RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
TMEM253-203ENST00000554329 CEP152O94986 1710 aa17.95■□□□□ 0.46
TMEM253-203ENST00000554329 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
TMEM253-203ENST00000554329 ITGAEP38570 1179 aa17.93■□□□□ 0.46
TMEM253-203ENST00000554329 FBXO31Q5XUX0 539 aaPredicted RBP17.93■□□□□ 0.46
TMEM253-203ENST00000554329 SHANK2Q9UPX8 1470 aa17.93■□□□□ 0.46
TMEM253-203ENST00000554329 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
TMEM253-203ENST00000554329 RNF17Q9BXT8 1623 aaKnown RBP17.92■□□□□ 0.46
TMEM253-203ENST00000554329 MYO3AQ8NEV4 1616 aa17.91■□□□□ 0.46
TMEM253-203ENST00000554329 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
TMEM253-203ENST00000554329 DUOX2Q9NRD8 1548 aa17.91■□□□□ 0.46
TMEM253-203ENST00000554329 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
TMEM253-203ENST00000554329 STRCQ7RTU9 1775 aa17.9■□□□□ 0.46
TMEM253-203ENST00000554329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
TMEM253-203ENST00000554329 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
TMEM253-203ENST00000554329 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
TMEM253-203ENST00000554329 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
TMEM253-203ENST00000554329 ABCC3O15438 1527 aa17.88■□□□□ 0.45
TMEM253-203ENST00000554329 ANKRD30AQ9BXX3 1397 aa17.85■□□□□ 0.45
TMEM253-203ENST00000554329 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
TMEM253-203ENST00000554329 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
TMEM253-203ENST00000554329 NPATQ14207 1427 aa17.84■□□□□ 0.45
TMEM253-203ENST00000554329 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
TMEM253-203ENST00000554329 PZPP20742 1482 aa17.83■□□□□ 0.45
TMEM253-203ENST00000554329 ERBINQ96RT1 1412 aa17.83■□□□□ 0.45
TMEM253-203ENST00000554329 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
TMEM253-203ENST00000554329 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
TMEM253-203ENST00000554329 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
TMEM253-203ENST00000554329 TNRQ92752 1358 aa17.81■□□□□ 0.44
TMEM253-203ENST00000554329 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
TMEM253-203ENST00000554329 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
TMEM253-203ENST00000554329 PRDM15P57071 1507 aaPredicted RBP17.81■□□□□ 0.44
TMEM253-203ENST00000554329 DEPDC5O75140 1603 aa17.8■□□□□ 0.44
TMEM253-203ENST00000554329 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
TMEM253-203ENST00000554329 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
TMEM253-203ENST00000554329 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
TMEM253-203ENST00000554329 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
TMEM253-203ENST00000554329 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
TMEM253-203ENST00000554329 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
TMEM253-203ENST00000554329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMEM253-203ENST00000554329 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
TMEM253-203ENST00000554329 VWDEQ8N2E2 1590 aa17.71■□□□□ 0.43
TMEM253-203ENST00000554329 KANK1Q14678 1352 aa17.71■□□□□ 0.43
TMEM253-203ENST00000554329 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
TMEM253-203ENST00000554329 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
TMEM253-203ENST00000554329 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
TMEM253-203ENST00000554329 UNC13BO14795 1591 aa17.68■□□□□ 0.42
TMEM253-203ENST00000554329 SYNMO15061 1565 aa17.67■□□□□ 0.42
TMEM253-203ENST00000554329 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
TMEM253-203ENST00000554329 PIK3C2BO00750 1634 aa17.67■□□□□ 0.42
TMEM253-203ENST00000554329 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
TMEM253-203ENST00000554329 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
TMEM253-203ENST00000554329 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
TMEM253-203ENST00000554329 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
TMEM253-203ENST00000554329 PTPRTO14522 1441 aa17.65■□□□□ 0.42
TMEM253-203ENST00000554329 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
TMEM253-203ENST00000554329 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
TMEM253-203ENST00000554329 ARHGAP31Q2M1Z3 1444 aa17.64■□□□□ 0.41
TMEM253-203ENST00000554329 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
TMEM253-203ENST00000554329 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
TMEM253-203ENST00000554329 E9PCH4 1651 aa17.63■□□□□ 0.41
TMEM253-203ENST00000554329 TET3O43151 1660 aa17.63■□□□□ 0.41
TMEM253-203ENST00000554329 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
TMEM253-203ENST00000554329 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
TMEM253-203ENST00000554329 LTBP4Q8N2S1 1624 aa17.61■□□□□ 0.41
TMEM253-203ENST00000554329 NUP155O75694 1391 aa17.6■□□□□ 0.41
TMEM253-203ENST00000554329 MYO5BQ9ULV0 1848 aa17.6■□□□□ 0.41
TMEM253-203ENST00000554329 NAIPQ13075 1403 aa17.59■□□□□ 0.41
TMEM253-203ENST00000554329 PKD2Q13563 968 aa17.59■□□□□ 0.41
TMEM253-203ENST00000554329 IDI1Q13907 227 aa17.59■□□□□ 0.41
TMEM253-203ENST00000554329 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
TMEM253-203ENST00000554329 NOS1P29475 1434 aa17.57■□□□□ 0.4
TMEM253-203ENST00000554329 ANKLE2Q86XL3 938 aa17.57■□□□□ 0.4
TMEM253-203ENST00000554329 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
TMEM253-203ENST00000554329 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
TMEM253-203ENST00000554329 LTKP29376 864 aa17.56■□□□□ 0.4
TMEM253-203ENST00000554329 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
TMEM253-203ENST00000554329 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
TMEM253-203ENST00000554329 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
TMEM253-203ENST00000554329 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
TMEM253-203ENST00000554329 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
TMEM253-203ENST00000554329 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
TMEM253-203ENST00000554329 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
TMEM253-203ENST00000554329 STRCP1A6NGW2 1772 aa17.52■□□□□ 0.4
TMEM253-203ENST00000554329 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
TMEM253-203ENST00000554329 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
TMEM253-203ENST00000554329 ARHGAP23Q9P227 1491 aa17.5■□□□□ 0.39
TMEM253-203ENST00000554329 SLIT1O75093 1534 aa17.5■□□□□ 0.39
TMEM253-203ENST00000554329 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
TMEM253-203ENST00000554329 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
TMEM253-203ENST00000554329 SPHKAPQ2M3C7 1700 aa17.49■□□□□ 0.39
TMEM253-203ENST00000554329 MED14O60244 1454 aa17.49■□□□□ 0.39
TMEM253-203ENST00000554329 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
TMEM253-203ENST00000554329 FOXD1Q16676 465 aa17.47■□□□□ 0.39
TMEM253-203ENST00000554329 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
TMEM253-203ENST00000554329 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
TMEM253-203ENST00000554329 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
TMEM253-203ENST00000554329 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
TMEM253-203ENST00000554329 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
TMEM253-203ENST00000554329 BCANQ96GW7 911 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms