RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
SRP54-AS1-202ENST00000555015 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
SRP54-AS1-202ENST00000555015 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.73
SRP54-AS1-202ENST00000555015 DEPDC5O75140 1603 aa19.64■□□□□ 0.73
SRP54-AS1-202ENST00000555015 CNTLNQ9NXG0 1405 aa19.63■□□□□ 0.73
SRP54-AS1-202ENST00000555015 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SRP54-AS1-202ENST00000555015 MROH1Q8NDA8 1641 aa19.62■□□□□ 0.73
SRP54-AS1-202ENST00000555015 C3P01024 1663 aa19.62■□□□□ 0.73
SRP54-AS1-202ENST00000555015 KIF3BO15066 747 aa19.61■□□□□ 0.73
SRP54-AS1-202ENST00000555015 PRDM15P57071 1507 aaPredicted RBP19.61■□□□□ 0.73
SRP54-AS1-202ENST00000555015 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
SRP54-AS1-202ENST00000555015 GCC2Q8IWJ2 1684 aa19.6■□□□□ 0.73
SRP54-AS1-202ENST00000555015 ITGAEP38570 1179 aa19.6■□□□□ 0.73
SRP54-AS1-202ENST00000555015 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
SRP54-AS1-202ENST00000555015 GGT6Q6P531 493 aa19.59■□□□□ 0.73
SRP54-AS1-202ENST00000555015 ESF1Q9H501 851 aaKnown RBP19.59■□□□□ 0.73
SRP54-AS1-202ENST00000555015 ANKRD50Q9ULJ7 1429 aa19.58■□□□□ 0.72
SRP54-AS1-202ENST00000555015 CEP152O94986 1710 aa19.56■□□□□ 0.72
SRP54-AS1-202ENST00000555015 UNC13BO14795 1591 aa19.54■□□□□ 0.72
SRP54-AS1-202ENST00000555015 ABCC3O15438 1527 aa19.54■□□□□ 0.72
SRP54-AS1-202ENST00000555015 LMTK3Q96Q04 1460 aa19.53■□□□□ 0.72
SRP54-AS1-202ENST00000555015 CAMSAP1Q5T5Y3 1602 aa19.52■□□□□ 0.72
SRP54-AS1-202ENST00000555015 VWDEQ8N2E2 1590 aa19.52■□□□□ 0.71
SRP54-AS1-202ENST00000555015 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
SRP54-AS1-202ENST00000555015 PREX1Q8TCU6 1659 aa19.5■□□□□ 0.71
SRP54-AS1-202ENST00000555015 ZMYM3Q14202 1370 aa19.5■□□□□ 0.71
SRP54-AS1-202ENST00000555015 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
SRP54-AS1-202ENST00000555015 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
SRP54-AS1-202ENST00000555015 NAIPQ13075 1403 aa19.49■□□□□ 0.71
SRP54-AS1-202ENST00000555015 KANK1Q14678 1352 aa19.48■□□□□ 0.71
SRP54-AS1-202ENST00000555015 LMTK2Q8IWU2 1503 aa19.48■□□□□ 0.71
SRP54-AS1-202ENST00000555015 NPATQ14207 1427 aa19.47■□□□□ 0.71
SRP54-AS1-202ENST00000555015 PZPP20742 1482 aa19.47■□□□□ 0.71
SRP54-AS1-202ENST00000555015 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
SRP54-AS1-202ENST00000555015 IQGAP3Q86VI3 1631 aa19.46■□□□□ 0.71
SRP54-AS1-202ENST00000555015 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
SRP54-AS1-202ENST00000555015 TET3O43151 1660 aa19.44■□□□□ 0.7
SRP54-AS1-202ENST00000555015 EFCAB6Q5THR3 1501 aa19.43■□□□□ 0.7
SRP54-AS1-202ENST00000555015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.76e-9■■□□□ 12.6
SRP54-AS1-202ENST00000555015 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
SRP54-AS1-202ENST00000555015 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
SRP54-AS1-202ENST00000555015 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
SRP54-AS1-202ENST00000555015 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
SRP54-AS1-202ENST00000555015 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
SRP54-AS1-202ENST00000555015 UHRF1BP1Q6BDS2 1440 aa19.38■□□□□ 0.69
SRP54-AS1-202ENST00000555015 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
SRP54-AS1-202ENST00000555015 RPRD2Q5VT52 1461 aaKnown RBP19.36■□□□□ 0.69
SRP54-AS1-202ENST00000555015 E9PCH4 1651 aa19.36■□□□□ 0.69
SRP54-AS1-202ENST00000555015 NUP155O75694 1391 aa19.35■□□□□ 0.69
SRP54-AS1-202ENST00000555015 CEP170BQ9Y4F5 1589 aaPredicted RBP19.34■□□□□ 0.69
SRP54-AS1-202ENST00000555015 STRCQ7RTU9 1775 aa19.34■□□□□ 0.69
SRP54-AS1-202ENST00000555015 TNRQ92752 1358 aa19.33■□□□□ 0.69
SRP54-AS1-202ENST00000555015 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
SRP54-AS1-202ENST00000555015 FBXO31Q5XUX0 539 aaPredicted RBP19.32■□□□□ 0.68
SRP54-AS1-202ENST00000555015 NLRP1Q9C000 1473 aa19.31■□□□□ 0.68
SRP54-AS1-202ENST00000555015 HSPA2P54652 639 aa19.31■□□□□ 0.68
SRP54-AS1-202ENST00000555015 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
SRP54-AS1-202ENST00000555015 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
SRP54-AS1-202ENST00000555015 SYNMO15061 1565 aa19.29■□□□□ 0.68
SRP54-AS1-202ENST00000555015 NOS1P29475 1434 aa19.28■□□□□ 0.68
SRP54-AS1-202ENST00000555015 FBXO41Q8TF61 875 aa19.28■□□□□ 0.68
SRP54-AS1-202ENST00000555015 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
SRP54-AS1-202ENST00000555015 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
SRP54-AS1-202ENST00000555015 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
SRP54-AS1-202ENST00000555015 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
SRP54-AS1-202ENST00000555015 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
SRP54-AS1-202ENST00000555015 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
SRP54-AS1-202ENST00000555015 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
SRP54-AS1-202ENST00000555015 PLA2R1Q13018 1463 aa19.21■□□□□ 0.67
SRP54-AS1-202ENST00000555015 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
SRP54-AS1-202ENST00000555015 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
SRP54-AS1-202ENST00000555015 TRPM2O94759 1503 aa19.19■□□□□ 0.66
SRP54-AS1-202ENST00000555015 PTPRTO14522 1441 aa19.18■□□□□ 0.66
SRP54-AS1-202ENST00000555015 HRCP23327 699 aa19.18■□□□□ 0.66
SRP54-AS1-202ENST00000555015 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
SRP54-AS1-202ENST00000555015 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
SRP54-AS1-202ENST00000555015 MYO5BQ9ULV0 1848 aa19.17■□□□□ 0.66
SRP54-AS1-202ENST00000555015 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
SRP54-AS1-202ENST00000555015 PKD2Q13563 968 aa19.15■□□□□ 0.66
SRP54-AS1-202ENST00000555015 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.66
SRP54-AS1-202ENST00000555015 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.65
SRP54-AS1-202ENST00000555015 IDI1Q13907 227 aa19.13■□□□□ 0.65
SRP54-AS1-202ENST00000555015 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
SRP54-AS1-202ENST00000555015 CLTCL1P53675 1640 aa19.13■□□□□ 0.65
SRP54-AS1-202ENST00000555015 KIF1BO60333 1816 aa19.13■□□□□ 0.65
SRP54-AS1-202ENST00000555015 SLIT1O75093 1534 aa19.12■□□□□ 0.65
SRP54-AS1-202ENST00000555015 ARHGAP23Q9P227 1491 aa19.1■□□□□ 0.65
SRP54-AS1-202ENST00000555015 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
SRP54-AS1-202ENST00000555015 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
SRP54-AS1-202ENST00000555015 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
SRP54-AS1-202ENST00000555015 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
SRP54-AS1-202ENST00000555015 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
SRP54-AS1-202ENST00000555015 MED14O60244 1454 aa19.05■□□□□ 0.64
SRP54-AS1-202ENST00000555015 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
SRP54-AS1-202ENST00000555015 FOXD1Q16676 465 aa19.04■□□□□ 0.64
SRP54-AS1-202ENST00000555015 ANKLE2Q86XL3 938 aa19.04■□□□□ 0.64
SRP54-AS1-202ENST00000555015 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
SRP54-AS1-202ENST00000555015 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SRP54-AS1-202ENST00000555015 CCDC144AA2RUR9 1427 aa19.02■□□□□ 0.64
SRP54-AS1-202ENST00000555015 ZFYVE9O95405 1425 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms