RNA–Protein interactions for RNA: ENST00000554620.5

PSMA6-207, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5

Gene PSMA6, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-207ENST00000554620 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
PSMA6-207ENST00000554620 RGS12O14924 1447 aa13.37□□□□□ -0.27
PSMA6-207ENST00000554620 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
PSMA6-207ENST00000554620 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
PSMA6-207ENST00000554620 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
PSMA6-207ENST00000554620 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
PSMA6-207ENST00000554620 EP400Q96L91 3159 aa13.34□□□□□ -0.27
PSMA6-207ENST00000554620 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
PSMA6-207ENST00000554620 SPATA31A6Q5VVP1 1343 aa13.31□□□□□ -0.28
PSMA6-207ENST00000554620 KIF14Q15058 1648 aa13.31□□□□□ -0.28
PSMA6-207ENST00000554620 UGGT1Q9NYU2 1555 aa13.3□□□□□ -0.28
PSMA6-207ENST00000554620 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
PSMA6-207ENST00000554620 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
PSMA6-207ENST00000554620 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
PSMA6-207ENST00000554620 TNRQ92752 1358 aa13.29□□□□□ -0.28
PSMA6-207ENST00000554620 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
PSMA6-207ENST00000554620 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
PSMA6-207ENST00000554620 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
PSMA6-207ENST00000554620 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
PSMA6-207ENST00000554620 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.28
PSMA6-207ENST00000554620 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
PSMA6-207ENST00000554620 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
PSMA6-207ENST00000554620 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
PSMA6-207ENST00000554620 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
PSMA6-207ENST00000554620 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
PSMA6-207ENST00000554620 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
PSMA6-207ENST00000554620 PZPP20742 1482 aa13.23□□□□□ -0.29
PSMA6-207ENST00000554620 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-207ENST00000554620 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-207ENST00000554620 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-207ENST00000554620 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
PSMA6-207ENST00000554620 YY1P25490 414 aa13.22□□□□□ -0.29
PSMA6-207ENST00000554620 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
PSMA6-207ENST00000554620 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
PSMA6-207ENST00000554620 A2MP01023 1474 aa13.2□□□□□ -0.3
PSMA6-207ENST00000554620 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
PSMA6-207ENST00000554620 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
PSMA6-207ENST00000554620 AFF2P51816 1311 aa13.18□□□□□ -0.3
PSMA6-207ENST00000554620 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
PSMA6-207ENST00000554620 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
PSMA6-207ENST00000554620 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
PSMA6-207ENST00000554620 GGT6Q6P531 493 aa13.16□□□□□ -0.3
PSMA6-207ENST00000554620 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
PSMA6-207ENST00000554620 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
PSMA6-207ENST00000554620 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
PSMA6-207ENST00000554620 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
PSMA6-207ENST00000554620 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
PSMA6-207ENST00000554620 ABCC3O15438 1527 aa13.14□□□□□ -0.31
PSMA6-207ENST00000554620 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
PSMA6-207ENST00000554620 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
PSMA6-207ENST00000554620 EEA1Q15075 1411 aa13.13□□□□□ -0.31
PSMA6-207ENST00000554620 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
PSMA6-207ENST00000554620 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
PSMA6-207ENST00000554620 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
PSMA6-207ENST00000554620 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
PSMA6-207ENST00000554620 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
PSMA6-207ENST00000554620 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
PSMA6-207ENST00000554620 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
PSMA6-207ENST00000554620 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
PSMA6-207ENST00000554620 CLIP1P30622 1438 aa13.09□□□□□ -0.31
PSMA6-207ENST00000554620 QTRT2Q9H974 415 aaKnown RBP13.09□□□□□ -0.31
PSMA6-207ENST00000554620 SLIT1O75093 1534 aa13.08□□□□□ -0.31
PSMA6-207ENST00000554620 MSH6P52701 1360 aa13.08□□□□□ -0.31
PSMA6-207ENST00000554620 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
PSMA6-207ENST00000554620 NGLY1Q96IV0 654 aa13.08□□□□□ -0.32
PSMA6-207ENST00000554620 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
PSMA6-207ENST00000554620 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
PSMA6-207ENST00000554620 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
PSMA6-207ENST00000554620 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
PSMA6-207ENST00000554620 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
PSMA6-207ENST00000554620 HRCP23327 699 aa13.04□□□□□ -0.32
PSMA6-207ENST00000554620 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
PSMA6-207ENST00000554620 KCNA6P17658 529 aa13.01□□□□□ -0.33
PSMA6-207ENST00000554620 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
PSMA6-207ENST00000554620 LTKP29376 864 aa13□□□□□ -0.33
PSMA6-207ENST00000554620 C8orf37Q96NL8 207 aa13□□□□□ -0.33
PSMA6-207ENST00000554620 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
PSMA6-207ENST00000554620 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
PSMA6-207ENST00000554620 UNC13BO14795 1591 aa12.98□□□□□ -0.33
PSMA6-207ENST00000554620 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
PSMA6-207ENST00000554620 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
PSMA6-207ENST00000554620 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
PSMA6-207ENST00000554620 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
PSMA6-207ENST00000554620 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
PSMA6-207ENST00000554620 TET3O43151 1660 aa12.96□□□□□ -0.33
PSMA6-207ENST00000554620 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
PSMA6-207ENST00000554620 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
PSMA6-207ENST00000554620 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
PSMA6-207ENST00000554620 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
PSMA6-207ENST00000554620 ATRNO75882 1429 aa12.95□□□□□ -0.34
PSMA6-207ENST00000554620 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
PSMA6-207ENST00000554620 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
PSMA6-207ENST00000554620 PLEKHH2Q8IVE3 1493 aa12.94□□□□□ -0.34
PSMA6-207ENST00000554620 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
PSMA6-207ENST00000554620 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
PSMA6-207ENST00000554620 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
PSMA6-207ENST00000554620 ZNF784Q8NCA9 323 aaPredicted RBP12.92□□□□□ -0.34
PSMA6-207ENST00000554620 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
PSMA6-207ENST00000554620 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
PSMA6-207ENST00000554620 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms