RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 MROH1Q8NDA8 1641 aa19.32■□□□□ 0.68
ITGA7-210ENST00000554543 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
ITGA7-210ENST00000554543 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
ITGA7-210ENST00000554543 PTPRKQ15262 1439 aa19.3■□□□□ 0.68
ITGA7-210ENST00000554543 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
ITGA7-210ENST00000554543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
ITGA7-210ENST00000554543 KDM5DQ9BY66 1539 aa19.29■□□□□ 0.68
ITGA7-210ENST00000554543 DUOX2Q9NRD8 1548 aa19.29■□□□□ 0.68
ITGA7-210ENST00000554543 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
ITGA7-210ENST00000554543 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
ITGA7-210ENST00000554543 SETD1BQ9UPS6 1966 aaKnown RBP19.27■□□□□ 0.68
ITGA7-210ENST00000554543 FBXO31Q5XUX0 539 aaPredicted RBP19.27■□□□□ 0.68
ITGA7-210ENST00000554543 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
ITGA7-210ENST00000554543 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
ITGA7-210ENST00000554543 ABCC3O15438 1527 aa19.25■□□□□ 0.67
ITGA7-210ENST00000554543 CAMSAP1Q5T5Y3 1602 aa19.24■□□□□ 0.67
ITGA7-210ENST00000554543 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
ITGA7-210ENST00000554543 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
ITGA7-210ENST00000554543 NCOA1Q15788 1441 aa19.21■□□□□ 0.67
ITGA7-210ENST00000554543 ZC3H13Q5T200 1668 aaKnown RBP19.2■□□□□ 0.66
ITGA7-210ENST00000554543 DEPDC5O75140 1603 aa19.2■□□□□ 0.66
ITGA7-210ENST00000554543 ERBINQ96RT1 1412 aa19.19■□□□□ 0.66
ITGA7-210ENST00000554543 ADGRL2O95490 1459 aa19.19■□□□□ 0.66
ITGA7-210ENST00000554543 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
ITGA7-210ENST00000554543 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
ITGA7-210ENST00000554543 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
ITGA7-210ENST00000554543 PZPP20742 1482 aa19.16■□□□□ 0.66
ITGA7-210ENST00000554543 NPATQ14207 1427 aa19.16■□□□□ 0.66
ITGA7-210ENST00000554543 TNRQ92752 1358 aa19.14■□□□□ 0.65
ITGA7-210ENST00000554543 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
ITGA7-210ENST00000554543 RRBP1Q9P2E9 1410 aaKnown RBP19.11■□□□□ 0.65
ITGA7-210ENST00000554543 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
ITGA7-210ENST00000554543 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
ITGA7-210ENST00000554543 ERVK-7P63135 1459 aa19.1■□□□□ 0.65
ITGA7-210ENST00000554543 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
ITGA7-210ENST00000554543 KANK1Q14678 1352 aa19.07■□□□□ 0.64
ITGA7-210ENST00000554543 UNC13BO14795 1591 aa19.07■□□□□ 0.64
ITGA7-210ENST00000554543 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
ITGA7-210ENST00000554543 VWDEQ8N2E2 1590 aa19.07■□□□□ 0.64
ITGA7-210ENST00000554543 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
ITGA7-210ENST00000554543 POLR1AO95602 1720 aaPredicted RBP19.06■□□□□ 0.64
ITGA7-210ENST00000554543 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
ITGA7-210ENST00000554543 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
ITGA7-210ENST00000554543 PIK3C2BO00750 1634 aa19.03■□□□□ 0.64
ITGA7-210ENST00000554543 UBR1Q8IWV7 1749 aa19.03■□□□□ 0.64
ITGA7-210ENST00000554543 SYNMO15061 1565 aa19.03■□□□□ 0.64
ITGA7-210ENST00000554543 MYO5BQ9ULV0 1848 aa19.03■□□□□ 0.64
ITGA7-210ENST00000554543 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
ITGA7-210ENST00000554543 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
ITGA7-210ENST00000554543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.64
ITGA7-210ENST00000554543 UGGT1Q9NYU2 1555 aa19.02■□□□□ 0.64
ITGA7-210ENST00000554543 E9PCH4 1651 aa19.02■□□□□ 0.64
ITGA7-210ENST00000554543 TET3O43151 1660 aa19.02■□□□□ 0.64
ITGA7-210ENST00000554543 IQGAP3Q86VI3 1631 aa19■□□□□ 0.63
ITGA7-210ENST00000554543 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
ITGA7-210ENST00000554543 NEURL4Q96JN8 1562 aa18.99■□□□□ 0.63
ITGA7-210ENST00000554543 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
ITGA7-210ENST00000554543 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
ITGA7-210ENST00000554543 NAIPQ13075 1403 aa18.97■□□□□ 0.63
ITGA7-210ENST00000554543 NUP155O75694 1391 aa18.96■□□□□ 0.63
ITGA7-210ENST00000554543 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
ITGA7-210ENST00000554543 PLA2R1Q13018 1463 aa18.94■□□□□ 0.62
ITGA7-210ENST00000554543 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
ITGA7-210ENST00000554543 PTPRTO14522 1441 aa18.92■□□□□ 0.62
ITGA7-210ENST00000554543 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
ITGA7-210ENST00000554543 IDI1Q13907 227 aa18.9■□□□□ 0.62
ITGA7-210ENST00000554543 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
ITGA7-210ENST00000554543 STAG3Q9UJ98 1225 aa18.9■□□□□ 0.62
ITGA7-210ENST00000554543 NOS1P29475 1434 aa18.9■□□□□ 0.62
ITGA7-210ENST00000554543 SPHKAPQ2M3C7 1700 aa18.89■□□□□ 0.61
ITGA7-210ENST00000554543 CHGAP10645 457 aaKnown RBP18.89■□□□□ 0.61
ITGA7-210ENST00000554543 THEMISQ8N1K5 641 aaPredicted RBP18.89■□□□□ 0.61
ITGA7-210ENST00000554543 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
ITGA7-210ENST00000554543 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
ITGA7-210ENST00000554543 LTBP4Q8N2S1 1624 aa18.88■□□□□ 0.61
ITGA7-210ENST00000554543 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
ITGA7-210ENST00000554543 PKD2Q13563 968 aa18.87■□□□□ 0.61
ITGA7-210ENST00000554543 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
ITGA7-210ENST00000554543 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
ITGA7-210ENST00000554543 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
ITGA7-210ENST00000554543 LTKP29376 864 aa18.86■□□□□ 0.61
ITGA7-210ENST00000554543 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
ITGA7-210ENST00000554543 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
ITGA7-210ENST00000554543 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
ITGA7-210ENST00000554543 TMEM131LA2VDJ0 1609 aa18.83■□□□□ 0.61
ITGA7-210ENST00000554543 FOXD1Q16676 465 aa18.83■□□□□ 0.6
ITGA7-210ENST00000554543 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.6
ITGA7-210ENST00000554543 SCAF11Q99590 1463 aaKnown RBP18.83■□□□□ 0.6
ITGA7-210ENST00000554543 CLTCL1P53675 1640 aa18.82■□□□□ 0.6
ITGA7-210ENST00000554543 SLIT1O75093 1534 aa18.8■□□□□ 0.6
ITGA7-210ENST00000554543 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
ITGA7-210ENST00000554543 TMEM2Q9UHN6 1383 aa18.79■□□□□ 0.6
ITGA7-210ENST00000554543 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
ITGA7-210ENST00000554543 BCANQ96GW7 911 aa18.77■□□□□ 0.6
ITGA7-210ENST00000554543 MED14O60244 1454 aa18.77■□□□□ 0.59
ITGA7-210ENST00000554543 FBXO41Q8TF61 875 aa18.76■□□□□ 0.59
ITGA7-210ENST00000554543 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
ITGA7-210ENST00000554543 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
ITGA7-210ENST00000554543 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
ITGA7-210ENST00000554543 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms