RNA–Protein interactions for RNA: ENST00000554609.5

AP4S1-206, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP4S1, Length 1,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-206ENST00000554609 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
AP4S1-206ENST00000554609 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
AP4S1-206ENST00000554609 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
AP4S1-206ENST00000554609 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
AP4S1-206ENST00000554609 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
AP4S1-206ENST00000554609 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
AP4S1-206ENST00000554609 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
AP4S1-206ENST00000554609 MYO3AQ8NEV4 1616 aa16.17■□□□□ 0.18
AP4S1-206ENST00000554609 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
AP4S1-206ENST00000554609 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
AP4S1-206ENST00000554609 PKD2Q13563 968 aa16.16■□□□□ 0.18
AP4S1-206ENST00000554609 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
AP4S1-206ENST00000554609 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
AP4S1-206ENST00000554609 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
AP4S1-206ENST00000554609 CEP170BQ9Y4F5 1589 aaPredicted RBP16.15■□□□□ 0.18
AP4S1-206ENST00000554609 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
AP4S1-206ENST00000554609 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.18
AP4S1-206ENST00000554609 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
AP4S1-206ENST00000554609 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
AP4S1-206ENST00000554609 HSPA1LP34931 641 aa16.13■□□□□ 0.17
AP4S1-206ENST00000554609 GGT6Q6P531 493 aa16.13■□□□□ 0.17
AP4S1-206ENST00000554609 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
AP4S1-206ENST00000554609 A2MP01023 1474 aa16.11■□□□□ 0.17
AP4S1-206ENST00000554609 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
AP4S1-206ENST00000554609 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
AP4S1-206ENST00000554609 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
AP4S1-206ENST00000554609 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
AP4S1-206ENST00000554609 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
AP4S1-206ENST00000554609 POTEHQ6S545 545 aa16.08■□□□□ 0.16
AP4S1-206ENST00000554609 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
AP4S1-206ENST00000554609 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
AP4S1-206ENST00000554609 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
AP4S1-206ENST00000554609 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
AP4S1-206ENST00000554609 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
AP4S1-206ENST00000554609 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
AP4S1-206ENST00000554609 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
AP4S1-206ENST00000554609 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
AP4S1-206ENST00000554609 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
AP4S1-206ENST00000554609 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.16
AP4S1-206ENST00000554609 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
AP4S1-206ENST00000554609 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
AP4S1-206ENST00000554609 TOM1O60784 492 aa16.02■□□□□ 0.16
AP4S1-206ENST00000554609 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
AP4S1-206ENST00000554609 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
AP4S1-206ENST00000554609 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
AP4S1-206ENST00000554609 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
AP4S1-206ENST00000554609 CPS1P31327 1500 aa16■□□□□ 0.15
AP4S1-206ENST00000554609 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
AP4S1-206ENST00000554609 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
AP4S1-206ENST00000554609 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
AP4S1-206ENST00000554609 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
AP4S1-206ENST00000554609 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
AP4S1-206ENST00000554609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
AP4S1-206ENST00000554609 TNRQ92752 1358 aa15.97■□□□□ 0.15
AP4S1-206ENST00000554609 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.15
AP4S1-206ENST00000554609 KIF3BO15066 747 aa15.95■□□□□ 0.14
AP4S1-206ENST00000554609 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
AP4S1-206ENST00000554609 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
AP4S1-206ENST00000554609 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
AP4S1-206ENST00000554609 PZPP20742 1482 aa15.94■□□□□ 0.14
AP4S1-206ENST00000554609 MED14O60244 1454 aa15.92■□□□□ 0.14
AP4S1-206ENST00000554609 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
AP4S1-206ENST00000554609 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
AP4S1-206ENST00000554609 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
AP4S1-206ENST00000554609 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
AP4S1-206ENST00000554609 RGS17Q9UGC6 210 aaPredicted RBP15.91■□□□□ 0.14
AP4S1-206ENST00000554609 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
AP4S1-206ENST00000554609 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
AP4S1-206ENST00000554609 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
AP4S1-206ENST00000554609 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
AP4S1-206ENST00000554609 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
AP4S1-206ENST00000554609 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
AP4S1-206ENST00000554609 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
AP4S1-206ENST00000554609 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
AP4S1-206ENST00000554609 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
AP4S1-206ENST00000554609 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
AP4S1-206ENST00000554609 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
AP4S1-206ENST00000554609 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
AP4S1-206ENST00000554609 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
AP4S1-206ENST00000554609 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.13
AP4S1-206ENST00000554609 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
AP4S1-206ENST00000554609 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
AP4S1-206ENST00000554609 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
AP4S1-206ENST00000554609 RNF17Q9BXT8 1623 aaKnown RBP15.81■□□□□ 0.12
AP4S1-206ENST00000554609 CFAP65Q6ZU64 1925 aaKnown RBP15.79■□□□□ 0.12
AP4S1-206ENST00000554609 LTKP29376 864 aa15.79■□□□□ 0.12
AP4S1-206ENST00000554609 ABCC3O15438 1527 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 UBR1Q8IWV7 1749 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 RSPH4AQ5TD94 716 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 POTEAQ6S8J7 498 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 SYNMO15061 1565 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
AP4S1-206ENST00000554609 MROH1Q8NDA8 1641 aa15.76■□□□□ 0.11
AP4S1-206ENST00000554609 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
AP4S1-206ENST00000554609 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
AP4S1-206ENST00000554609 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
AP4S1-206ENST00000554609 CEP152O94986 1710 aa15.74■□□□□ 0.11
AP4S1-206ENST00000554609 ARHGAP23Q9P227 1491 aa15.73■□□□□ 0.11
AP4S1-206ENST00000554609 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms