RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZMYM3Q14202 1370 aa31.43■■■□□ 2.62
FOXA1-203ENST00000553751 KDM5DQ9BY66 1539 aa31.42■■■□□ 2.62
FOXA1-203ENST00000553751 ADGRL2O95490 1459 aa31.4■■■□□ 2.62
FOXA1-203ENST00000553751 ERBINQ96RT1 1412 aa31.39■■■□□ 2.62
FOXA1-203ENST00000553751 RRP7BPQ9NSQ0 103 aa31.38■■■□□ 2.61
FOXA1-203ENST00000553751 CHIC2Q9UKJ5 165 aa31.38■■■□□ 2.61
FOXA1-203ENST00000553751 ANKRD30AQ9BXX3 1397 aa31.38■■■□□ 2.61
FOXA1-203ENST00000553751 NPATQ14207 1427 aa31.38■■■□□ 2.61
FOXA1-203ENST00000553751 MROH1Q8NDA8 1641 aa31.38■■■□□ 2.61
FOXA1-203ENST00000553751 NCOA1Q15788 1441 aa31.37■■■□□ 2.61
FOXA1-203ENST00000553751 SETD1BQ9UPS6 1966 aaKnown RBP31.36■■■□□ 2.61
FOXA1-203ENST00000553751 UHRF1BP1Q6BDS2 1440 aa31.34■■■□□ 2.61
FOXA1-203ENST00000553751 PTPRKQ15262 1439 aa31.33■■■□□ 2.61
FOXA1-203ENST00000553751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.31■■■□□ 2.6
FOXA1-203ENST00000553751 HSPA2P54652 639 aa31.31■■■□□ 2.6
FOXA1-203ENST00000553751 ZC3H13Q5T200 1668 aaKnown RBP31.31■■■□□ 2.6
FOXA1-203ENST00000553751 WASHC2CQ9Y4E1 1318 aa31.3■■■□□ 2.6
FOXA1-203ENST00000553751 ABCC3O15438 1527 aa31.3■■■□□ 2.6
FOXA1-203ENST00000553751 PRDM15P57071 1507 aaPredicted RBP31.29■■■□□ 2.6
FOXA1-203ENST00000553751 DEPDC5O75140 1603 aa31.27■■■□□ 2.6
FOXA1-203ENST00000553751 PZPP20742 1482 aa31.27■■■□□ 2.6
FOXA1-203ENST00000553751 RRBP1Q9P2E9 1410 aaKnown RBP31.26■■■□□ 2.6
FOXA1-203ENST00000553751 MYO3AQ8NEV4 1616 aa31.24■■■□□ 2.59
FOXA1-203ENST00000553751 CEP152O94986 1710 aa31.22■■■□□ 2.59
FOXA1-203ENST00000553751 ROCK1Q13464 1354 aa31.2■■■□□ 2.59
FOXA1-203ENST00000553751 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
FOXA1-203ENST00000553751 CAMSAP1Q5T5Y3 1602 aa31.19■■■□□ 2.58
FOXA1-203ENST00000553751 ANKRD50Q9ULJ7 1429 aa31.18■■■□□ 2.58
FOXA1-203ENST00000553751 FBXO31Q5XUX0 539 aaPredicted RBP31.16■■■□□ 2.58
FOXA1-203ENST00000553751 VWDEQ8N2E2 1590 aa31.16■■■□□ 2.58
FOXA1-203ENST00000553751 CEP170BQ9Y4F5 1589 aaPredicted RBP31.15■■■□□ 2.58
FOXA1-203ENST00000553751 ITGAEP38570 1179 aa31.14■■■□□ 2.58
FOXA1-203ENST00000553751 TNRQ92752 1358 aa31.13■■■□□ 2.57
FOXA1-203ENST00000553751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.11■■■□□ 2.573e-7■□□□□ 8.7
FOXA1-203ENST00000553751 STRCQ7RTU9 1775 aa31.1■■■□□ 2.57
FOXA1-203ENST00000553751 SPATA31D1Q6ZQQ2 1576 aa31.1■■■□□ 2.57
FOXA1-203ENST00000553751 LMTK2Q8IWU2 1503 aa31.1■■■□□ 2.57
FOXA1-203ENST00000553751 KANK1Q14678 1352 aa31.1■■■□□ 2.57
FOXA1-203ENST00000553751 A2ML1A8K2U0 1454 aa31.08■■■□□ 2.57
FOXA1-203ENST00000553751 ERVK-7P63135 1459 aa31.08■■■□□ 2.57
FOXA1-203ENST00000553751 ARHGAP31Q2M1Z3 1444 aa31.08■■■□□ 2.57
FOXA1-203ENST00000553751 UNC13BO14795 1591 aa31.05■■■□□ 2.56
FOXA1-203ENST00000553751 NLRP1Q9C000 1473 aa31.03■■■□□ 2.56
FOXA1-203ENST00000553751 EFCAB6Q5THR3 1501 aa31.01■■■□□ 2.55
FOXA1-203ENST00000553751 PLA2R1Q13018 1463 aa31■■■□□ 2.55
FOXA1-203ENST00000553751 CFAP65Q6ZU64 1925 aaKnown RBP30.96■■■□□ 2.55
FOXA1-203ENST00000553751 TET3O43151 1660 aa30.93■■■□□ 2.54
FOXA1-203ENST00000553751 UGGT1Q9NYU2 1555 aa30.93■■■□□ 2.54
FOXA1-203ENST00000553751 GCC2Q8IWJ2 1684 aa30.93■■■□□ 2.54
FOXA1-203ENST00000553751 PTPRTO14522 1441 aa30.92■■■□□ 2.54
FOXA1-203ENST00000553751 DMRT2Q9Y5R5 561 aa30.92■■■□□ 2.54
FOXA1-203ENST00000553751 IQGAP3Q86VI3 1631 aa30.91■■■□□ 2.54
FOXA1-203ENST00000553751 NAIPQ13075 1403 aa30.9■■■□□ 2.54
FOXA1-203ENST00000553751 RPRD2Q5VT52 1461 aaKnown RBP30.89■■■□□ 2.53
FOXA1-203ENST00000553751 SYNMO15061 1565 aa30.88■■■□□ 2.53
FOXA1-203ENST00000553751 NCKAP5LQ9HCH0 1330 aa30.87■■■□□ 2.53
FOXA1-203ENST00000553751 HFM1A2PYH4 1435 aa30.87■■■□□ 2.53
FOXA1-203ENST00000553751 NOS1P29475 1434 aa30.87■■■□□ 2.53
FOXA1-203ENST00000553751 UBR1Q8IWV7 1749 aa30.85■■■□□ 2.53
FOXA1-203ENST00000553751 PKD2Q13563 968 aa30.85■■■□□ 2.53
FOXA1-203ENST00000553751 NUP155O75694 1391 aa30.84■■■□□ 2.53
FOXA1-203ENST00000553751 THEMISQ8N1K5 641 aaPredicted RBP30.83■■■□□ 2.53
FOXA1-203ENST00000553751 POLR1AO95602 1720 aaPredicted RBP30.83■■■□□ 2.53
FOXA1-203ENST00000553751 E9PCH4 1651 aa30.81■■■□□ 2.52
FOXA1-203ENST00000553751 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
FOXA1-203ENST00000553751 NEURL4Q96JN8 1562 aa30.81■■■□□ 2.52
FOXA1-203ENST00000553751 KDM5AP29375 1690 aaKnown RBP30.74■■■□□ 2.51
FOXA1-203ENST00000553751 ARHGAP23Q9P227 1491 aa30.72■■■□□ 2.51
FOXA1-203ENST00000553751 IDI1Q13907 227 aa30.72■■■□□ 2.51
FOXA1-203ENST00000553751 ANKLE2Q86XL3 938 aa30.72■■■□□ 2.51
FOXA1-203ENST00000553751 SLIT1O75093 1534 aa30.72■■■□□ 2.51
FOXA1-203ENST00000553751 MED14O60244 1454 aa30.7■■■□□ 2.51
FOXA1-203ENST00000553751 ADGRB3O60242 1522 aa30.7■■■□□ 2.51
FOXA1-203ENST00000553751 SLC52A1Q9NWF4 448 aa30.69■■■□□ 2.5
FOXA1-203ENST00000553751 LTBP4Q8N2S1 1624 aa30.67■■■□□ 2.5
FOXA1-203ENST00000553751 NPHP4O75161 1426 aaPredicted RBP30.66■■■□□ 2.5
FOXA1-203ENST00000553751 SCAF11Q99590 1463 aaKnown RBP30.64■■■□□ 2.5
FOXA1-203ENST00000553751 IQGAP1P46940 1657 aa30.64■■■□□ 2.5
FOXA1-203ENST00000553751 TMEM2Q9UHN6 1383 aa30.64■■■□□ 2.5
FOXA1-203ENST00000553751 STAG3Q9UJ98 1225 aa30.63■■■□□ 2.49
FOXA1-203ENST00000553751 CERKQ8TCT0 537 aa30.62■■■□□ 2.49
FOXA1-203ENST00000553751 ZNF335Q9H4Z2 1342 aaPredicted RBP30.61■■■□□ 2.49
FOXA1-203ENST00000553751 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
FOXA1-203ENST00000553751 TMEM131LA2VDJ0 1609 aa30.59■■■□□ 2.49
FOXA1-203ENST00000553751 LTKP29376 864 aa30.59■■■□□ 2.49
FOXA1-203ENST00000553751 ILDR1Q86SU0 546 aaPredicted RBP30.57■■■□□ 2.48
FOXA1-203ENST00000553751 TRIM52Q96A61 297 aa30.57■■■□□ 2.48
FOXA1-203ENST00000553751 MYO5BQ9ULV0 1848 aa30.57■■■□□ 2.48
FOXA1-203ENST00000553751 TXNDC2Q86VQ3 553 aa30.55■■■□□ 2.48
FOXA1-203ENST00000553751 EID1Q9Y6B2 187 aa30.53■■■□□ 2.48
FOXA1-203ENST00000553751 FBXO41Q8TF61 875 aa30.52■■■□□ 2.48
FOXA1-203ENST00000553751 TRPM2O94759 1503 aa30.52■■■□□ 2.48
FOXA1-203ENST00000553751 ZFYVE9O95405 1425 aa30.51■■■□□ 2.47
FOXA1-203ENST00000553751 SETD5Q9C0A6 1442 aa30.51■■■□□ 2.47
FOXA1-203ENST00000553751 SLC4A1APQ9BWU0 796 aaKnown RBP30.48■■■□□ 2.47
FOXA1-203ENST00000553751 CLTCL1P53675 1640 aa30.47■■■□□ 2.47
FOXA1-203ENST00000553751 IQSEC2Q5JU85 1478 aa30.47■■■□□ 2.47
FOXA1-203ENST00000553751 RIMS2Q9UQ26 1411 aa30.46■■■□□ 2.47
FOXA1-203ENST00000553751 CPS1P31327 1500 aa30.44■■■□□ 2.46
FOXA1-203ENST00000553751 CHGAP10645 457 aaKnown RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms