN3-208ENST00000555034 DHX29Q7Z478 1369 aaKnown RBP12.21□□□□□ -0.45
FOXN3-208ENST00000555034 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
FOXN3-208ENST00000555034 PKD2Q13563 968 aa12.21□□□□□ -0.45
FOXN3-208ENST00000555034 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.46
FOXN3-208ENST00000555034 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
FOXN3-208ENST00000555034 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
FOXN3-208ENST00000555034 GGT6Q6P531 493 aa12.2□□□□□ -0.46
FOXN3-208ENST00000555034 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
FOXN3-208ENST00000555034 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
FOXN3-208ENST00000555034 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
FOXN3-208ENST00000555034 PLA2R1Q13018 1463 aa12.18□□□□□ -0.46
FOXN3-208ENST00000555034 CCDC141Q6ZP82 1450 aa12.18□□□□□ -0.46
FOXN3-208ENST00000555034 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
FOXN3-208ENST00000555034 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
FOXN3-208ENST00000555034 PTPRKQ15262 1439 aa12.17□□□□□ -0.46
FOXN3-208ENST00000555034 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
FOXN3-208ENST00000555034 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
FOXN3-208ENST00000555034 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
FOXN3-208ENST00000555034 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
FOXN3-208ENST00000555034 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
FOXN3-208ENST00000555034 KIF3BO15066 747 aa12.14□□□□□ -0.47
FOXN3-208ENST00000555034 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
FOXN3-208ENST00000555034 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
FOXN3-208ENST00000555034 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
FOXN3-208ENST00000555034 CAMSAP2Q08AD1 1489 aa12.13□□□□□ -0.47
FOXN3-208ENST00000555034 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
FOXN3-208ENST00000555034 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
FOXN3-208ENST00000555034 A2ML1A8K2U0 1454 aa12.12□□□□□ -0.47
FOXN3-208ENST00000555034 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
FOXN3-208ENST00000555034 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-208ENST00000555034 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
FOXN3-208ENST00000555034 CEP170BQ9Y4F5 1589 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-208ENST00000555034 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
FOXN3-208ENST00000555034 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-208ENST00000555034 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
FOXN3-208ENST00000555034 PZPP20742 1482 aa12.1□□□□□ -0.47
FOXN3-208ENST00000555034 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
FOXN3-208ENST00000555034 LTBP4Q8N2S1 1624 aa12.1□□□□□ -0.47
FOXN3-208ENST00000555034 TNRQ92752 1358 aa12.09□□□□□ -0.47
FOXN3-208ENST00000555034 MYO3AQ8NEV4 1616 aa12.09□□□□□ -0.47
FOXN3-208ENST00000555034 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
FOXN3-208ENST00000555034 NLRP1Q9C000 1473 aa12.08□□□□□ -0.47
FOXN3-208ENST00000555034 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
FOXN3-208ENST00000555034 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
FOXN3-208ENST00000555034 MAST1Q9Y2H9 1570 aa12.06□□□□□ -0.48
FOXN3-208ENST00000555034 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
FOXN3-208ENST00000555034 FBXO31Q5XUX0 539 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-208ENST00000555034 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-208ENST00000555034 EIF2AK4Q9P2K8 1649 aaKnown RBP12.03□□□□□ -0.48
FOXN3-208ENST00000555034 CPS1P31327 1500 aa12.02□□□□□ -0.48
FOXN3-208ENST00000555034 DUOX2Q9NRD8 1548 aa12.02□□□□□ -0.48
FOXN3-208ENST00000555034 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
FOXN3-208ENST00000555034 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
FOXN3-208ENST00000555034 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.49
FOXN3-208ENST00000555034 RNF17Q9BXT8 1623 aaKnown RBP12.01□□□□□ -0.49
FOXN3-208ENST00000555034 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
FOXN3-208ENST00000555034 TOM1O60784 492 aa12.01□□□□□ -0.49
FOXN3-208ENST00000555034 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-208ENST00000555034 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
FOXN3-208ENST00000555034 MED14O60244 1454 aa12.01□□□□□ -0.49
FOXN3-208ENST00000555034 UGGT1Q9NYU2 1555 aa12.01□□□□□ -0.49
FOXN3-208ENST00000555034 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
FOXN3-208ENST00000555034 DISP3Q9P2K9 1392 aa12□□□□□ -0.49
FOXN3-208ENST00000555034 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms