RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 PZPP20742 1482 aa22.6■■□□□ 1.21
NEDD1-206ENST00000554226 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
NEDD1-206ENST00000554226 TOM1O60784 492 aa22.6■■□□□ 1.21
NEDD1-206ENST00000554226 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
NEDD1-206ENST00000554226 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
NEDD1-206ENST00000554226 DHX29Q7Z478 1369 aaKnown RBP22.6■■□□□ 1.21
NEDD1-206ENST00000554226 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
NEDD1-206ENST00000554226 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
NEDD1-206ENST00000554226 KDM5DQ9BY66 1539 aa22.59■■□□□ 1.21
NEDD1-206ENST00000554226 DEPDC5O75140 1603 aa22.57■■□□□ 1.2
NEDD1-206ENST00000554226 TNRQ92752 1358 aa22.56■■□□□ 1.2
NEDD1-206ENST00000554226 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
NEDD1-206ENST00000554226 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
NEDD1-206ENST00000554226 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
NEDD1-206ENST00000554226 MED14O60244 1454 aa22.54■■□□□ 1.2
NEDD1-206ENST00000554226 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
NEDD1-206ENST00000554226 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
NEDD1-206ENST00000554226 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.2
NEDD1-206ENST00000554226 FBXO31Q5XUX0 539 aaPredicted RBP22.49■■□□□ 1.19
NEDD1-206ENST00000554226 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
NEDD1-206ENST00000554226 UGGT1Q9NYU2 1555 aa22.48■■□□□ 1.19
NEDD1-206ENST00000554226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.48■■□□□ 1.19
NEDD1-206ENST00000554226 RSPH4AQ5TD94 716 aa22.47■■□□□ 1.19
NEDD1-206ENST00000554226 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
NEDD1-206ENST00000554226 ARHGEF5Q12774 1597 aa22.46■■□□□ 1.19
NEDD1-206ENST00000554226 IQGAP1P46940 1657 aa22.46■■□□□ 1.19
NEDD1-206ENST00000554226 KIF3BO15066 747 aa22.46■■□□□ 1.19
NEDD1-206ENST00000554226 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
NEDD1-206ENST00000554226 THEMISQ8N1K5 641 aaPredicted RBP22.46■■□□□ 1.19
NEDD1-206ENST00000554226 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
NEDD1-206ENST00000554226 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.18
NEDD1-206ENST00000554226 RNF17Q9BXT8 1623 aaKnown RBP22.45■■□□□ 1.18
NEDD1-206ENST00000554226 ZC3H13Q5T200 1668 aaKnown RBP22.45■■□□□ 1.18
NEDD1-206ENST00000554226 SYNMO15061 1565 aa22.43■■□□□ 1.18
NEDD1-206ENST00000554226 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
NEDD1-206ENST00000554226 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
NEDD1-206ENST00000554226 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
NEDD1-206ENST00000554226 LRRC7Q96NW7 1537 aa22.38■■□□□ 1.17
NEDD1-206ENST00000554226 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
NEDD1-206ENST00000554226 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
NEDD1-206ENST00000554226 ABCC3O15438 1527 aa22.37■■□□□ 1.17
NEDD1-206ENST00000554226 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
NEDD1-206ENST00000554226 UBR1Q8IWV7 1749 aa22.33■■□□□ 1.17
NEDD1-206ENST00000554226 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
NEDD1-206ENST00000554226 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
NEDD1-206ENST00000554226 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
NEDD1-206ENST00000554226 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
NEDD1-206ENST00000554226 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
NEDD1-206ENST00000554226 ARHGAP23Q9P227 1491 aa22.28■■□□□ 1.16
NEDD1-206ENST00000554226 SLIT1O75093 1534 aa22.27■■□□□ 1.16
NEDD1-206ENST00000554226 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
NEDD1-206ENST00000554226 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
NEDD1-206ENST00000554226 CEP152O94986 1710 aa22.26■■□□□ 1.15
NEDD1-206ENST00000554226 ARHGAP31Q2M1Z3 1444 aa22.23■■□□□ 1.15
NEDD1-206ENST00000554226 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
NEDD1-206ENST00000554226 LRRC9Q6ZRR7 1453 aa22.21■■□□□ 1.15
NEDD1-206ENST00000554226 DUOX2Q9NRD8 1548 aa22.2■■□□□ 1.14
NEDD1-206ENST00000554226 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.14
NEDD1-206ENST00000554226 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
NEDD1-206ENST00000554226 MAP3K1Q13233 1512 aa22.16■■□□□ 1.14
NEDD1-206ENST00000554226 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
NEDD1-206ENST00000554226 LTKP29376 864 aa22.15■■□□□ 1.14
NEDD1-206ENST00000554226 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.13
NEDD1-206ENST00000554226 PIK3C2BO00750 1634 aa22.13■■□□□ 1.13
NEDD1-206ENST00000554226 ERBINQ96RT1 1412 aa22.13■■□□□ 1.13
NEDD1-206ENST00000554226 CROCC2H7BZ55 1655 aa22.12■■□□□ 1.13
NEDD1-206ENST00000554226 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
NEDD1-206ENST00000554226 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
NEDD1-206ENST00000554226 TXNDC2Q86VQ3 553 aa22.11■■□□□ 1.13
NEDD1-206ENST00000554226 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
NEDD1-206ENST00000554226 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
NEDD1-206ENST00000554226 TET3O43151 1660 aa22.07■■□□□ 1.12
NEDD1-206ENST00000554226 LMTK2Q8IWU2 1503 aa22.06■■□□□ 1.12
NEDD1-206ENST00000554226 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
NEDD1-206ENST00000554226 EFCAB6Q5THR3 1501 aa22.06■■□□□ 1.12
NEDD1-206ENST00000554226 ROBO1Q9Y6N7 1651 aa22.05■■□□□ 1.12
NEDD1-206ENST00000554226 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
NEDD1-206ENST00000554226 TMEM94Q12767 1356 aa22.04■■□□□ 1.12
NEDD1-206ENST00000554226 NKTRP30414 1462 aaKnown RBP22.03■■□□□ 1.12
NEDD1-206ENST00000554226 ABCC5O15440 1437 aa22.01■■□□□ 1.11
NEDD1-206ENST00000554226 KCNA6P17658 529 aa22■■□□□ 1.11
NEDD1-206ENST00000554226 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
NEDD1-206ENST00000554226 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
NEDD1-206ENST00000554226 NOS1P29475 1434 aa21.97■■□□□ 1.11
NEDD1-206ENST00000554226 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
NEDD1-206ENST00000554226 ADGRB3O60242 1522 aa21.97■■□□□ 1.11
NEDD1-206ENST00000554226 KANK1Q14678 1352 aa21.97■■□□□ 1.11
NEDD1-206ENST00000554226 IDI1Q13907 227 aa21.95■■□□□ 1.1
NEDD1-206ENST00000554226 DAPK1P53355 1430 aa21.95■■□□□ 1.1
NEDD1-206ENST00000554226 PROSER2Q86WR7 435 aaPredicted RBP21.93■■□□□ 1.1
NEDD1-206ENST00000554226 RRP7BPQ9NSQ0 103 aa21.92■■□□□ 1.1
NEDD1-206ENST00000554226 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
NEDD1-206ENST00000554226 PHLPP1O60346 1717 aa21.92■■□□□ 1.1
NEDD1-206ENST00000554226 JCADQ9P266 1359 aa21.91■■□□□ 1.1
NEDD1-206ENST00000554226 RBM33Q96EV2 1170 aaKnown RBP21.91■■□□□ 1.1
NEDD1-206ENST00000554226 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
NEDD1-206ENST00000554226 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
NEDD1-206ENST00000554226 RPRD2Q5VT52 1461 aaKnown RBP21.9■■□□□ 1.1
NEDD1-206ENST00000554226 MSH6P52701 1360 aa21.88■■□□□ 1.09
NEDD1-206ENST00000554226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms