RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ATP10AO60312 1499 aa21.19■□□□□ 0.98
SHOX2-206ENST00000554685 REREQ9P2R6 1566 aa21.18■□□□□ 0.98
SHOX2-206ENST00000554685 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SHOX2-206ENST00000554685 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
SHOX2-206ENST00000554685 UNC13BO14795 1591 aa21.16■□□□□ 0.98
SHOX2-206ENST00000554685 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
SHOX2-206ENST00000554685 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
SHOX2-206ENST00000554685 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
SHOX2-206ENST00000554685 NUP155O75694 1391 aa21.13■□□□□ 0.97
SHOX2-206ENST00000554685 BCORL1Q5H9F3 1711 aa21.13■□□□□ 0.97
SHOX2-206ENST00000554685 KIF3BO15066 747 aa21.13■□□□□ 0.97
SHOX2-206ENST00000554685 KANK1Q14678 1352 aa21.12■□□□□ 0.97
SHOX2-206ENST00000554685 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
SHOX2-206ENST00000554685 AGLP35573 1532 aa21.11■□□□□ 0.97
SHOX2-206ENST00000554685 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
SHOX2-206ENST00000554685 MPHOSPH9Q99550 1183 aa21.09■□□□□ 0.97
SHOX2-206ENST00000554685 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
SHOX2-206ENST00000554685 PRDM15P57071 1507 aaPredicted RBP21.09■□□□□ 0.97
SHOX2-206ENST00000554685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.97
SHOX2-206ENST00000554685 PZPP20742 1482 aa21.07■□□□□ 0.96
SHOX2-206ENST00000554685 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
SHOX2-206ENST00000554685 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
SHOX2-206ENST00000554685 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
SHOX2-206ENST00000554685 VWDEQ8N2E2 1590 aa21.03■□□□□ 0.96
SHOX2-206ENST00000554685 GGT6Q6P531 493 aa21.02■□□□□ 0.96
SHOX2-206ENST00000554685 LMTK2Q8IWU2 1503 aa21■□□□□ 0.95
SHOX2-206ENST00000554685 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
SHOX2-206ENST00000554685 PKD2Q13563 968 aa20.99■□□□□ 0.95
SHOX2-206ENST00000554685 TET3O43151 1660 aa20.97■□□□□ 0.95
SHOX2-206ENST00000554685 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
SHOX2-206ENST00000554685 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
SHOX2-206ENST00000554685 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
SHOX2-206ENST00000554685 ABCC3O15438 1527 aa20.94■□□□□ 0.94
SHOX2-206ENST00000554685 EFCAB6Q5THR3 1501 aa20.92■□□□□ 0.94
SHOX2-206ENST00000554685 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
SHOX2-206ENST00000554685 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
SHOX2-206ENST00000554685 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
SHOX2-206ENST00000554685 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
SHOX2-206ENST00000554685 CEP152O94986 1710 aa20.9■□□□□ 0.94
SHOX2-206ENST00000554685 ARHGAP31Q2M1Z3 1444 aa20.88■□□□□ 0.93
SHOX2-206ENST00000554685 MLECQ14165 292 aa20.88■□□□□ 0.93
SHOX2-206ENST00000554685 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
SHOX2-206ENST00000554685 CAMSAP1Q5T5Y3 1602 aa20.87■□□□□ 0.93
SHOX2-206ENST00000554685 E9PCH4 1651 aa20.86■□□□□ 0.93
SHOX2-206ENST00000554685 TIMELESSQ9UNS1 1208 aa20.84■□□□□ 0.93
SHOX2-206ENST00000554685 PTPRTO14522 1441 aa20.83■□□□□ 0.93
SHOX2-206ENST00000554685 NPATQ14207 1427 aa20.83■□□□□ 0.93
SHOX2-206ENST00000554685 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
SHOX2-206ENST00000554685 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
SHOX2-206ENST00000554685 TRPM2O94759 1503 aa20.82■□□□□ 0.92
SHOX2-206ENST00000554685 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
SHOX2-206ENST00000554685 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
SHOX2-206ENST00000554685 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
SHOX2-206ENST00000554685 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-206ENST00000554685 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
SHOX2-206ENST00000554685 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
SHOX2-206ENST00000554685 MROH2AA6NES4 1674 aa20.77■□□□□ 0.92
SHOX2-206ENST00000554685 NOS1P29475 1434 aa20.77■□□□□ 0.91
SHOX2-206ENST00000554685 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
SHOX2-206ENST00000554685 FER1L4A9Z1Z3 1794 aa20.73■□□□□ 0.91
SHOX2-206ENST00000554685 ERVK-7P63135 1459 aa20.73■□□□□ 0.91
SHOX2-206ENST00000554685 PREX1Q8TCU6 1659 aa20.71■□□□□ 0.91
SHOX2-206ENST00000554685 SLC52A1Q9NWF4 448 aa20.7■□□□□ 0.9
SHOX2-206ENST00000554685 SPATA31D1Q6ZQQ2 1576 aa20.7■□□□□ 0.9
SHOX2-206ENST00000554685 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
SHOX2-206ENST00000554685 ADAMTSL3P82987 1691 aa20.69■□□□□ 0.9
SHOX2-206ENST00000554685 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
SHOX2-206ENST00000554685 SYNMO15061 1565 aa20.67■□□□□ 0.9
SHOX2-206ENST00000554685 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
SHOX2-206ENST00000554685 PIK3C2BO00750 1634 aa20.65■□□□□ 0.9
SHOX2-206ENST00000554685 FBXO31Q5XUX0 539 aaPredicted RBP20.65■□□□□ 0.9
SHOX2-206ENST00000554685 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
SHOX2-206ENST00000554685 TNRQ92752 1358 aa20.63■□□□□ 0.89
SHOX2-206ENST00000554685 RIMS1Q86UR5 1692 aaKnown RBP20.63■□□□□ 0.89
SHOX2-206ENST00000554685 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
SHOX2-206ENST00000554685 C3P01024 1663 aa20.62■□□□□ 0.89
SHOX2-206ENST00000554685 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
SHOX2-206ENST00000554685 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
SHOX2-206ENST00000554685 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
SHOX2-206ENST00000554685 KIF1BO60333 1816 aa20.61■□□□□ 0.89
SHOX2-206ENST00000554685 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
SHOX2-206ENST00000554685 ADGRB3O60242 1522 aa20.6■□□□□ 0.89
SHOX2-206ENST00000554685 IDI1Q13907 227 aa20.59■□□□□ 0.89
SHOX2-206ENST00000554685 NLRP1Q9C000 1473 aa20.58■□□□□ 0.89
SHOX2-206ENST00000554685 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.89
SHOX2-206ENST00000554685 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
SHOX2-206ENST00000554685 RPGRIP1LQ68CZ1 1315 aa20.56■□□□□ 0.88
SHOX2-206ENST00000554685 CEBPAP49715 358 aaPredicted RBP20.56■□□□□ 0.88
SHOX2-206ENST00000554685 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
SHOX2-206ENST00000554685 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
SHOX2-206ENST00000554685 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
SHOX2-206ENST00000554685 PTPRMP28827 1452 aa20.53■□□□□ 0.88
SHOX2-206ENST00000554685 UHRF1BP1Q6BDS2 1440 aa20.53■□□□□ 0.88
SHOX2-206ENST00000554685 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
SHOX2-206ENST00000554685 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
SHOX2-206ENST00000554685 MYOM2P54296 1465 aa20.5■□□□□ 0.87
SHOX2-206ENST00000554685 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
SHOX2-206ENST00000554685 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
SHOX2-206ENST00000554685 MYO3AQ8NEV4 1616 aa20.46■□□□□ 0.87
SHOX2-206ENST00000554685 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms