RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
TRAPPC6B-204ENST00000554018 CERKQ8TCT0 537 aa18.61■□□□□ 0.57
TRAPPC6B-204ENST00000554018 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC6B-204ENST00000554018 PTPRTO14522 1441 aa18.6■□□□□ 0.57
TRAPPC6B-204ENST00000554018 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
TRAPPC6B-204ENST00000554018 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
TRAPPC6B-204ENST00000554018 FBXO31Q5XUX0 539 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC6B-204ENST00000554018 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
TRAPPC6B-204ENST00000554018 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
TRAPPC6B-204ENST00000554018 CFAP65Q6ZU64 1925 aaKnown RBP18.58■□□□□ 0.56
TRAPPC6B-204ENST00000554018 ABCC5O15440 1437 aa18.57■□□□□ 0.56
TRAPPC6B-204ENST00000554018 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
TRAPPC6B-204ENST00000554018 EIF2AK4Q9P2K8 1649 aaKnown RBP18.57■□□□□ 0.56
TRAPPC6B-204ENST00000554018 NCKAP5LQ9HCH0 1330 aa18.56■□□□□ 0.56
TRAPPC6B-204ENST00000554018 PZPP20742 1482 aa18.56■□□□□ 0.56
TRAPPC6B-204ENST00000554018 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
TRAPPC6B-204ENST00000554018 TNRQ92752 1358 aa18.55■□□□□ 0.56
TRAPPC6B-204ENST00000554018 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
TRAPPC6B-204ENST00000554018 A2ML1A8K2U0 1454 aa18.54■□□□□ 0.56
TRAPPC6B-204ENST00000554018 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
TRAPPC6B-204ENST00000554018 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
TRAPPC6B-204ENST00000554018 SHANK2Q9UPX8 1470 aa18.53■□□□□ 0.56
TRAPPC6B-204ENST00000554018 CEP152O94986 1710 aa18.53■□□□□ 0.56
TRAPPC6B-204ENST00000554018 DAPK1P53355 1430 aa18.53■□□□□ 0.56
TRAPPC6B-204ENST00000554018 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
TRAPPC6B-204ENST00000554018 ABCC3O15438 1527 aa18.53■□□□□ 0.56
TRAPPC6B-204ENST00000554018 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
TRAPPC6B-204ENST00000554018 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
TRAPPC6B-204ENST00000554018 PLA2R1Q13018 1463 aa18.52■□□□□ 0.55
TRAPPC6B-204ENST00000554018 PKD2Q13563 968 aa18.49■□□□□ 0.55
TRAPPC6B-204ENST00000554018 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
TRAPPC6B-204ENST00000554018 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
TRAPPC6B-204ENST00000554018 POLR1AO95602 1720 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC6B-204ENST00000554018 ERBINQ96RT1 1412 aa18.46■□□□□ 0.55
TRAPPC6B-204ENST00000554018 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
TRAPPC6B-204ENST00000554018 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC6B-204ENST00000554018 SPATA31D1Q6ZQQ2 1576 aa18.44■□□□□ 0.54
TRAPPC6B-204ENST00000554018 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
TRAPPC6B-204ENST00000554018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRAPPC6B-204ENST00000554018 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
TRAPPC6B-204ENST00000554018 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
TRAPPC6B-204ENST00000554018 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
TRAPPC6B-204ENST00000554018 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC6B-204ENST00000554018 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
TRAPPC6B-204ENST00000554018 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
TRAPPC6B-204ENST00000554018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRAPPC6B-204ENST00000554018 THEMISQ8N1K5 641 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC6B-204ENST00000554018 ADGRL2O95490 1459 aa18.39■□□□□ 0.53
TRAPPC6B-204ENST00000554018 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
TRAPPC6B-204ENST00000554018 KANK1Q14678 1352 aa18.37■□□□□ 0.53
TRAPPC6B-204ENST00000554018 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
TRAPPC6B-204ENST00000554018 IQSEC2Q5JU85 1478 aa18.37■□□□□ 0.53
TRAPPC6B-204ENST00000554018 UBR1Q8IWV7 1749 aa18.37■□□□□ 0.53
TRAPPC6B-204ENST00000554018 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
TRAPPC6B-204ENST00000554018 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
TRAPPC6B-204ENST00000554018 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
TRAPPC6B-204ENST00000554018 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC6B-204ENST00000554018 IQGAP1P46940 1657 aa18.32■□□□□ 0.52
TRAPPC6B-204ENST00000554018 MED14O60244 1454 aa18.32■□□□□ 0.52
TRAPPC6B-204ENST00000554018 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
TRAPPC6B-204ENST00000554018 PIK3C2BO00750 1634 aa18.31■□□□□ 0.52
TRAPPC6B-204ENST00000554018 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
TRAPPC6B-204ENST00000554018 SYNMO15061 1565 aa18.27■□□□□ 0.52
TRAPPC6B-204ENST00000554018 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.52
TRAPPC6B-204ENST00000554018 CPS1P31327 1500 aa18.26■□□□□ 0.51
TRAPPC6B-204ENST00000554018 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
TRAPPC6B-204ENST00000554018 SLIT1O75093 1534 aa18.25■□□□□ 0.51
TRAPPC6B-204ENST00000554018 LTKP29376 864 aa18.25■□□□□ 0.51
TRAPPC6B-204ENST00000554018 ITGAEP38570 1179 aa18.25■□□□□ 0.51
TRAPPC6B-204ENST00000554018 IDI1Q13907 227 aa18.25■□□□□ 0.51
TRAPPC6B-204ENST00000554018 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
TRAPPC6B-204ENST00000554018 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
TRAPPC6B-204ENST00000554018 ROCK1Q13464 1354 aa18.24■□□□□ 0.51
TRAPPC6B-204ENST00000554018 SCAF11Q99590 1463 aaKnown RBP18.24■□□□□ 0.51
TRAPPC6B-204ENST00000554018 TET3O43151 1660 aa18.24■□□□□ 0.51
TRAPPC6B-204ENST00000554018 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
TRAPPC6B-204ENST00000554018 UNC13BO14795 1591 aa18.23■□□□□ 0.51
TRAPPC6B-204ENST00000554018 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
TRAPPC6B-204ENST00000554018 NOS1P29475 1434 aa18.23■□□□□ 0.51
TRAPPC6B-204ENST00000554018 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
TRAPPC6B-204ENST00000554018 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
TRAPPC6B-204ENST00000554018 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
TRAPPC6B-204ENST00000554018 EID1Q9Y6B2 187 aa18.2■□□□□ 0.5
TRAPPC6B-204ENST00000554018 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
TRAPPC6B-204ENST00000554018 E9PCH4 1651 aa18.18■□□□□ 0.5
TRAPPC6B-204ENST00000554018 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
TRAPPC6B-204ENST00000554018 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
TRAPPC6B-204ENST00000554018 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
TRAPPC6B-204ENST00000554018 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
TRAPPC6B-204ENST00000554018 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
TRAPPC6B-204ENST00000554018 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
TRAPPC6B-204ENST00000554018 TOM1O60784 492 aa18.13■□□□□ 0.49
TRAPPC6B-204ENST00000554018 NUP155O75694 1391 aa18.13■□□□□ 0.49
TRAPPC6B-204ENST00000554018 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
TRAPPC6B-204ENST00000554018 RRBP1Q9P2E9 1410 aaKnown RBP18.12■□□□□ 0.49
TRAPPC6B-204ENST00000554018 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
TRAPPC6B-204ENST00000554018 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
TRAPPC6B-204ENST00000554018 DISP3Q9P2K9 1392 aa18.1■□□□□ 0.49
TRAPPC6B-204ENST00000554018 SLC26A8Q96RN1 970 aa18.09■□□□□ 0.49
TRAPPC6B-204ENST00000554018 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms