RNA–Protein interactions for RNA: ENST00000554961.5

PSMA6-209, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-209ENST00000554961 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
PSMA6-209ENST00000554961 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
PSMA6-209ENST00000554961 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
PSMA6-209ENST00000554961 RGS12O14924 1447 aa13.37□□□□□ -0.27
PSMA6-209ENST00000554961 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
PSMA6-209ENST00000554961 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
PSMA6-209ENST00000554961 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
PSMA6-209ENST00000554961 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
PSMA6-209ENST00000554961 EP400Q96L91 3159 aa13.34□□□□□ -0.27
PSMA6-209ENST00000554961 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
PSMA6-209ENST00000554961 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
PSMA6-209ENST00000554961 SPATA31A6Q5VVP1 1343 aa13.31□□□□□ -0.28
PSMA6-209ENST00000554961 KIF14Q15058 1648 aa13.31□□□□□ -0.28
PSMA6-209ENST00000554961 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
PSMA6-209ENST00000554961 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
PSMA6-209ENST00000554961 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
PSMA6-209ENST00000554961 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
PSMA6-209ENST00000554961 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
PSMA6-209ENST00000554961 TNRQ92752 1358 aa13.29□□□□□ -0.28
PSMA6-209ENST00000554961 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
PSMA6-209ENST00000554961 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
PSMA6-209ENST00000554961 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
PSMA6-209ENST00000554961 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
PSMA6-209ENST00000554961 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.28
PSMA6-209ENST00000554961 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
PSMA6-209ENST00000554961 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
PSMA6-209ENST00000554961 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
PSMA6-209ENST00000554961 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
PSMA6-209ENST00000554961 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
PSMA6-209ENST00000554961 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
PSMA6-209ENST00000554961 PZPP20742 1482 aa13.23□□□□□ -0.29
PSMA6-209ENST00000554961 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-209ENST00000554961 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-209ENST00000554961 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-209ENST00000554961 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-209ENST00000554961 YY1P25490 414 aa13.22□□□□□ -0.29
PSMA6-209ENST00000554961 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
PSMA6-209ENST00000554961 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
PSMA6-209ENST00000554961 A2MP01023 1474 aa13.2□□□□□ -0.3
PSMA6-209ENST00000554961 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
PSMA6-209ENST00000554961 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
PSMA6-209ENST00000554961 AFF2P51816 1311 aa13.18□□□□□ -0.3
PSMA6-209ENST00000554961 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
PSMA6-209ENST00000554961 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
PSMA6-209ENST00000554961 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
PSMA6-209ENST00000554961 GGT6Q6P531 493 aa13.16□□□□□ -0.3
PSMA6-209ENST00000554961 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
PSMA6-209ENST00000554961 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
PSMA6-209ENST00000554961 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
PSMA6-209ENST00000554961 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
PSMA6-209ENST00000554961 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
PSMA6-209ENST00000554961 ABCC3O15438 1527 aa13.14□□□□□ -0.31
PSMA6-209ENST00000554961 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
PSMA6-209ENST00000554961 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
PSMA6-209ENST00000554961 EEA1Q15075 1411 aa13.13□□□□□ -0.31
PSMA6-209ENST00000554961 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
PSMA6-209ENST00000554961 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
PSMA6-209ENST00000554961 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
PSMA6-209ENST00000554961 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
PSMA6-209ENST00000554961 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
PSMA6-209ENST00000554961 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
PSMA6-209ENST00000554961 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
PSMA6-209ENST00000554961 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
PSMA6-209ENST00000554961 CLIP1P30622 1438 aa13.09□□□□□ -0.31
PSMA6-209ENST00000554961 QTRT2Q9H974 415 aaKnown RBP13.09□□□□□ -0.31
PSMA6-209ENST00000554961 SLIT1O75093 1534 aa13.08□□□□□ -0.31
PSMA6-209ENST00000554961 MSH6P52701 1360 aa13.08□□□□□ -0.31
PSMA6-209ENST00000554961 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
PSMA6-209ENST00000554961 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
PSMA6-209ENST00000554961 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
PSMA6-209ENST00000554961 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
PSMA6-209ENST00000554961 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
PSMA6-209ENST00000554961 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
PSMA6-209ENST00000554961 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
PSMA6-209ENST00000554961 HRCP23327 699 aa13.04□□□□□ -0.32
PSMA6-209ENST00000554961 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
PSMA6-209ENST00000554961 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
PSMA6-209ENST00000554961 KCNA6P17658 529 aa13.01□□□□□ -0.33
PSMA6-209ENST00000554961 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
PSMA6-209ENST00000554961 LTKP29376 864 aa13□□□□□ -0.33
PSMA6-209ENST00000554961 C8orf37Q96NL8 207 aa13□□□□□ -0.33
PSMA6-209ENST00000554961 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
PSMA6-209ENST00000554961 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
PSMA6-209ENST00000554961 UNC13BO14795 1591 aa12.98□□□□□ -0.33
PSMA6-209ENST00000554961 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
PSMA6-209ENST00000554961 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
PSMA6-209ENST00000554961 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
PSMA6-209ENST00000554961 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
PSMA6-209ENST00000554961 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
PSMA6-209ENST00000554961 TET3O43151 1660 aa12.96□□□□□ -0.33
PSMA6-209ENST00000554961 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
PSMA6-209ENST00000554961 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
PSMA6-209ENST00000554961 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
PSMA6-209ENST00000554961 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
PSMA6-209ENST00000554961 ATRNO75882 1429 aa12.95□□□□□ -0.34
PSMA6-209ENST00000554961 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
PSMA6-209ENST00000554961 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
PSMA6-209ENST00000554961 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
PSMA6-209ENST00000554961 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
PSMA6-209ENST00000554961 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms