RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
SHMT2-211ENST00000554310 KIF3BO15066 747 aa20.23■□□□□ 0.83
SHMT2-211ENST00000554310 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
SHMT2-211ENST00000554310 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
SHMT2-211ENST00000554310 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
SHMT2-211ENST00000554310 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
SHMT2-211ENST00000554310 MROH1Q8NDA8 1641 aa20.19■□□□□ 0.82
SHMT2-211ENST00000554310 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
SHMT2-211ENST00000554310 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
SHMT2-211ENST00000554310 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
SHMT2-211ENST00000554310 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
SHMT2-211ENST00000554310 HSPA2P54652 639 aa20.17■□□□□ 0.82
SHMT2-211ENST00000554310 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
SHMT2-211ENST00000554310 ABCC3O15438 1527 aa20.16■□□□□ 0.82
SHMT2-211ENST00000554310 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
SHMT2-211ENST00000554310 PZPP20742 1482 aa20.15■□□□□ 0.82
SHMT2-211ENST00000554310 DEPDC5O75140 1603 aa20.15■□□□□ 0.82
SHMT2-211ENST00000554310 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
SHMT2-211ENST00000554310 WASHC2CQ9Y4E1 1318 aa20.13■□□□□ 0.81
SHMT2-211ENST00000554310 NCOA1Q15788 1441 aa20.12■□□□□ 0.81
SHMT2-211ENST00000554310 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
SHMT2-211ENST00000554310 CEP152O94986 1710 aa20.11■□□□□ 0.81
SHMT2-211ENST00000554310 RRP7BPQ9NSQ0 103 aa20.11■□□□□ 0.81
SHMT2-211ENST00000554310 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
SHMT2-211ENST00000554310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHMT2-211ENST00000554310 STRCQ7RTU9 1775 aa20.09■□□□□ 0.81
SHMT2-211ENST00000554310 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
SHMT2-211ENST00000554310 TNRQ92752 1358 aa20.06■□□□□ 0.8
SHMT2-211ENST00000554310 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
SHMT2-211ENST00000554310 SPATA31D1Q6ZQQ2 1576 aa20.04■□□□□ 0.8
SHMT2-211ENST00000554310 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
SHMT2-211ENST00000554310 PPARGC1BQ86YN6 1023 aaKnown RBP20.04■□□□□ 0.8
SHMT2-211ENST00000554310 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
SHMT2-211ENST00000554310 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
SHMT2-211ENST00000554310 KANK1Q14678 1352 aa20.03■□□□□ 0.8
SHMT2-211ENST00000554310 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
SHMT2-211ENST00000554310 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
SHMT2-211ENST00000554310 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.8
SHMT2-211ENST00000554310 NLRP1Q9C000 1473 aa20.02■□□□□ 0.8
SHMT2-211ENST00000554310 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
SHMT2-211ENST00000554310 ARHGAP31Q2M1Z3 1444 aa20.01■□□□□ 0.79
SHMT2-211ENST00000554310 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
SHMT2-211ENST00000554310 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
SHMT2-211ENST00000554310 UNC13BO14795 1591 aa19.99■□□□□ 0.79
SHMT2-211ENST00000554310 PTPRTO14522 1441 aa19.98■□□□□ 0.79
SHMT2-211ENST00000554310 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
SHMT2-211ENST00000554310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
SHMT2-211ENST00000554310 POLR1AO95602 1720 aaPredicted RBP19.95■□□□□ 0.78
SHMT2-211ENST00000554310 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
SHMT2-211ENST00000554310 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
SHMT2-211ENST00000554310 TET3O43151 1660 aa19.93■□□□□ 0.78
SHMT2-211ENST00000554310 GCC2Q8IWJ2 1684 aa19.91■□□□□ 0.78
SHMT2-211ENST00000554310 PKD2Q13563 968 aa19.91■□□□□ 0.78
SHMT2-211ENST00000554310 ITGAEP38570 1179 aa19.9■□□□□ 0.78
SHMT2-211ENST00000554310 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
SHMT2-211ENST00000554310 IQGAP3Q86VI3 1631 aa19.9■□□□□ 0.78
SHMT2-211ENST00000554310 UBR1Q8IWV7 1749 aa19.89■□□□□ 0.77
SHMT2-211ENST00000554310 NEURL4Q96JN8 1562 aa19.87■□□□□ 0.77
SHMT2-211ENST00000554310 KDM5AP29375 1690 aaKnown RBP19.87■□□□□ 0.77
SHMT2-211ENST00000554310 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
SHMT2-211ENST00000554310 THEMISQ8N1K5 641 aaPredicted RBP19.86■□□□□ 0.77
SHMT2-211ENST00000554310 SYNMO15061 1565 aa19.86■□□□□ 0.77
SHMT2-211ENST00000554310 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
SHMT2-211ENST00000554310 NOS1P29475 1434 aa19.85■□□□□ 0.77
SHMT2-211ENST00000554310 E9PCH4 1651 aa19.82■□□□□ 0.76
SHMT2-211ENST00000554310 MED14O60244 1454 aa19.81■□□□□ 0.76
SHMT2-211ENST00000554310 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
SHMT2-211ENST00000554310 NAIPQ13075 1403 aa19.8■□□□□ 0.76
SHMT2-211ENST00000554310 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
SHMT2-211ENST00000554310 SLIT1O75093 1534 aa19.8■□□□□ 0.76
SHMT2-211ENST00000554310 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
SHMT2-211ENST00000554310 ANKLE2Q86XL3 938 aa19.79■□□□□ 0.76
SHMT2-211ENST00000554310 CERKQ8TCT0 537 aa19.79■□□□□ 0.76
SHMT2-211ENST00000554310 ADGRB3O60242 1522 aa19.79■□□□□ 0.76
SHMT2-211ENST00000554310 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
SHMT2-211ENST00000554310 FBXO41Q8TF61 875 aa19.78■□□□□ 0.76
SHMT2-211ENST00000554310 NUP155O75694 1391 aa19.78■□□□□ 0.76
SHMT2-211ENST00000554310 NPHP4O75161 1426 aaPredicted RBP19.77■□□□□ 0.76
SHMT2-211ENST00000554310 SCAF11Q99590 1463 aaKnown RBP19.76■□□□□ 0.75
SHMT2-211ENST00000554310 IQSEC2Q5JU85 1478 aa19.75■□□□□ 0.75
SHMT2-211ENST00000554310 SLC52A1Q9NWF4 448 aa19.74■□□□□ 0.75
SHMT2-211ENST00000554310 TMEM2Q9UHN6 1383 aa19.72■□□□□ 0.75
SHMT2-211ENST00000554310 IDI1Q13907 227 aa19.72■□□□□ 0.75
SHMT2-211ENST00000554310 ZNF335Q9H4Z2 1342 aaPredicted RBP19.72■□□□□ 0.75
SHMT2-211ENST00000554310 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
SHMT2-211ENST00000554310 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
SHMT2-211ENST00000554310 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
SHMT2-211ENST00000554310 CPS1P31327 1500 aa19.69■□□□□ 0.74
SHMT2-211ENST00000554310 MYO5BQ9ULV0 1848 aa19.69■□□□□ 0.74
SHMT2-211ENST00000554310 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
SHMT2-211ENST00000554310 LTKP29376 864 aa19.65■□□□□ 0.74
SHMT2-211ENST00000554310 TXNDC2Q86VQ3 553 aa19.65■□□□□ 0.74
SHMT2-211ENST00000554310 TRPM2O94759 1503 aa19.64■□□□□ 0.73
SHMT2-211ENST00000554310 ZFYVE9O95405 1425 aa19.63■□□□□ 0.73
SHMT2-211ENST00000554310 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
SHMT2-211ENST00000554310 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
SHMT2-211ENST00000554310 CLTCL1P53675 1640 aa19.58■□□□□ 0.73
SHMT2-211ENST00000554310 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
SHMT2-211ENST00000554310 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
SHMT2-211ENST00000554310 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms