RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 KIF3BO15066 747 aa27.08■■□□□ 1.93
PSEN1-208ENST00000553719 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
PSEN1-208ENST00000553719 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
PSEN1-208ENST00000553719 KDM5DQ9BY66 1539 aa27.06■■□□□ 1.92
PSEN1-208ENST00000553719 ADAMTSL3P82987 1691 aa27.05■■□□□ 1.92
PSEN1-208ENST00000553719 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
PSEN1-208ENST00000553719 ARID4BQ4LE39 1312 aaPredicted RBP27.03■■□□□ 1.92
PSEN1-208ENST00000553719 IQGAP3Q86VI3 1631 aa27.01■■□□□ 1.92
PSEN1-208ENST00000553719 ZC3H13Q5T200 1668 aaKnown RBP27.01■■□□□ 1.91
PSEN1-208ENST00000553719 HRCP23327 699 aa27■■□□□ 1.91
PSEN1-208ENST00000553719 ABCC3O15438 1527 aa27■■□□□ 1.91
PSEN1-208ENST00000553719 LMTK2Q8IWU2 1503 aa26.99■■□□□ 1.91
PSEN1-208ENST00000553719 GGT6Q6P531 493 aa26.98■■□□□ 1.91
PSEN1-208ENST00000553719 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
PSEN1-208ENST00000553719 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
PSEN1-208ENST00000553719 MADDQ8WXG6 1647 aa26.97■■□□□ 1.91
PSEN1-208ENST00000553719 CEP152O94986 1710 aa26.96■■□□□ 1.91
PSEN1-208ENST00000553719 MLECQ14165 292 aa26.95■■□□□ 1.9
PSEN1-208ENST00000553719 PZPP20742 1482 aa26.94■■□□□ 1.9
PSEN1-208ENST00000553719 CLTCQ00610 1675 aaKnown RBP26.94■■□□□ 1.9
PSEN1-208ENST00000553719 MROH2AA6NES4 1674 aa26.93■■□□□ 1.9
PSEN1-208ENST00000553719 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
PSEN1-208ENST00000553719 NUP155O75694 1391 aa26.92■■□□□ 1.9
PSEN1-208ENST00000553719 TET3O43151 1660 aa26.92■■□□□ 1.9
PSEN1-208ENST00000553719 CAMSAP1Q5T5Y3 1602 aa26.91■■□□□ 1.9
PSEN1-208ENST00000553719 KANK1Q14678 1352 aa26.91■■□□□ 1.9
PSEN1-208ENST00000553719 CNTLNQ9NXG0 1405 aa26.9■■□□□ 1.9
PSEN1-208ENST00000553719 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
PSEN1-208ENST00000553719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.89■■□□□ 1.92e-7■□□□□ 10.6
PSEN1-208ENST00000553719 RIMS1Q86UR5 1692 aaKnown RBP26.88■■□□□ 1.89
PSEN1-208ENST00000553719 WASHC2CQ9Y4E1 1318 aa26.87■■□□□ 1.89
PSEN1-208ENST00000553719 ARHGAP31Q2M1Z3 1444 aa26.85■■□□□ 1.89
PSEN1-208ENST00000553719 E9PCH4 1651 aa26.83■■□□□ 1.89
PSEN1-208ENST00000553719 KDM4FA0A1W2PPD8 638 aa26.82■■□□□ 1.88
PSEN1-208ENST00000553719 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
PSEN1-208ENST00000553719 C3P01024 1663 aa26.82■■□□□ 1.88
PSEN1-208ENST00000553719 NPATQ14207 1427 aa26.81■■□□□ 1.88
PSEN1-208ENST00000553719 RPRD2Q5VT52 1461 aaKnown RBP26.8■■□□□ 1.88
PSEN1-208ENST00000553719 ZMYM3Q14202 1370 aa26.79■■□□□ 1.88
PSEN1-208ENST00000553719 PTPRMP28827 1452 aa26.78■■□□□ 1.88
PSEN1-208ENST00000553719 MPHOSPH9Q99550 1183 aa26.76■■□□□ 1.87
PSEN1-208ENST00000553719 ESF1Q9H501 851 aaKnown RBP26.75■■□□□ 1.87
PSEN1-208ENST00000553719 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
PSEN1-208ENST00000553719 SLC4A1APQ9BWU0 796 aaKnown RBP26.74■■□□□ 1.87
PSEN1-208ENST00000553719 SPATA31D1Q6ZQQ2 1576 aa26.74■■□□□ 1.87
PSEN1-208ENST00000553719 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
PSEN1-208ENST00000553719 NOS1P29475 1434 aa26.72■■□□□ 1.87
PSEN1-208ENST00000553719 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
PSEN1-208ENST00000553719 PKD2Q13563 968 aa26.7■■□□□ 1.86
PSEN1-208ENST00000553719 PTPRTO14522 1441 aa26.7■■□□□ 1.86
PSEN1-208ENST00000553719 SPHKAPQ2M3C7 1700 aa26.68■■□□□ 1.86
PSEN1-208ENST00000553719 SYNMO15061 1565 aa26.68■■□□□ 1.86
PSEN1-208ENST00000553719 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
PSEN1-208ENST00000553719 CEBPAP49715 358 aaPredicted RBP26.67■■□□□ 1.86
PSEN1-208ENST00000553719 TRPM2O94759 1503 aa26.65■■□□□ 1.86
PSEN1-208ENST00000553719 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
PSEN1-208ENST00000553719 CFAP65Q6ZU64 1925 aaKnown RBP26.64■■□□□ 1.86
PSEN1-208ENST00000553719 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
PSEN1-208ENST00000553719 FOXD1Q16676 465 aa26.61■■□□□ 1.85
PSEN1-208ENST00000553719 ANKRD30BQ9BXX2 1392 aa26.59■■□□□ 1.85
PSEN1-208ENST00000553719 TNRQ92752 1358 aa26.58■■□□□ 1.85
PSEN1-208ENST00000553719 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
PSEN1-208ENST00000553719 UGGT1Q9NYU2 1555 aa26.57■■□□□ 1.84
PSEN1-208ENST00000553719 CLTCL1P53675 1640 aa26.56■■□□□ 1.84
PSEN1-208ENST00000553719 SETD1BQ9UPS6 1966 aaKnown RBP26.55■■□□□ 1.84
PSEN1-208ENST00000553719 NLRP1Q9C000 1473 aa26.53■■□□□ 1.84
PSEN1-208ENST00000553719 ZNF142P52746 1687 aaPredicted RBP26.53■■□□□ 1.84
PSEN1-208ENST00000553719 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
PSEN1-208ENST00000553719 KDM5AP29375 1690 aaKnown RBP26.48■■□□□ 1.83
PSEN1-208ENST00000553719 SLC52A1Q9NWF4 448 aa26.48■■□□□ 1.83
PSEN1-208ENST00000553719 CEP170BQ9Y4F5 1589 aaPredicted RBP26.48■■□□□ 1.83
PSEN1-208ENST00000553719 A2ML1A8K2U0 1454 aa26.47■■□□□ 1.83
PSEN1-208ENST00000553719 CCDC144AA2RUR9 1427 aa26.47■■□□□ 1.83
PSEN1-208ENST00000553719 ADGRB3O60242 1522 aa26.46■■□□□ 1.83
PSEN1-208ENST00000553719 NEURL4Q96JN8 1562 aa26.46■■□□□ 1.83
PSEN1-208ENST00000553719 IDI1Q13907 227 aa26.45■■□□□ 1.82
PSEN1-208ENST00000553719 TMEM131LA2VDJ0 1609 aa26.45■■□□□ 1.82
PSEN1-208ENST00000553719 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.82
PSEN1-208ENST00000553719 UHRF1BP1Q6BDS2 1440 aa26.43■■□□□ 1.82
PSEN1-208ENST00000553719 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
PSEN1-208ENST00000553719 KIF1BO60333 1816 aa26.42■■□□□ 1.82
PSEN1-208ENST00000553719 SPATA31E1Q6ZUB1 1445 aa26.41■■□□□ 1.82
PSEN1-208ENST00000553719 LMTK3Q96Q04 1460 aa26.4■■□□□ 1.82
PSEN1-208ENST00000553719 MYO5BQ9ULV0 1848 aa26.39■■□□□ 1.82
PSEN1-208ENST00000553719 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
PSEN1-208ENST00000553719 SIN3AQ96ST3 1273 aa26.33■■□□□ 1.81
PSEN1-208ENST00000553719 ARHGAP23Q9P227 1491 aa26.32■■□□□ 1.8
PSEN1-208ENST00000553719 SLIT1O75093 1534 aa26.32■■□□□ 1.8
PSEN1-208ENST00000553719 IFT172Q9UG01 1749 aa26.3■■□□□ 1.8
PSEN1-208ENST00000553719 ZFYVE9O95405 1425 aa26.29■■□□□ 1.8
PSEN1-208ENST00000553719 NEXMIFQ5QGS0 1516 aa26.29■■□□□ 1.8
PSEN1-208ENST00000553719 PPLO60437 1756 aa26.26■■□□□ 1.79
PSEN1-208ENST00000553719 TMEM2Q9UHN6 1383 aa26.26■■□□□ 1.79
PSEN1-208ENST00000553719 THEMISQ8N1K5 641 aaPredicted RBP26.24■■□□□ 1.79
PSEN1-208ENST00000553719 CHGAP10645 457 aaKnown RBP26.23■■□□□ 1.79
PSEN1-208ENST00000553719 STAG3Q9UJ98 1225 aa26.22■■□□□ 1.79
PSEN1-208ENST00000553719 RIMS2Q9UQ26 1411 aa26.22■■□□□ 1.79
PSEN1-208ENST00000553719 RPGRIP1LQ68CZ1 1315 aa26.2■■□□□ 1.79
PSEN1-208ENST00000553719 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
PSEN1-208ENST00000553719 MYOM2P54296 1465 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms