RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
HNRNPC-208ENST00000553753 WASHC2CQ9Y4E1 1318 aa15.73■□□□□ 0.11
HNRNPC-208ENST00000553753 CHIC2Q9UKJ5 165 aa15.73■□□□□ 0.11
HNRNPC-208ENST00000553753 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
HNRNPC-208ENST00000553753 NPATQ14207 1427 aa15.72■□□□□ 0.11
HNRNPC-208ENST00000553753 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.1
HNRNPC-208ENST00000553753 KDM5DQ9BY66 1539 aa15.7■□□□□ 0.1
HNRNPC-208ENST00000553753 FAM135AQ9P2D6 1515 aa15.7■□□□□ 0.1
HNRNPC-208ENST00000553753 EIF2AK4Q9P2K8 1649 aaKnown RBP15.7■□□□□ 0.1
HNRNPC-208ENST00000553753 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
HNRNPC-208ENST00000553753 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
HNRNPC-208ENST00000553753 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
HNRNPC-208ENST00000553753 RNF17Q9BXT8 1623 aaKnown RBP15.68■□□□□ 0.1
HNRNPC-208ENST00000553753 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
HNRNPC-208ENST00000553753 FBXO31Q5XUX0 539 aaPredicted RBP15.65■□□□□ 0.1
HNRNPC-208ENST00000553753 PZPP20742 1482 aa15.64■□□□□ 0.09
HNRNPC-208ENST00000553753 MROH1Q8NDA8 1641 aa15.63■□□□□ 0.09
HNRNPC-208ENST00000553753 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.63■□□□□ 0.092e-10■□□□□ 8.9
HNRNPC-208ENST00000553753 ABCC3O15438 1527 aa15.63■□□□□ 0.09
HNRNPC-208ENST00000553753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.092e-26■■□□□ 11.8
HNRNPC-208ENST00000553753 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
HNRNPC-208ENST00000553753 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
HNRNPC-208ENST00000553753 ITGAEP38570 1179 aa15.6■□□□□ 0.09
HNRNPC-208ENST00000553753 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
HNRNPC-208ENST00000553753 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
HNRNPC-208ENST00000553753 TNRQ92752 1358 aa15.6■□□□□ 0.09
HNRNPC-208ENST00000553753 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 KANK1Q14678 1352 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 STRCQ7RTU9 1775 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 ROCK1Q13464 1354 aa15.59■□□□□ 0.09
HNRNPC-208ENST00000553753 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.09
HNRNPC-208ENST00000553753 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
HNRNPC-208ENST00000553753 ZNF142P52746 1687 aaPredicted RBP15.57■□□□□ 0.08
HNRNPC-208ENST00000553753 CEP152O94986 1710 aa15.57■□□□□ 0.08
HNRNPC-208ENST00000553753 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
HNRNPC-208ENST00000553753 A2ML1A8K2U0 1454 aa15.56■□□□□ 0.08
HNRNPC-208ENST00000553753 ARHGAP31Q2M1Z3 1444 aa15.55■□□□□ 0.08
HNRNPC-208ENST00000553753 NLRP1Q9C000 1473 aa15.54■□□□□ 0.08
HNRNPC-208ENST00000553753 SPATA31D1Q6ZQQ2 1576 aa15.54■□□□□ 0.08
HNRNPC-208ENST00000553753 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
HNRNPC-208ENST00000553753 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
HNRNPC-208ENST00000553753 VWDEQ8N2E2 1590 aa15.53■□□□□ 0.08
HNRNPC-208ENST00000553753 PLA2R1Q13018 1463 aa15.53■□□□□ 0.08
HNRNPC-208ENST00000553753 LMTK2Q8IWU2 1503 aa15.52■□□□□ 0.08
HNRNPC-208ENST00000553753 PTPRTO14522 1441 aa15.52■□□□□ 0.08
HNRNPC-208ENST00000553753 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.07
HNRNPC-208ENST00000553753 PKD2Q13563 968 aa15.52■□□□□ 0.07
HNRNPC-208ENST00000553753 THEMISQ8N1K5 641 aaPredicted RBP15.52■□□□□ 0.07
HNRNPC-208ENST00000553753 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
HNRNPC-208ENST00000553753 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
HNRNPC-208ENST00000553753 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
HNRNPC-208ENST00000553753 UNC13BO14795 1591 aa15.46■□□□□ 0.07
HNRNPC-208ENST00000553753 ANKLE2Q86XL3 938 aa15.46■□□□□ 0.07
HNRNPC-208ENST00000553753 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
HNRNPC-208ENST00000553753 RPRD2Q5VT52 1461 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-208ENST00000553753 NUP155O75694 1391 aa15.44■□□□□ 0.06
HNRNPC-208ENST00000553753 NOS1P29475 1434 aa15.43■□□□□ 0.06
HNRNPC-208ENST00000553753 IDI1Q13907 227 aa15.43■□□□□ 0.06
HNRNPC-208ENST00000553753 NAIPQ13075 1403 aa15.42■□□□□ 0.06
HNRNPC-208ENST00000553753 TET3O43151 1660 aa15.42■□□□□ 0.06
HNRNPC-208ENST00000553753 FBXO41Q8TF61 875 aa15.41■□□□□ 0.06
HNRNPC-208ENST00000553753 SLC52A1Q9NWF4 448 aa15.41■□□□□ 0.06
HNRNPC-208ENST00000553753 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
HNRNPC-208ENST00000553753 UBR1Q8IWV7 1749 aa15.41■□□□□ 0.06
HNRNPC-208ENST00000553753 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-208ENST00000553753 IQGAP3Q86VI3 1631 aa15.4■□□□□ 0.06
HNRNPC-208ENST00000553753 SYNMO15061 1565 aa15.4■□□□□ 0.06
HNRNPC-208ENST00000553753 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
HNRNPC-208ENST00000553753 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
HNRNPC-208ENST00000553753 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
HNRNPC-208ENST00000553753 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
HNRNPC-208ENST00000553753 MED14O60244 1454 aa15.39■□□□□ 0.05
HNRNPC-208ENST00000553753 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-208ENST00000553753 LTBP4Q8N2S1 1624 aa15.37■□□□□ 0.05
HNRNPC-208ENST00000553753 NPHP4O75161 1426 aaPredicted RBP15.37■□□□□ 0.05
HNRNPC-208ENST00000553753 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
HNRNPC-208ENST00000553753 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 E9PCH4 1651 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 SLIT1O75093 1534 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 ARHGAP23Q9P227 1491 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 LTKP29376 864 aa15.36■□□□□ 0.05
HNRNPC-208ENST00000553753 SCAF11Q99590 1463 aaKnown RBP15.35■□□□□ 0.05
HNRNPC-208ENST00000553753 TRIM52Q96A61 297 aa15.33■□□□□ 0.04
HNRNPC-208ENST00000553753 IQGAP1P46940 1657 aa15.33■□□□□ 0.04
HNRNPC-208ENST00000553753 ADGRB3O60242 1522 aa15.32■□□□□ 0.04
HNRNPC-208ENST00000553753 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
HNRNPC-208ENST00000553753 CHGAP10645 457 aaKnown RBP15.29■□□□□ 0.04
HNRNPC-208ENST00000553753 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
HNRNPC-208ENST00000553753 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-208ENST00000553753 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
HNRNPC-208ENST00000553753 CPS1P31327 1500 aa15.27■□□□□ 0.03
HNRNPC-208ENST00000553753 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
HNRNPC-208ENST00000553753 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
HNRNPC-208ENST00000553753 ZFYVE9O95405 1425 aa15.25■□□□□ 0.03
HNRNPC-208ENST00000553753 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
HNRNPC-208ENST00000553753 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms