RNA–Protein interactions for RNA: ENST00000554886.1

ATL1-205, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-205ENST00000554886 PTPRMP28827 1452 aa20.58■□□□□ 0.89
ATL1-205ENST00000554886 FER1L4A9Z1Z3 1794 aa20.58■□□□□ 0.89
ATL1-205ENST00000554886 RIMS1Q86UR5 1692 aaKnown RBP20.57■□□□□ 0.88
ATL1-205ENST00000554886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.88
ATL1-205ENST00000554886 ANKRD50Q9ULJ7 1429 aa20.55■□□□□ 0.88
ATL1-205ENST00000554886 EIF2AK4Q9P2K8 1649 aaKnown RBP20.54■□□□□ 0.88
ATL1-205ENST00000554886 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
ATL1-205ENST00000554886 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
ATL1-205ENST00000554886 KANK1Q14678 1352 aa20.53■□□□□ 0.88
ATL1-205ENST00000554886 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
ATL1-205ENST00000554886 RNF17Q9BXT8 1623 aaKnown RBP20.47■□□□□ 0.87
ATL1-205ENST00000554886 CLTCQ00610 1675 aaKnown RBP20.46■□□□□ 0.87
ATL1-205ENST00000554886 SETD1BQ9UPS6 1966 aaKnown RBP20.45■□□□□ 0.86
ATL1-205ENST00000554886 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
ATL1-205ENST00000554886 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
ATL1-205ENST00000554886 NAIPQ13075 1403 aa20.42■□□□□ 0.86
ATL1-205ENST00000554886 C3P01024 1663 aa20.42■□□□□ 0.86
ATL1-205ENST00000554886 HFM1A2PYH4 1435 aa20.41■□□□□ 0.86
ATL1-205ENST00000554886 DEPDC5O75140 1603 aa20.39■□□□□ 0.86
ATL1-205ENST00000554886 MROH1Q8NDA8 1641 aa20.39■□□□□ 0.86
ATL1-205ENST00000554886 ABCC3O15438 1527 aa20.39■□□□□ 0.85
ATL1-205ENST00000554886 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
ATL1-205ENST00000554886 NPATQ14207 1427 aa20.39■□□□□ 0.85
ATL1-205ENST00000554886 NUP155O75694 1391 aa20.39■□□□□ 0.85
ATL1-205ENST00000554886 TRIM52Q96A61 297 aa20.39■□□□□ 0.85
ATL1-205ENST00000554886 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
ATL1-205ENST00000554886 ACIN1Q9UKV3 1341 aaKnown RBP20.38■□□□□ 0.85
ATL1-205ENST00000554886 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
ATL1-205ENST00000554886 PZPP20742 1482 aa20.36■□□□□ 0.85
ATL1-205ENST00000554886 CEP152O94986 1710 aa20.34■□□□□ 0.85
ATL1-205ENST00000554886 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
ATL1-205ENST00000554886 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
ATL1-205ENST00000554886 GCC2Q8IWJ2 1684 aa20.33■□□□□ 0.85
ATL1-205ENST00000554886 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.84
ATL1-205ENST00000554886 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
ATL1-205ENST00000554886 LMTK2Q8IWU2 1503 aa20.32■□□□□ 0.84
ATL1-205ENST00000554886 CFAP65Q6ZU64 1925 aaKnown RBP20.32■□□□□ 0.84
ATL1-205ENST00000554886 UNC13BO14795 1591 aa20.32■□□□□ 0.84
ATL1-205ENST00000554886 TNRQ92752 1358 aa20.32■□□□□ 0.84
ATL1-205ENST00000554886 CAMSAP1Q5T5Y3 1602 aa20.31■□□□□ 0.84
ATL1-205ENST00000554886 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
ATL1-205ENST00000554886 PREX1Q8TCU6 1659 aa20.28■□□□□ 0.84
ATL1-205ENST00000554886 HSPA2P54652 639 aa20.26■□□□□ 0.83
ATL1-205ENST00000554886 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
ATL1-205ENST00000554886 ERVK-7P63135 1459 aa20.25■□□□□ 0.83
ATL1-205ENST00000554886 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
ATL1-205ENST00000554886 IQGAP3Q86VI3 1631 aa20.25■□□□□ 0.83
ATL1-205ENST00000554886 HRCP23327 699 aa20.25■□□□□ 0.83
ATL1-205ENST00000554886 TET3O43151 1660 aa20.25■□□□□ 0.83
ATL1-205ENST00000554886 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
ATL1-205ENST00000554886 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
ATL1-205ENST00000554886 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
ATL1-205ENST00000554886 THEMISQ8N1K5 641 aaPredicted RBP20.23■□□□□ 0.83
ATL1-205ENST00000554886 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
ATL1-205ENST00000554886 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
ATL1-205ENST00000554886 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
ATL1-205ENST00000554886 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
ATL1-205ENST00000554886 PKD2Q13563 968 aa20.21■□□□□ 0.83
ATL1-205ENST00000554886 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
ATL1-205ENST00000554886 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
ATL1-205ENST00000554886 IDI1Q13907 227 aa20.19■□□□□ 0.82
ATL1-205ENST00000554886 NOS1P29475 1434 aa20.19■□□□□ 0.82
ATL1-205ENST00000554886 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
ATL1-205ENST00000554886 CEP170BQ9Y4F5 1589 aaPredicted RBP20.17■□□□□ 0.82
ATL1-205ENST00000554886 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
ATL1-205ENST00000554886 E9PCH4 1651 aa20.16■□□□□ 0.82
ATL1-205ENST00000554886 UGGT1Q9NYU2 1555 aa20.14■□□□□ 0.81
ATL1-205ENST00000554886 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
ATL1-205ENST00000554886 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
ATL1-205ENST00000554886 ZNF142P52746 1687 aaPredicted RBP20.13■□□□□ 0.81
ATL1-205ENST00000554886 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
ATL1-205ENST00000554886 SYNMO15061 1565 aa20.09■□□□□ 0.81
ATL1-205ENST00000554886 NCKAP5LQ9HCH0 1330 aa20.09■□□□□ 0.81
ATL1-205ENST00000554886 PTPRTO14522 1441 aa20.09■□□□□ 0.81
ATL1-205ENST00000554886 FOXD1Q16676 465 aa20.08■□□□□ 0.81
ATL1-205ENST00000554886 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
ATL1-205ENST00000554886 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
ATL1-205ENST00000554886 TXNDC2Q86VQ3 553 aa20.06■□□□□ 0.8
ATL1-205ENST00000554886 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
ATL1-205ENST00000554886 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
ATL1-205ENST00000554886 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
ATL1-205ENST00000554886 ZNF326Q5BKZ1 582 aaKnown RBP20.02■□□□□ 0.8
ATL1-205ENST00000554886 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.8
ATL1-205ENST00000554886 KDM5AP29375 1690 aaKnown RBP20.01■□□□□ 0.79
ATL1-205ENST00000554886 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
ATL1-205ENST00000554886 STRCQ7RTU9 1775 aa20■□□□□ 0.79
ATL1-205ENST00000554886 ADGRB3O60242 1522 aa20■□□□□ 0.79
ATL1-205ENST00000554886 TRPM2O94759 1503 aa20■□□□□ 0.79
ATL1-205ENST00000554886 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
ATL1-205ENST00000554886 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
ATL1-205ENST00000554886 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
ATL1-205ENST00000554886 LTKP29376 864 aa19.98■□□□□ 0.79
ATL1-205ENST00000554886 SLIT1O75093 1534 aa19.97■□□□□ 0.79
ATL1-205ENST00000554886 BCANQ96GW7 911 aa19.97■□□□□ 0.79
ATL1-205ENST00000554886 ARHGAP23Q9P227 1491 aa19.97■□□□□ 0.79
ATL1-205ENST00000554886 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
ATL1-205ENST00000554886 SCAF11Q99590 1463 aaKnown RBP19.95■□□□□ 0.78
ATL1-205ENST00000554886 NPHP4O75161 1426 aaPredicted RBP19.94■□□□□ 0.78
ATL1-205ENST00000554886 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
ATL1-205ENST00000554886 KIF1BO60333 1816 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms