RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 TNRQ92752 1358 aa23.27■■□□□ 1.32
CFAP54-206ENST00000554621 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
CFAP54-206ENST00000554621 THEMISQ8N1K5 641 aaPredicted RBP23.26■■□□□ 1.31
CFAP54-206ENST00000554621 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
CFAP54-206ENST00000554621 TSPY4P0CV99 314 aa23.25■■□□□ 1.31
CFAP54-206ENST00000554621 TSPY10P0CW01 314 aa23.25■■□□□ 1.31
CFAP54-206ENST00000554621 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
CFAP54-206ENST00000554621 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
CFAP54-206ENST00000554621 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
CFAP54-206ENST00000554621 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
CFAP54-206ENST00000554621 CPS1P31327 1500 aa23.23■■□□□ 1.31
CFAP54-206ENST00000554621 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
CFAP54-206ENST00000554621 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
CFAP54-206ENST00000554621 KDM5DQ9BY66 1539 aa23.22■■□□□ 1.31
CFAP54-206ENST00000554621 FBXO31Q5XUX0 539 aaPredicted RBP23.21■■□□□ 1.31
CFAP54-206ENST00000554621 PZPP20742 1482 aa23.2■■□□□ 1.3
CFAP54-206ENST00000554621 SHANK2Q9UPX8 1470 aa23.18■■□□□ 1.3
CFAP54-206ENST00000554621 POLR1AO95602 1720 aaPredicted RBP23.18■■□□□ 1.3
CFAP54-206ENST00000554621 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
CFAP54-206ENST00000554621 HSPA1LP34931 641 aa23.16■■□□□ 1.3
CFAP54-206ENST00000554621 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
CFAP54-206ENST00000554621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.3
CFAP54-206ENST00000554621 CAMSAP2Q08AD1 1489 aa23.15■■□□□ 1.3
CFAP54-206ENST00000554621 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
CFAP54-206ENST00000554621 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
CFAP54-206ENST00000554621 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
CFAP54-206ENST00000554621 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
CFAP54-206ENST00000554621 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
CFAP54-206ENST00000554621 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
CFAP54-206ENST00000554621 MED14O60244 1454 aa23.05■■□□□ 1.28
CFAP54-206ENST00000554621 DEPDC5O75140 1603 aa23.05■■□□□ 1.28
CFAP54-206ENST00000554621 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
CFAP54-206ENST00000554621 VWDEQ8N2E2 1590 aa23.01■■□□□ 1.27
CFAP54-206ENST00000554621 IQGAP1P46940 1657 aa23■■□□□ 1.27
CFAP54-206ENST00000554621 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
CFAP54-206ENST00000554621 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
CFAP54-206ENST00000554621 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
CFAP54-206ENST00000554621 ABCC3O15438 1527 aa22.96■■□□□ 1.27
CFAP54-206ENST00000554621 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
CFAP54-206ENST00000554621 EIF2AK4Q9P2K8 1649 aaKnown RBP22.94■■□□□ 1.26
CFAP54-206ENST00000554621 ERVK-7P63135 1459 aa22.94■■□□□ 1.26
CFAP54-206ENST00000554621 MAST1Q9Y2H9 1570 aa22.93■■□□□ 1.26
CFAP54-206ENST00000554621 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
CFAP54-206ENST00000554621 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
CFAP54-206ENST00000554621 SYNMO15061 1565 aa22.93■■□□□ 1.26
CFAP54-206ENST00000554621 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
CFAP54-206ENST00000554621 LRRC7Q96NW7 1537 aa22.92■■□□□ 1.26
CFAP54-206ENST00000554621 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
CFAP54-206ENST00000554621 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
CFAP54-206ENST00000554621 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
CFAP54-206ENST00000554621 DUOX2Q9NRD8 1548 aa22.88■■□□□ 1.25
CFAP54-206ENST00000554621 APLP2Q06481 763 aa22.87■■□□□ 1.25
CFAP54-206ENST00000554621 KANK1Q14678 1352 aa22.87■■□□□ 1.25
CFAP54-206ENST00000554621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
CFAP54-206ENST00000554621 UBR1Q8IWV7 1749 aa22.83■■□□□ 1.25
CFAP54-206ENST00000554621 KIF15Q9NS87 1388 aa22.83■■□□□ 1.25
CFAP54-206ENST00000554621 CEP152O94986 1710 aa22.82■■□□□ 1.24
CFAP54-206ENST00000554621 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
CFAP54-206ENST00000554621 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
CFAP54-206ENST00000554621 ARHGAP31Q2M1Z3 1444 aa22.82■■□□□ 1.24
CFAP54-206ENST00000554621 CFAP65Q6ZU64 1925 aaKnown RBP22.81■■□□□ 1.24
CFAP54-206ENST00000554621 LTKP29376 864 aa22.81■■□□□ 1.24
CFAP54-206ENST00000554621 ALKQ9UM73 1620 aa22.81■■□□□ 1.24
CFAP54-206ENST00000554621 ERBINQ96RT1 1412 aa22.81■■□□□ 1.24
CFAP54-206ENST00000554621 SLIT1O75093 1534 aa22.8■■□□□ 1.24
CFAP54-206ENST00000554621 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
CFAP54-206ENST00000554621 KANK4Q5T7N3 995 aaPredicted RBP22.79■■□□□ 1.24
CFAP54-206ENST00000554621 MROH1Q8NDA8 1641 aa22.79■■□□□ 1.24
CFAP54-206ENST00000554621 ARHGAP23Q9P227 1491 aa22.78■■□□□ 1.24
CFAP54-206ENST00000554621 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
CFAP54-206ENST00000554621 BCANQ96GW7 911 aa22.76■■□□□ 1.23
CFAP54-206ENST00000554621 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
CFAP54-206ENST00000554621 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
CFAP54-206ENST00000554621 FAM135BQ49AJ0 1406 aa22.73■■□□□ 1.23
CFAP54-206ENST00000554621 KCNA6P17658 529 aa22.72■■□□□ 1.23
CFAP54-206ENST00000554621 ANKRD30AQ9BXX3 1397 aa22.72■■□□□ 1.23
CFAP54-206ENST00000554621 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
CFAP54-206ENST00000554621 ABCC5O15440 1437 aa22.71■■□□□ 1.23
CFAP54-206ENST00000554621 EFCAB6Q5THR3 1501 aa22.7■■□□□ 1.22
CFAP54-206ENST00000554621 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
CFAP54-206ENST00000554621 TMEM94Q12767 1356 aa22.69■■□□□ 1.22
CFAP54-206ENST00000554621 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
CFAP54-206ENST00000554621 IDI1Q13907 227 aa22.69■■□□□ 1.22
CFAP54-206ENST00000554621 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
CFAP54-206ENST00000554621 DAPK1P53355 1430 aa22.67■■□□□ 1.22
CFAP54-206ENST00000554621 SLC26A8Q96RN1 970 aa22.67■■□□□ 1.22
CFAP54-206ENST00000554621 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
CFAP54-206ENST00000554621 CROCC2H7BZ55 1655 aa22.66■■□□□ 1.22
CFAP54-206ENST00000554621 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
CFAP54-206ENST00000554621 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
CFAP54-206ENST00000554621 MSH6P52701 1360 aa22.64■■□□□ 1.22
CFAP54-206ENST00000554621 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
CFAP54-206ENST00000554621 RGS17Q9UGC6 210 aaPredicted RBP22.63■■□□□ 1.21
CFAP54-206ENST00000554621 LMTK2Q8IWU2 1503 aa22.62■■□□□ 1.21
CFAP54-206ENST00000554621 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
CFAP54-206ENST00000554621 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
CFAP54-206ENST00000554621 NKTRP30414 1462 aaKnown RBP22.6■■□□□ 1.21
CFAP54-206ENST00000554621 SLAIN2Q9P270 581 aa22.58■■□□□ 1.21
CFAP54-206ENST00000554621 RBM33Q96EV2 1170 aaKnown RBP22.57■■□□□ 1.2
CFAP54-206ENST00000554621 ROBO1Q9Y6N7 1651 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms